RNA–Protein interactions for RNA: ENST00000549941.5

PFKM-217, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 594 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-217ENST00000549941 ITPK1Q13572 414 aa16.34■□□□□ 0.21
PFKM-217ENST00000549941 KDRP35968 1356 aa16.34■□□□□ 0.21
PFKM-217ENST00000549941 C10orf71Q711Q0 1435 aa16.34■□□□□ 0.21
PFKM-217ENST00000549941 ARFGEF1Q9Y6D6 1849 aa16.33■□□□□ 0.21
PFKM-217ENST00000549941 ASAP1Q9ULH1 1129 aa16.33■□□□□ 0.2
PFKM-217ENST00000549941 WASHC2AQ641Q2 1341 aa16.33■□□□□ 0.2
PFKM-217ENST00000549941 MMP10P09238 476 aa16.32■□□□□ 0.2
PFKM-217ENST00000549941 ATP6V1AP38606 617 aa16.32■□□□□ 0.2
PFKM-217ENST00000549941 CARD14Q9BXL6 1004 aa16.32■□□□□ 0.2
PFKM-217ENST00000549941 PHKG2P15735 406 aa16.31■□□□□ 0.2
PFKM-217ENST00000549941 TGFB2P61812 414 aa16.31■□□□□ 0.2
PFKM-217ENST00000549941 IFNL2Q8IZJ0 200 aa16.31■□□□□ 0.2
PFKM-217ENST00000549941 WDR90Q96KV7 1748 aa16.31■□□□□ 0.2
PFKM-217ENST00000549941 MYH14Q7Z406 1995 aaKnown RBP16.3■□□□□ 0.2
PFKM-217ENST00000549941 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
PFKM-217ENST00000549941 APLP1P51693 650 aa16.3■□□□□ 0.2
PFKM-217ENST00000549941 EYA1Q99502 592 aa16.3■□□□□ 0.2
PFKM-217ENST00000549941 ATG3Q9NT62 314 aa16.3■□□□□ 0.2
PFKM-217ENST00000549941 RTCBQ9Y3I0 505 aaKnown RBP16.29■□□□□ 0.2
PFKM-217ENST00000549941 TOMM70O94826 608 aa16.28■□□□□ 0.2
PFKM-217ENST00000549941 ADRA2BP18089 450 aa16.28■□□□□ 0.2
PFKM-217ENST00000549941 NLGN1Q8N2Q7 840 aa16.28■□□□□ 0.2
PFKM-217ENST00000549941 CNTNAP4Q9C0A0 1308 aa16.27■□□□□ 0.2
PFKM-217ENST00000549941 TRAPPC3LQ5T215 181 aa16.27■□□□□ 0.2
PFKM-217ENST00000549941 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
PFKM-217ENST00000549941 CCDC87Q9NVE4 849 aa16.26■□□□□ 0.19
PFKM-217ENST00000549941 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
PFKM-217ENST00000549941 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
PFKM-217ENST00000549941 POLKQ9UBT6 870 aa16.25■□□□□ 0.19
PFKM-217ENST00000549941 TNRC6CQ9HCJ0 1690 aaKnown RBP16.24■□□□□ 0.19
PFKM-217ENST00000549941 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
PFKM-217ENST00000549941 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
PFKM-217ENST00000549941 ARHGEF1Q92888 912 aaKnown RBP16.24■□□□□ 0.19
PFKM-217ENST00000549941 SBF1O95248 1867 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 TJP1Q07157 1748 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
PFKM-217ENST00000549941 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
PFKM-217ENST00000549941 GYS1P13807 737 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 DPEP1P16444 411 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 EIF4A2Q14240 407 aaKnown RBP16.23■□□□□ 0.19
PFKM-217ENST00000549941 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 NMRK2Q9NPI5 230 aa16.23■□□□□ 0.19
PFKM-217ENST00000549941 RPS6KA4O75676 772 aa16.22■□□□□ 0.19
PFKM-217ENST00000549941 FCHSD2O94868 740 aa16.22■□□□□ 0.19
PFKM-217ENST00000549941 RFC4P35249 363 aa16.22■□□□□ 0.19
PFKM-217ENST00000549941 DCAF5Q96JK2 942 aa16.22■□□□□ 0.19
PFKM-217ENST00000549941 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
PFKM-217ENST00000549941 PARP3Q9Y6F1 533 aa16.22■□□□□ 0.19
PFKM-217ENST00000549941 RBM46Q8TBY0 533 aaKnown RBP16.21■□□□□ 0.19
PFKM-217ENST00000549941 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.18
PFKM-217ENST00000549941 ADAMTS7Q9UKP4 1686 aa16.2■□□□□ 0.18
PFKM-217ENST00000549941 KCNA3P22001 575 aa16.19■□□□□ 0.18
PFKM-217ENST00000549941 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
PFKM-217ENST00000549941 VIRMAQ69YN4 1812 aaKnown RBP16.18■□□□□ 0.18
PFKM-217ENST00000549941 C9orf131Q5VYM1 1079 aa16.18■□□□□ 0.18
PFKM-217ENST00000549941 C16orf71Q8IYS4 520 aaPredicted RBP16.18■□□□□ 0.18
PFKM-217ENST00000549941 CABP4P57796 275 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 FSTL1Q12841 308 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 AMOTQ4VCS5 1084 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 PLEKHO1Q53GL0 409 aaPredicted RBP16.17■□□□□ 0.18
PFKM-217ENST00000549941 PIM2Q9P1W9 311 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 DLEC1Q9Y238 1755 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
PFKM-217ENST00000549941 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
PFKM-217ENST00000549941 USP42Q9H9J4 1324 aaKnown RBP16.17■□□□□ 0.18
PFKM-217ENST00000549941 ZNF530Q6P9A1 599 aaPredicted RBP16.16■□□□□ 0.18
PFKM-217ENST00000549941 TNNT2P45379 298 aaPredicted RBP16.15■□□□□ 0.18
PFKM-217ENST00000549941 CRKLP46109 303 aaKnown RBP16.15■□□□□ 0.18
PFKM-217ENST00000549941 DALRD3Q5D0E6 543 aaKnown RBP16.15■□□□□ 0.18
PFKM-217ENST00000549941 KLRG1Q96E93 195 aa16.15■□□□□ 0.18
PFKM-217ENST00000549941 NRXN2Q9P2S2 1712 aa16.14■□□□□ 0.17
PFKM-217ENST00000549941 DDR1Q08345 913 aa16.14■□□□□ 0.17
PFKM-217ENST00000549941 FKBP8Q14318 412 aa16.14■□□□□ 0.17
PFKM-217ENST00000549941 JMYQ8N9B5 988 aa16.14■□□□□ 0.17
PFKM-217ENST00000549941 RNF181Q9P0P0 153 aa16.14■□□□□ 0.17
PFKM-217ENST00000549941 SRP68Q9UHB9 627 aaKnown RBP16.14■□□□□ 0.17
PFKM-217ENST00000549941 PTCD1O75127 700 aaKnown RBP16.13■□□□□ 0.17
PFKM-217ENST00000549941 MTHFSP49914 203 aa16.13■□□□□ 0.17
PFKM-217ENST00000549941 C1orf141Q5JVX7 400 aa16.13■□□□□ 0.17
PFKM-217ENST00000549941 TIAM2Q8IVF5 1701 aa16.13■□□□□ 0.17
PFKM-217ENST00000549941 ZC3H4Q9UPT8 1303 aaKnown RBP16.13■□□□□ 0.17
PFKM-217ENST00000549941 CCDC88AQ3V6T2 1871 aa16.12■□□□□ 0.17
PFKM-217ENST00000549941 POLRMTO00411 1230 aaKnown RBP16.11■□□□□ 0.17
PFKM-217ENST00000549941 HTRA3P83110 453 aa16.11■□□□□ 0.17
PFKM-217ENST00000549941 MRC1P22897 1456 aa16.1■□□□□ 0.17
PFKM-217ENST00000549941 CHRNA5P30532 468 aa16.1■□□□□ 0.17
PFKM-217ENST00000549941 AEBP1Q8IUX7 1158 aa16.1■□□□□ 0.17
PFKM-217ENST00000549941 NFATC2IPQ8NCF5 419 aa16.1■□□□□ 0.17
PFKM-217ENST00000549941 INTS5Q6P9B9 1019 aaKnown RBP16.09■□□□□ 0.17
PFKM-217ENST00000549941 SMC1BQ8NDV3 1235 aa16.09■□□□□ 0.17
PFKM-217ENST00000549941 POLR3GLQ9BT43 218 aa16.09■□□□□ 0.17
PFKM-217ENST00000549941 TIMELESSQ9UNS1 1208 aa16.09■□□□□ 0.17
PFKM-217ENST00000549941 TM4SF1P30408 202 aa16.08■□□□□ 0.16
PFKM-217ENST00000549941 RRAGCQ9HB90 399 aa16.08■□□□□ 0.16
PFKM-217ENST00000549941 SOS1Q07889 1333 aaPredicted RBP16.08■□□□□ 0.16
PFKM-217ENST00000549941 PCNTO95613 3336 aa16.08■□□□□ 0.16
PFKM-217ENST00000549941 UBR2Q8IWV8 1755 aa16.08■□□□□ 0.16
PFKM-217ENST00000549941 ZPR1O75312 459 aa16.07■□□□□ 0.16
PFKM-217ENST00000549941 COL13A1Q5TAT6 717 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms