RNA–Protein interactions for RNA: ENST00000549874.1

KIRREL3-209, Transcript of kirre like nephrin family adhesion molecule 3, humanhuman

TSL 1 (best)

Gene KIRREL3, Length 1,507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIRREL3-209ENST00000549874 MIS18AQ9NYP9 233 aa21.11■□□□□ 0.97
KIRREL3-209ENST00000549874 MRC1P22897 1456 aa21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 CHL1O00533 1208 aa21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 KRT27Q7Z3Y8 459 aa21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 TRMT2AQ8IZ69 625 aaKnown RBP21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 TSR2Q969E8 191 aaKnown RBP21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 RGS12O14924 1447 aa21.1■□□□□ 0.97
KIRREL3-209ENST00000549874 FAM182BQ5T319 152 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 DUSP27Q5VZP5 1158 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 MBIPQ9NS73 344 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 ITGB4P16144 1822 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 DOT1LQ8TEK3 1739 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 FANCIQ9NVI1 1328 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 BTBD11A6QL63 1104 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
KIRREL3-209ENST00000549874 BABAM1Q9NWV8 329 aa21.08■□□□□ 0.96
KIRREL3-209ENST00000549874 PRIM1P49642 420 aaKnown RBP21.07■□□□□ 0.96
KIRREL3-209ENST00000549874 SYTL4Q96C24 671 aaPredicted RBP21.07■□□□□ 0.96
KIRREL3-209ENST00000549874 ACSBG1Q96GR2 724 aa21.07■□□□□ 0.96
KIRREL3-209ENST00000549874 TMOD3Q9NYL9 352 aa21.07■□□□□ 0.96
KIRREL3-209ENST00000549874 PIGBQ92521 554 aa21.04■□□□□ 0.96
KIRREL3-209ENST00000549874 BCL9O00512 1426 aa21.04■□□□□ 0.96
KIRREL3-209ENST00000549874 KDM3BQ7LBC6 1761 aa21.04■□□□□ 0.96
KIRREL3-209ENST00000549874 CENPBP07199 599 aaPredicted RBP21.04■□□□□ 0.96
KIRREL3-209ENST00000549874 KCNQ3O43525 872 aa21.03■□□□□ 0.96
KIRREL3-209ENST00000549874 SLC39A6Q13433 755 aa21.03■□□□□ 0.96
KIRREL3-209ENST00000549874 KCNQ2O43526 872 aa21.02■□□□□ 0.96
KIRREL3-209ENST00000549874 EXOSC9Q06265 439 aaKnown RBP21.02■□□□□ 0.96
KIRREL3-209ENST00000549874 FAM196AQ6ZSG2 479 aa21.02■□□□□ 0.96
KIRREL3-209ENST00000549874 SBF2Q86WG5 1849 aa21.02■□□□□ 0.95
KIRREL3-209ENST00000549874 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
KIRREL3-209ENST00000549874 TTC5Q8N0Z6 440 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 NHSQ6T4R5 1651 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 EP400Q96L91 3159 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 EIF4A1P60842 406 aaKnown RBP20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 KRT24Q2M2I5 525 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 C8orf58Q8NAV2 365 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 ASAP1Q9ULH1 1129 aa20.99■□□□□ 0.95
KIRREL3-209ENST00000549874 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
KIRREL3-209ENST00000549874 ATG3Q9NT62 314 aa20.98■□□□□ 0.95
KIRREL3-209ENST00000549874 ELL2O00472 640 aaPredicted RBP20.97■□□□□ 0.95
KIRREL3-209ENST00000549874 PTF1AQ7RTS3 328 aa20.97■□□□□ 0.95
KIRREL3-209ENST00000549874 TSPYL6Q8N831 410 aa20.97■□□□□ 0.95
KIRREL3-209ENST00000549874 TWISTNBQ3B726 338 aaPredicted RBP20.95■□□□□ 0.94
KIRREL3-209ENST00000549874 ZNF496Q96IT1 587 aaPredicted RBP20.95■□□□□ 0.94
KIRREL3-209ENST00000549874 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
KIRREL3-209ENST00000549874 BTAF1O14981 1849 aa20.95■□□□□ 0.94
KIRREL3-209ENST00000549874 FMNL2Q96PY5 1086 aa20.94■□□□□ 0.94
KIRREL3-209ENST00000549874 BCL11BQ9C0K0 894 aaPredicted RBP20.94■□□□□ 0.94
KIRREL3-209ENST00000549874 PTCD1O75127 700 aaKnown RBP20.94■□□□□ 0.94
KIRREL3-209ENST00000549874 TRIM37O94972 964 aa20.94■□□□□ 0.94
KIRREL3-209ENST00000549874 KCPQ6ZWJ8 1503 aa20.93■□□□□ 0.94
KIRREL3-209ENST00000549874 VAMP4O75379 141 aa20.93■□□□□ 0.94
KIRREL3-209ENST00000549874 CT47B1P0C2W7 299 aaPredicted RBP20.93■□□□□ 0.94
KIRREL3-209ENST00000549874 HEG1Q9ULI3 1381 aa20.92■□□□□ 0.94
KIRREL3-209ENST00000549874 GIGYF1O75420 1035 aaPredicted RBP20.91■□□□□ 0.94
KIRREL3-209ENST00000549874 SMARCC1Q92922 1105 aaPredicted RBP20.91■□□□□ 0.94
KIRREL3-209ENST00000549874 RBM42Q9BTD8 480 aaKnown RBP20.91■□□□□ 0.94
KIRREL3-209ENST00000549874 RCAN3Q9UKA8 241 aa20.9■□□□□ 0.94
KIRREL3-209ENST00000549874 PALLDQ8WX93 1383 aa20.9■□□□□ 0.94
KIRREL3-209ENST00000549874 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.94
KIRREL3-209ENST00000549874 SNRPA1P09661 255 aaKnown RBP20.89■□□□□ 0.94
KIRREL3-209ENST00000549874 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.94
KIRREL3-209ENST00000549874 HOXB7P09629 217 aa20.88■□□□□ 0.93
KIRREL3-209ENST00000549874 C5P01031 1676 aa20.88■□□□□ 0.93
KIRREL3-209ENST00000549874 ZNF428Q96B54 188 aa20.88■□□□□ 0.93
KIRREL3-209ENST00000549874 RARSP54136 660 aaKnown RBP20.87■□□□□ 0.93
KIRREL3-209ENST00000549874 VSIG10Q8N0Z9 540 aa20.87■□□□□ 0.93
KIRREL3-209ENST00000549874 EIF2S2P20042 333 aaKnown RBP20.86■□□□□ 0.93
KIRREL3-209ENST00000549874 HDGFL1Q5TGJ6 251 aa20.86■□□□□ 0.93
KIRREL3-209ENST00000549874 NECTIN2Q92692 538 aa20.86■□□□□ 0.93
KIRREL3-209ENST00000549874 SLC4A9Q96Q91 983 aa20.86■□□□□ 0.93
KIRREL3-209ENST00000549874 LOC102724428A0A0B4J2F2 783 aa20.85■□□□□ 0.93
KIRREL3-209ENST00000549874 TCERG1O14776 1098 aaKnown RBP20.85■□□□□ 0.93
KIRREL3-209ENST00000549874 SIK1P57059 783 aa20.85■□□□□ 0.93
KIRREL3-209ENST00000549874 USP16Q9Y5T5 823 aa20.85■□□□□ 0.93
KIRREL3-209ENST00000549874 SSH1Q8WYL5 1049 aa20.84■□□□□ 0.93
KIRREL3-209ENST00000549874 BCL2L13Q9BXK5 485 aa20.84■□□□□ 0.93
KIRREL3-209ENST00000549874 ATP6V1AP38606 617 aa20.83■□□□□ 0.93
KIRREL3-209ENST00000549874 ALDH1L2Q3SY69 923 aa20.83■□□□□ 0.93
KIRREL3-209ENST00000549874 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
KIRREL3-209ENST00000549874 LAMB4A4D0S4 1761 aa20.83■□□□□ 0.93
KIRREL3-209ENST00000549874 BCAR3O75815 825 aa20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 DNAJC10Q8IXB1 793 aa20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 TEX13AQ9BXU3 409 aaPredicted RBP20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 CHMP4AQ9BY43 222 aa20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 SMC4Q9NTJ3 1288 aa20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 LY75O60449 1722 aa20.83■□□□□ 0.92
KIRREL3-209ENST00000549874 APBA3O96018 575 aa20.82■□□□□ 0.92
KIRREL3-209ENST00000549874 TNS1Q9HBL0 1735 aaKnown RBP20.81■□□□□ 0.92
KIRREL3-209ENST00000549874 STK31Q9BXU1 1019 aa20.81■□□□□ 0.92
KIRREL3-209ENST00000549874 TJP1Q07157 1748 aa20.81■□□□□ 0.92
KIRREL3-209ENST00000549874 ZNF831Q5JPB2 1677 aa20.8■□□□□ 0.92
KIRREL3-209ENST00000549874 CACNA1FO60840 1977 aa20.8■□□□□ 0.92
KIRREL3-209ENST00000549874 STARD3NLO95772 234 aa20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 KCNQ4P56696 695 aa20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 ITPK1Q13572 414 aa20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 MRPL50Q8N5N7 158 aaKnown RBP20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 CHPF2Q9P2E5 772 aa20.79■□□□□ 0.92
KIRREL3-209ENST00000549874 CCNL1Q9UK58 526 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms