RNA–Protein interactions for RNA: ENST00000549842.1

CPNE8-206, Transcript of copine 8, humanhuman

TSL 2

Gene CPNE8, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-206ENST00000549842 SOBPA7XYQ1 873 aa7.42□□□□□ -1.22
CPNE8-206ENST00000549842 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
CPNE8-206ENST00000549842 GDF10P55107 478 aa7.42□□□□□ -1.22
CPNE8-206ENST00000549842 DEPDC4Q8N2C3 294 aa7.42□□□□□ -1.22
CPNE8-206ENST00000549842 LARGE2Q8N3Y3 721 aa7.42□□□□□ -1.22
CPNE8-206ENST00000549842 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
CPNE8-206ENST00000549842 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
CPNE8-206ENST00000549842 H3BM21 787 aa7.41□□□□□ -1.22
CPNE8-206ENST00000549842 PTSQ03393 145 aa7.41□□□□□ -1.22
CPNE8-206ENST00000549842 NFX1Q12986 1120 aaKnown RBP7.41□□□□□ -1.22
CPNE8-206ENST00000549842 KANK4Q5T7N3 995 aaPredicted RBP7.41□□□□□ -1.22
CPNE8-206ENST00000549842 TREML4Q6UXN2 200 aa7.41□□□□□ -1.22
CPNE8-206ENST00000549842 M0R2N6 131 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 BACH1O14867 736 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 MTFR1Q15390 333 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 SLC27A3Q5K4L6 730 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
CPNE8-206ENST00000549842 PPARGC1BQ86YN6 1023 aaKnown RBP7.4□□□□□ -1.22
CPNE8-206ENST00000549842 SLC16A10Q8TF71 515 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 PBXIP1Q96AQ6 731 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 ZSCAN10Q96SZ4 725 aaPredicted RBP7.4□□□□□ -1.22
CPNE8-206ENST00000549842 RAB6BQ9NRW1 208 aa7.4□□□□□ -1.22
CPNE8-206ENST00000549842 DNAAF2Q9NVR5 837 aaKnown RBP7.4□□□□□ -1.22
CPNE8-206ENST00000549842 PATL2C9JE40 543 aaKnown RBP7.39□□□□□ -1.23
CPNE8-206ENST00000549842 CDK2AP1O14519 115 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 PPFIA3O75145 1194 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 SMTNP53814 917 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 CLDN10P78369 228 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 CFAP70Q5T0N1 1121 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 SIX5Q8N196 739 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 OGFOD1Q8N543 542 aa7.39□□□□□ -1.23
CPNE8-206ENST00000549842 SENP3-EIF4A1A0A087X0R7 540 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 WFS1O76024 890 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 DKK1O94907 266 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 VSIG8P0DPA2 414 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 LMOD1P29536 600 aaPredicted RBP7.38□□□□□ -1.23
CPNE8-206ENST00000549842 NBPF10Q6P3W6 841 aaKnown RBP7.38□□□□□ -1.23
CPNE8-206ENST00000549842 PRICKLE2Q7Z3G6 844 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 NBPF15Q8N660 670 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 CCDC155Q8N6L0 562 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
CPNE8-206ENST00000549842 VRTNQ9H8Y1 702 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 DYRK1BQ9Y463 629 aa7.38□□□□□ -1.23
CPNE8-206ENST00000549842 A6NJY4 79 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 FAM196BA6NMK8 535 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 GTF2E1P29083 439 aaPredicted RBP7.37□□□□□ -1.23
CPNE8-206ENST00000549842 POU4F2Q12837 409 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 CCDC102BQ68D86 513 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 TAS1R3Q7RTX0 852 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 GMCL1Q96IK5 515 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 GZF1Q9H116 711 aaPredicted RBP7.37□□□□□ -1.23
CPNE8-206ENST00000549842 ZNF358Q9NW07 568 aa7.37□□□□□ -1.23
CPNE8-206ENST00000549842 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
CPNE8-206ENST00000549842 RASA1P20936 1047 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 SRPK2P78362 688 aaKnown RBP7.36□□□□□ -1.23
CPNE8-206ENST00000549842 PSME1Q06323 249 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 TLR1Q15399 786 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 GNASQ5JWF2 1037 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 TMCO4Q5TGY1 634 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 LARP1Q6PKG0 1096 aaKnown RBP7.36□□□□□ -1.23
CPNE8-206ENST00000549842 TPCN2Q8NHX9 752 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 RHBDD1Q8TEB9 315 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 IQSEC3Q9UPP2 1182 aaPredicted RBP7.36□□□□□ -1.23
CPNE8-206ENST00000549842 KIAA1024Q9UPX6 916 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
CPNE8-206ENST00000549842 CSB-PGBD3P0DP91 1061 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 RFX1P22670 979 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 EPHA4P54764 986 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 PTK7Q13308 1070 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 TMEM214Q6NUQ4 689 aaKnown RBP7.35□□□□□ -1.23
CPNE8-206ENST00000549842 ZNF295-AS1Q8N0V1 137 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.35□□□□□ -1.23
CPNE8-206ENST00000549842 IRF7Q92985 503 aa7.35□□□□□ -1.23
CPNE8-206ENST00000549842 SCHIP1Q9P0W5 487 aaPredicted RBP7.35□□□□□ -1.23
CPNE8-206ENST00000549842 BRD1O95696 1058 aa7.34□□□□□ -1.23
CPNE8-206ENST00000549842 RHOQP17081 205 aa7.34□□□□□ -1.23
CPNE8-206ENST00000549842 ITGA6P23229 1130 aa7.34□□□□□ -1.23
CPNE8-206ENST00000549842 FOXK2Q01167 660 aa7.34□□□□□ -1.23
CPNE8-206ENST00000549842 C4orf17Q53FE4 359 aa7.34□□□□□ -1.23
CPNE8-206ENST00000549842 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.23
CPNE8-206ENST00000549842 RBM19Q9Y4C8 960 aaKnown RBP7.34□□□□□ -1.23
CPNE8-206ENST00000549842 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.33□□□□□ -1.24
CPNE8-206ENST00000549842 A0A1B0GTH6 734 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 SEC13P55735 322 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 KCNA1Q09470 495 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 C1orf216Q8TAB5 229 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 TIMMDC1Q9NPL8 285 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 SERTAD1Q9UHV2 236 aa7.33□□□□□ -1.24
CPNE8-206ENST00000549842 WIPF1O43516 503 aa7.32□□□□□ -1.24
CPNE8-206ENST00000549842 F11P03951 625 aa7.32□□□□□ -1.24
CPNE8-206ENST00000549842 ELOAQ14241 798 aaKnown RBP7.32□□□□□ -1.24
CPNE8-206ENST00000549842 CRTC2Q53ET0 693 aaPredicted RBP7.32□□□□□ -1.24
CPNE8-206ENST00000549842 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
CPNE8-206ENST00000549842 ANKMY2Q8IV38 441 aa7.32□□□□□ -1.24
CPNE8-206ENST00000549842 GAS2L2Q8NHY3 880 aa7.32□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L15C9J2P7 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L10C9JJH3 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L13C9JLJ4 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L12C9JPN9 530 aa7.31□□□□□ -1.24
CPNE8-206ENST00000549842 USP17L11C9JVI0 530 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms