RNA–Protein interactions for RNA: ENST00000549209.5

SMARCC2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-206ENST00000549209 RSPH6AQ9H0K4 717 aa11.26□□□□□ -0.61
SMARCC2-206ENST00000549209 PTGER2P43116 358 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 POLA2Q14181 598 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 AKAP4Q5JQC9 854 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 SMARCC1Q92922 1105 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 SGIP1Q9BQI5 828 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 LGR6Q9HBX8 967 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 STK32BQ9NY57 414 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 TMOD3Q9NYL9 352 aa11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 CCNL1Q9UK58 526 aaPredicted RBP11.25□□□□□ -0.61
SMARCC2-206ENST00000549209 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
SMARCC2-206ENST00000549209 PNPLA7Q6ZV29 1317 aa11.24□□□□□ -0.61
SMARCC2-206ENST00000549209 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
SMARCC2-206ENST00000549209 LOC102724428A0A0B4J2F2 783 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 U2SURPO15042 1029 aaKnown RBP11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 SIK1P57059 783 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 ITPK1Q13572 414 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 RALBP1Q15311 655 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 NFATC2IPQ8NCF5 419 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 CFAP53Q96M91 514 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 MRC1P22897 1456 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 ITGB4P16144 1822 aa11.23□□□□□ -0.61
SMARCC2-206ENST00000549209 RNMTO43148 476 aaKnown RBP11.22□□□□□ -0.61
SMARCC2-206ENST00000549209 FCHSD2O94868 740 aa11.22□□□□□ -0.61
SMARCC2-206ENST00000549209 C1orf141Q5JVX7 400 aa11.22□□□□□ -0.61
SMARCC2-206ENST00000549209 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
SMARCC2-206ENST00000549209 ZBTB7AO95365 584 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 PRKAR2BP31323 418 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 DSG3P32926 999 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 CABP4P57796 275 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 IL17REQ8NFR9 667 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 PLEKHF1Q96S99 279 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 SLC52A2Q9HAB3 445 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 SPON1Q9HCB6 807 aa11.21□□□□□ -0.61
SMARCC2-206ENST00000549209 CEMIPQ8WUJ3 1361 aa11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 U2AF1L5P0DN76 240 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 U2AF1Q01081 240 aaKnown RBP eCLIP11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 COL23A1Q86Y22 540 aaPredicted RBP11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 MTFR1LQ9H019 292 aa11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 NUDCQ9Y266 331 aa11.2□□□□□ -0.62
SMARCC2-206ENST00000549209 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
SMARCC2-206ENST00000549209 PRKRIP1Q9H875 184 aaPredicted RBP11.19□□□□□ -0.62
SMARCC2-206ENST00000549209 TFCP2L1Q9NZI6 479 aa11.19□□□□□ -0.62
SMARCC2-206ENST00000549209 MAP3K5Q99683 1374 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 ZNF831Q5JPB2 1677 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 GNAT3A8MTJ3 354 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 SMIM5Q71RC9 77 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 GAS2L2Q8NHY3 880 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 KAT6BQ8WYB5 2073 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 QSER1Q2KHR3 1735 aa11.18□□□□□ -0.62
SMARCC2-206ENST00000549209 C5P01031 1676 aa11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 MYBBP1AQ9BQG0 1328 aaKnown RBP11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 ATP6V1AP38606 617 aa11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 KCPQ6ZWJ8 1503 aa11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 SCN11AQ9UI33 1791 aa11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 C4BP0C0L5 1744 aa11.17□□□□□ -0.62
SMARCC2-206ENST00000549209 TUBGCP6Q96RT7 1819 aa11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 COL24A1Q17RW2 1714 aa11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 HMGB2P26583 209 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 SLC39A6Q13433 755 aa11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 RC3H1Q5TC82 1133 aaKnown RBP11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 CICQ96RK0 1608 aaPredicted RBP11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 TAF1LQ8IZX4 1826 aa11.16□□□□□ -0.62
SMARCC2-206ENST00000549209 CNTNAP4Q9C0A0 1308 aa11.15□□□□□ -0.62
SMARCC2-206ENST00000549209 ZNF316A6NFI3 1004 aaPredicted RBP11.15□□□□□ -0.62
SMARCC2-206ENST00000549209 PTCD1O75127 700 aaKnown RBP11.15□□□□□ -0.62
SMARCC2-206ENST00000549209 SSFA2P28290 1259 aa11.15□□□□□ -0.62
SMARCC2-206ENST00000549209 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-206ENST00000549209 HTATSF1O43719 755 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-206ENST00000549209 INTS5Q6P9B9 1019 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-206ENST00000549209 FLAD1Q8NFF5 587 aa11.14□□□□□ -0.63
SMARCC2-206ENST00000549209 RBM42Q9BTD8 480 aaKnown RBP11.14□□□□□ -0.63
SMARCC2-206ENST00000549209 GNPATO15228 680 aa11.13□□□□□ -0.63
SMARCC2-206ENST00000549209 ZNF790Q6PG37 636 aa11.13□□□□□ -0.63
SMARCC2-206ENST00000549209 VSIG10Q8N0Z9 540 aa11.13□□□□□ -0.63
SMARCC2-206ENST00000549209 ZNF496Q96IT1 587 aaPredicted RBP11.13□□□□□ -0.63
SMARCC2-206ENST00000549209 AK7Q96M32 723 aa11.13□□□□□ -0.63
SMARCC2-206ENST00000549209 KCNQ3O43525 872 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 RPS6KA4O75676 772 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 CYP19A1P11511 503 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 DCTN1Q14203 1278 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 NFE2L2Q16236 605 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 MCM10Q7L590 875 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 DNAJC10Q8IXB1 793 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 ARXQ96QS3 562 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 UBR3Q6ZT12 1888 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 COL5A3P25940 1745 aaPredicted RBP11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 TJP1Q07157 1748 aa11.12□□□□□ -0.63
SMARCC2-206ENST00000549209 SIPA1L3O60292 1781 aaPredicted RBP11.11□□□□□ -0.63
SMARCC2-206ENST00000549209 ARHGEF1Q92888 912 aaKnown RBP11.11□□□□□ -0.63
SMARCC2-206ENST00000549209 SYT17Q9BSW7 474 aa11.11□□□□□ -0.63
SMARCC2-206ENST00000549209 FHDC1Q9C0D6 1143 aaPredicted RBP11.11□□□□□ -0.63
SMARCC2-206ENST00000549209 PHF14O94880 888 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 TEFQ10587 303 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 CCDC184Q52MB2 194 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 MSL1Q68DK7 614 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 ADAMTS8Q9UP79 889 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 UBR2Q8IWV8 1755 aa11.1□□□□□ -0.63
SMARCC2-206ENST00000549209 UTRNP46939 3433 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms