RNA–Protein interactions for RNA: ENST00000549461.1

PKP2-206, Transcript of plakophilin 2, humanhuman

TSL 2

Gene PKP2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-206ENST00000549461 SLC52A2Q9HAB3 445 aa12.18□□□□□ -0.46
PKP2-206ENST00000549461 DOT1LQ8TEK3 1739 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 BRWD3Q6RI45 1802 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 CENPBP07199 599 aaPredicted RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 HSP90AB1P08238 724 aaKnown RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 RBM6P78332 1123 aaKnown RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 CALD1Q05682 793 aaKnown RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 TEFQ10587 303 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 TAF7Q15545 349 aaPredicted RBP12.17□□□□□ -0.46
PKP2-206ENST00000549461 TSPYL6Q8N831 410 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 MYH16Q9H6N6 1097 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 TSPYL4Q9UJ04 414 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 KDM3BQ7LBC6 1761 aa12.17□□□□□ -0.46
PKP2-206ENST00000549461 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
PKP2-206ENST00000549461 PTF1AQ7RTS3 328 aa12.16□□□□□ -0.46
PKP2-206ENST00000549461 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
PKP2-206ENST00000549461 ACSBG1Q96GR2 724 aa12.16□□□□□ -0.46
PKP2-206ENST00000549461 RGS12O14924 1447 aa12.16□□□□□ -0.46
PKP2-206ENST00000549461 BTBD11A6QL63 1104 aa12.15□□□□□ -0.46
PKP2-206ENST00000549461 RXRBP28702 533 aa12.15□□□□□ -0.46
PKP2-206ENST00000549461 CABP4P57796 275 aa12.15□□□□□ -0.46
PKP2-206ENST00000549461 ITGB4P16144 1822 aa12.15□□□□□ -0.46
PKP2-206ENST00000549461 ERVV-2B6SEH9 535 aa12.14□□□□□ -0.47
PKP2-206ENST00000549461 ELL2O00472 640 aaPredicted RBP12.14□□□□□ -0.47
PKP2-206ENST00000549461 KCNQ2O43526 872 aa12.14□□□□□ -0.47
PKP2-206ENST00000549461 PRIM1P49642 420 aaKnown RBP12.14□□□□□ -0.47
PKP2-206ENST00000549461 PIGBQ92521 554 aa12.14□□□□□ -0.47
PKP2-206ENST00000549461 PAPPAQ13219 1627 aa12.14□□□□□ -0.47
PKP2-206ENST00000549461 SYTL4Q96C24 671 aaPredicted RBP12.13□□□□□ -0.47
PKP2-206ENST00000549461 BCL9O00512 1426 aa12.12□□□□□ -0.47
PKP2-206ENST00000549461 PRAMEF22A3QJZ6 481 aa12.12□□□□□ -0.47
PKP2-206ENST00000549461 EIF4A1P60842 406 aaKnown RBP12.12□□□□□ -0.47
PKP2-206ENST00000549461 TMOD3Q9NYL9 352 aa12.12□□□□□ -0.47
PKP2-206ENST00000549461 ASAP1Q9ULH1 1129 aa12.12□□□□□ -0.47
PKP2-206ENST00000549461 KCPQ6ZWJ8 1503 aa12.11□□□□□ -0.47
PKP2-206ENST00000549461 TCERG1O14776 1098 aaKnown RBP12.11□□□□□ -0.47
PKP2-206ENST00000549461 VAMP4O75379 141 aa12.11□□□□□ -0.47
PKP2-206ENST00000549461 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
PKP2-206ENST00000549461 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
PKP2-206ENST00000549461 BABAM1Q9NWV8 329 aa12.11□□□□□ -0.47
PKP2-206ENST00000549461 C5P01031 1676 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 BCAR3O75815 825 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 TWISTNBQ3B726 338 aaPredicted RBP12.1□□□□□ -0.47
PKP2-206ENST00000549461 ZNF496Q96IT1 587 aaPredicted RBP12.1□□□□□ -0.47
PKP2-206ENST00000549461 BCL2L13Q9BXK5 485 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 ATG3Q9NT62 314 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 RCAN3Q9UKA8 241 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 UBR2Q8IWV8 1755 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 NHSQ6T4R5 1651 aa12.1□□□□□ -0.47
PKP2-206ENST00000549461 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
PKP2-206ENST00000549461 PTCD1O75127 700 aaKnown RBP12.09□□□□□ -0.47
PKP2-206ENST00000549461 RARSP54136 660 aaKnown RBP12.09□□□□□ -0.47
PKP2-206ENST00000549461 NECTIN2Q92692 538 aa12.09□□□□□ -0.47
PKP2-206ENST00000549461 SUPT16HQ9Y5B9 1047 aaKnown RBP12.09□□□□□ -0.47
PKP2-206ENST00000549461 SBF2Q86WG5 1849 aa12.09□□□□□ -0.47
PKP2-206ENST00000549461 EP400Q96L91 3159 aa12.08□□□□□ -0.48
PKP2-206ENST00000549461 GIGYF1O75420 1035 aaPredicted RBP12.07□□□□□ -0.48
PKP2-206ENST00000549461 SSH1Q8WYL5 1049 aa12.07□□□□□ -0.48
PKP2-206ENST00000549461 SLC4A9Q96Q91 983 aa12.07□□□□□ -0.48
PKP2-206ENST00000549461 BTAF1O14981 1849 aa12.07□□□□□ -0.48
PKP2-206ENST00000549461 PLIN1O60240 522 aa12.06□□□□□ -0.48
PKP2-206ENST00000549461 TTC5Q8N0Z6 440 aa12.06□□□□□ -0.48
PKP2-206ENST00000549461 TRIM37O94972 964 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 EIF2S2P20042 333 aaKnown RBP12.05□□□□□ -0.48
PKP2-206ENST00000549461 FAM196AQ6ZSG2 479 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 FMNL2Q96PY5 1086 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 RBM42Q9BTD8 480 aaKnown RBP12.05□□□□□ -0.48
PKP2-206ENST00000549461 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 USP16Q9Y5T5 823 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
PKP2-206ENST00000549461 KAT6BQ8WYB5 2073 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 TJP1Q07157 1748 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 ANXA1P04083 346 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 CT47B1P0C2W7 299 aaPredicted RBP12.04□□□□□ -0.48
PKP2-206ENST00000549461 PIP4K2AP48426 406 aaPredicted RBP12.04□□□□□ -0.48
PKP2-206ENST00000549461 KCNQ4P56696 695 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 IRX6P78412 446 aaPredicted RBP12.04□□□□□ -0.48
PKP2-206ENST00000549461 PROSER3Q2NL68 480 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
PKP2-206ENST00000549461 SMC4Q9NTJ3 1288 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 RNF123Q5XPI4 1314 aa12.04□□□□□ -0.48
PKP2-206ENST00000549461 RRP1P56182 461 aaKnown RBP12.03□□□□□ -0.48
PKP2-206ENST00000549461 HDGFL1Q5TGJ6 251 aa12.03□□□□□ -0.48
PKP2-206ENST00000549461 DNAJC10Q8IXB1 793 aa12.03□□□□□ -0.48
PKP2-206ENST00000549461 LAMB4A4D0S4 1761 aa12.02□□□□□ -0.48
PKP2-206ENST00000549461 SNRPA1P09661 255 aaKnown RBP12.02□□□□□ -0.49
PKP2-206ENST00000549461 ITPK1Q13572 414 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 PDIA6Q15084 440 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 ALDH1L2Q3SY69 923 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 G2E3Q7L622 706 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 BCL11BQ9C0K0 894 aaPredicted RBP12.02□□□□□ -0.49
PKP2-206ENST00000549461 CHPF2Q9P2E5 772 aa12.02□□□□□ -0.49
PKP2-206ENST00000549461 LOC102724428A0A0B4J2F2 783 aa12.01□□□□□ -0.49
PKP2-206ENST00000549461 HOXB7P09629 217 aa12.01□□□□□ -0.49
PKP2-206ENST00000549461 SIK1P57059 783 aa12.01□□□□□ -0.49
PKP2-206ENST00000549461 FRAT1Q92837 279 aaPredicted RBP12.01□□□□□ -0.49
PKP2-206ENST00000549461 NOB1Q9ULX3 412 aaKnown RBP12.01□□□□□ -0.49
PKP2-206ENST00000549461 TNS1Q9HBL0 1735 aaKnown RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms