RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GPBP1L1Q9HC44 474 aaPredicted RBP13.67□□□□□ -0.22
TRAFD1-207ENST00000550051 TMOD3Q9NYL9 352 aa13.67□□□□□ -0.22
TRAFD1-207ENST00000550051 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
TRAFD1-207ENST00000550051 ASAP1Q9ULH1 1129 aa13.67□□□□□ -0.22
TRAFD1-207ENST00000550051 IGSF1Q8N6C5 1336 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 PHF14O94880 888 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 PHKG2P15735 406 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 ITPK1Q13572 414 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 ATG3Q9NT62 314 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 TIMELESSQ9UNS1 1208 aa13.66□□□□□ -0.22
TRAFD1-207ENST00000550051 ATP6V1AP38606 617 aa13.65□□□□□ -0.22
TRAFD1-207ENST00000550051 IFFO2Q5TF58 517 aa13.65□□□□□ -0.22
TRAFD1-207ENST00000550051 PLEKHG2Q9H7P9 1386 aa13.65□□□□□ -0.22
TRAFD1-207ENST00000550051 ATXN8OSP0DMR3 200 aa13.64□□□□□ -0.23
TRAFD1-207ENST00000550051 CEP350Q5VT06 3117 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 GNPATO15228 680 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 HSPA6P17066 643 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 TGFB2P61812 414 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 RC3H1Q5TC82 1133 aaKnown RBP13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 NLGN1Q8N2Q7 840 aa13.63□□□□□ -0.23
TRAFD1-207ENST00000550051 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
TRAFD1-207ENST00000550051 ZNF831Q5JPB2 1677 aa13.62□□□□□ -0.23
TRAFD1-207ENST00000550051 KIF13BQ9NQT8 1826 aa13.62□□□□□ -0.23
TRAFD1-207ENST00000550051 MMP10P09238 476 aa13.61□□□□□ -0.23
TRAFD1-207ENST00000550051 EIF4A2Q14240 407 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-207ENST00000550051 RTCBQ9Y3I0 505 aaKnown RBP13.61□□□□□ -0.23
TRAFD1-207ENST00000550051 HSP90AB1P08238 724 aaKnown RBP13.6□□□□□ -0.23
TRAFD1-207ENST00000550051 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
TRAFD1-207ENST00000550051 DCAF5Q96JK2 942 aa13.6□□□□□ -0.23
TRAFD1-207ENST00000550051 SLC4A9Q96Q91 983 aa13.6□□□□□ -0.23
TRAFD1-207ENST00000550051 KIF3CO14782 793 aa13.59□□□□□ -0.23
TRAFD1-207ENST00000550051 TRIM26Q12899 539 aaPredicted RBP13.59□□□□□ -0.23
TRAFD1-207ENST00000550051 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
TRAFD1-207ENST00000550051 KDRP35968 1356 aa13.58□□□□□ -0.23
TRAFD1-207ENST00000550051 CICQ96RK0 1608 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-207ENST00000550051 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
TRAFD1-207ENST00000550051 PLEKHO1Q53GL0 409 aaPredicted RBP13.58□□□□□ -0.24
TRAFD1-207ENST00000550051 WWC3Q9ULE0 1092 aa13.58□□□□□ -0.24
TRAFD1-207ENST00000550051 PXDNLA1KZ92 1463 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 KIAA1551Q9HCM1 1747 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 A0A0G2JLW4 131 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 GYS1P13807 737 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 AMOTQ4VCS5 1084 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 RBM42Q9BTD8 480 aaKnown RBP13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
TRAFD1-207ENST00000550051 N4BP2Q86UW6 1770 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-207ENST00000550051 RFC4P35249 363 aa13.56□□□□□ -0.24
TRAFD1-207ENST00000550051 TNNT2P45379 298 aaPredicted RBP13.56□□□□□ -0.24
TRAFD1-207ENST00000550051 MYH14Q7Z406 1995 aaKnown RBP13.55□□□□□ -0.24
TRAFD1-207ENST00000550051 CABP4P57796 275 aa13.55□□□□□ -0.24
TRAFD1-207ENST00000550051 CCDC87Q9NVE4 849 aa13.55□□□□□ -0.24
TRAFD1-207ENST00000550051 BCS1LQ9Y276 419 aa13.55□□□□□ -0.24
TRAFD1-207ENST00000550051 COL5A3P25940 1745 aaPredicted RBP13.55□□□□□ -0.24
TRAFD1-207ENST00000550051 TOMM70O94826 608 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 KCNA3P22001 575 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 MTHFSP49914 203 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 ARHGAP27Q6ZUM4 889 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 PARP3Q9Y6F1 533 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 CLSPNQ9HAW4 1339 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 C10orf71Q711Q0 1435 aa13.54□□□□□ -0.24
TRAFD1-207ENST00000550051 BRCA1P38398 1863 aaKnown RBP13.53□□□□□ -0.24
TRAFD1-207ENST00000550051 DPEP1P16444 411 aa13.53□□□□□ -0.24
TRAFD1-207ENST00000550051 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
TRAFD1-207ENST00000550051 PANK3Q9H999 370 aa13.53□□□□□ -0.24
TRAFD1-207ENST00000550051 C4AP0C0L4 1744 aa13.53□□□□□ -0.24
TRAFD1-207ENST00000550051 FCHSD2O94868 740 aa13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 APLP1P51693 650 aa13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 SAMD1Q6SPF0 538 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 DNAJC5GQ8N7S2 189 aa13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 NFATC2IPQ8NCF5 419 aa13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 KDM6AO15550 1401 aaPredicted RBP13.52□□□□□ -0.25
TRAFD1-207ENST00000550051 PTCD1O75127 700 aaKnown RBP13.51□□□□□ -0.25
TRAFD1-207ENST00000550051 C1orf141Q5JVX7 400 aa13.51□□□□□ -0.25
TRAFD1-207ENST00000550051 POLR3GLQ9BT43 218 aa13.51□□□□□ -0.25
TRAFD1-207ENST00000550051 PIM2Q9P1W9 311 aa13.51□□□□□ -0.25
TRAFD1-207ENST00000550051 ARFGEF1Q9Y6D6 1849 aa13.5□□□□□ -0.25
TRAFD1-207ENST00000550051 CRKLP46109 303 aaKnown RBP13.5□□□□□ -0.25
TRAFD1-207ENST00000550051 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
TRAFD1-207ENST00000550051 USP42Q9H9J4 1324 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 TM4SF1P30408 202 aa13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 FKBP8Q14318 412 aa13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 INTS5Q6P9B9 1019 aaKnown RBP13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 MORC1Q86VD1 984 aa13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 AEBP1Q8IUX7 1158 aa13.49□□□□□ -0.25
TRAFD1-207ENST00000550051 C9orf131Q5VYM1 1079 aa13.48□□□□□ -0.25
TRAFD1-207ENST00000550051 SULT6B1Q6IMI4 303 aa13.48□□□□□ -0.25
TRAFD1-207ENST00000550051 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
TRAFD1-207ENST00000550051 NMRK2Q9NPI5 230 aa13.48□□□□□ -0.25
TRAFD1-207ENST00000550051 IL13P35225 146 aa13.47□□□□□ -0.25
TRAFD1-207ENST00000550051 DDR1Q08345 913 aa13.47□□□□□ -0.25
TRAFD1-207ENST00000550051 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-207ENST00000550051 SRP68Q9UHB9 627 aaKnown RBP13.47□□□□□ -0.25
TRAFD1-207ENST00000550051 SCN11AQ9UI33 1791 aa13.47□□□□□ -0.25
TRAFD1-207ENST00000550051 HSPA5P11021 654 aaKnown RBP13.46□□□□□ -0.25
TRAFD1-207ENST00000550051 AKAP4Q5JQC9 854 aa13.46□□□□□ -0.25
TRAFD1-207ENST00000550051 RNF39Q9H2S5 420 aa13.46□□□□□ -0.25
TRAFD1-207ENST00000550051 SBF1O95248 1867 aa13.46□□□□□ -0.26
TRAFD1-207ENST00000550051 TJP1Q07157 1748 aa13.45□□□□□ -0.26
TRAFD1-207ENST00000550051 ADAMTS7Q9UKP4 1686 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms