RNA–Protein interactions for RNA: ENST00000549173.5

CALCOCO1-212, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 4

Gene CALCOCO1, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-212ENST00000549173 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
CALCOCO1-212ENST00000549173 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
CALCOCO1-212ENST00000549173 KIAA1551Q9HCM1 1747 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 TOMM70O94826 608 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 MMP10P09238 476 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 PHKG2P15735 406 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 ADRA2BP18089 450 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 ATP6V1AP38606 617 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 ITPK1Q13572 414 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 CARD14Q9BXL6 1004 aa13.64□□□□□ -0.23
CALCOCO1-212ENST00000549173 KDRP35968 1356 aa13.63□□□□□ -0.23
CALCOCO1-212ENST00000549173 EYA1Q99502 592 aa13.63□□□□□ -0.23
CALCOCO1-212ENST00000549173 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
CALCOCO1-212ENST00000549173 ASAP1Q9ULH1 1129 aa13.63□□□□□ -0.23
CALCOCO1-212ENST00000549173 C10orf71Q711Q0 1435 aa13.63□□□□□ -0.23
CALCOCO1-212ENST00000549173 TRAPPC3LQ5T215 181 aa13.62□□□□□ -0.23
CALCOCO1-212ENST00000549173 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
CALCOCO1-212ENST00000549173 SMIM5Q71RC9 77 aa13.62□□□□□ -0.23
CALCOCO1-212ENST00000549173 RTCBQ9Y3I0 505 aaKnown RBP13.62□□□□□ -0.23
CALCOCO1-212ENST00000549173 ERVV-2B6SEH9 535 aa13.61□□□□□ -0.23
CALCOCO1-212ENST00000549173 CNTNAP4Q9C0A0 1308 aa13.61□□□□□ -0.23
CALCOCO1-212ENST00000549173 C4AP0C0L4 1744 aa13.6□□□□□ -0.23
CALCOCO1-212ENST00000549173 DNAJC5GQ8N7S2 189 aa13.6□□□□□ -0.23
CALCOCO1-212ENST00000549173 CCDC87Q9NVE4 849 aa13.6□□□□□ -0.23
CALCOCO1-212ENST00000549173 WWC3Q9ULE0 1092 aa13.6□□□□□ -0.23
CALCOCO1-212ENST00000549173 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 HSP90AB1P08238 724 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 BCS1LQ9Y276 419 aa13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 BRCA1P38398 1863 aaKnown RBP13.59□□□□□ -0.23
CALCOCO1-212ENST00000549173 N4BP2Q86UW6 1770 aaPredicted RBP13.58□□□□□ -0.23
CALCOCO1-212ENST00000549173 A0A0G2JLW4 131 aa13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 RPS6KA4O75676 772 aa13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 GYS1P13807 737 aa13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 ARHGEF1Q92888 912 aaKnown RBP13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 DCAF5Q96JK2 942 aa13.58□□□□□ -0.24
CALCOCO1-212ENST00000549173 DPEP1P16444 411 aa13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 ARHGAP27Q6ZUM4 889 aa13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 CCER1Q8TC90 406 aaPredicted RBP13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 SLC4A9Q96Q91 983 aa13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 PARP3Q9Y6F1 533 aa13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 ARFGEF1Q9Y6D6 1849 aa13.57□□□□□ -0.24
CALCOCO1-212ENST00000549173 FCHSD2O94868 740 aa13.56□□□□□ -0.24
CALCOCO1-212ENST00000549173 RFC4P35249 363 aa13.56□□□□□ -0.24
CALCOCO1-212ENST00000549173 FSTL1Q12841 308 aa13.56□□□□□ -0.24
CALCOCO1-212ENST00000549173 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
CALCOCO1-212ENST00000549173 KCNA3P22001 575 aa13.55□□□□□ -0.24
CALCOCO1-212ENST00000549173 NMRK2Q9NPI5 230 aa13.55□□□□□ -0.24
CALCOCO1-212ENST00000549173 PIM2Q9P1W9 311 aa13.55□□□□□ -0.24
CALCOCO1-212ENST00000549173 WDR90Q96KV7 1748 aa13.55□□□□□ -0.24
CALCOCO1-212ENST00000549173 AMOTQ4VCS5 1084 aa13.54□□□□□ -0.24
CALCOCO1-212ENST00000549173 PLEKHO1Q53GL0 409 aaPredicted RBP13.54□□□□□ -0.24
CALCOCO1-212ENST00000549173 RBM42Q9BTD8 480 aaKnown RBP13.54□□□□□ -0.24
CALCOCO1-212ENST00000549173 KDM2BQ8NHM5 1336 aa13.54□□□□□ -0.24
CALCOCO1-212ENST00000549173 C9orf131Q5VYM1 1079 aa13.53□□□□□ -0.24
CALCOCO1-212ENST00000549173 JMYQ8N9B5 988 aa13.53□□□□□ -0.24
CALCOCO1-212ENST00000549173 KDM6AO15550 1401 aaPredicted RBP13.53□□□□□ -0.24
CALCOCO1-212ENST00000549173 CABP4P57796 275 aa13.52□□□□□ -0.25
CALCOCO1-212ENST00000549173 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-212ENST00000549173 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.25
CALCOCO1-212ENST00000549173 KLRG1Q96E93 195 aa13.52□□□□□ -0.25
CALCOCO1-212ENST00000549173 ZC3H4Q9UPT8 1303 aaKnown RBP13.52□□□□□ -0.25
CALCOCO1-212ENST00000549173 MYH14Q7Z406 1995 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-212ENST00000549173 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
CALCOCO1-212ENST00000549173 TNRC6CQ9HCJ0 1690 aaKnown RBP13.5□□□□□ -0.25
CALCOCO1-212ENST00000549173 EIF4G2P78344 907 aaKnown RBP eCLIP13.5□□□□□ -0.25
CALCOCO1-212ENST00000549173 ZNF530Q6P9A1 599 aaPredicted RBP13.5□□□□□ -0.25
CALCOCO1-212ENST00000549173 CRKLP46109 303 aaKnown RBP13.49□□□□□ -0.25
CALCOCO1-212ENST00000549173 MTHFSP49914 203 aa13.49□□□□□ -0.25
CALCOCO1-212ENST00000549173 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
CALCOCO1-212ENST00000549173 TJP1Q07157 1748 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 TM4SF1P30408 202 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 DDR1Q08345 913 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 FKBP8Q14318 412 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 RNF181Q9P0P0 153 aa13.48□□□□□ -0.25
CALCOCO1-212ENST00000549173 ADAMTS7Q9UKP4 1686 aa13.47□□□□□ -0.25
CALCOCO1-212ENST00000549173 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
CALCOCO1-212ENST00000549173 NFATC2IPQ8NCF5 419 aa13.47□□□□□ -0.25
CALCOCO1-212ENST00000549173 SMC1BQ8NDV3 1235 aa13.47□□□□□ -0.25
CALCOCO1-212ENST00000549173 SBF1O95248 1867 aa13.46□□□□□ -0.25
CALCOCO1-212ENST00000549173 POLRMTO00411 1230 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-212ENST00000549173 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
CALCOCO1-212ENST00000549173 INTS5Q6P9B9 1019 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-212ENST00000549173 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
CALCOCO1-212ENST00000549173 RRAGCQ9HB90 399 aa13.45□□□□□ -0.26
CALCOCO1-212ENST00000549173 NRXN2Q9P2S2 1712 aa13.44□□□□□ -0.26
CALCOCO1-212ENST00000549173 ZPR1O75312 459 aa13.44□□□□□ -0.26
CALCOCO1-212ENST00000549173 CHRNA5P30532 468 aa13.44□□□□□ -0.26
CALCOCO1-212ENST00000549173 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
CALCOCO1-212ENST00000549173 SOS1Q07889 1333 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-212ENST00000549173 LMNB1P20700 586 aa13.43□□□□□ -0.26
CALCOCO1-212ENST00000549173 COL13A1Q5TAT6 717 aaPredicted RBP13.43□□□□□ -0.26
CALCOCO1-212ENST00000549173 NARFQ9UHQ1 456 aa13.43□□□□□ -0.26
CALCOCO1-212ENST00000549173 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
CALCOCO1-212ENST00000549173 MRC1P22897 1456 aa13.42□□□□□ -0.26
CALCOCO1-212ENST00000549173 GLTPD2A6NH11 291 aa13.42□□□□□ -0.26
CALCOCO1-212ENST00000549173 VEGFAP15692 232 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms