RNA–Protein interactions for RNA: ENST00000549047.5

ARFGAP1-221, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 1,040 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-221ENST00000549047 MAP3K5Q99683 1374 aa20.51■□□□□ 0.87
ARFGAP1-221ENST00000549047 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
ARFGAP1-221ENST00000549047 C4BP0C0L5 1744 aa20.5■□□□□ 0.87
ARFGAP1-221ENST00000549047 AMIGO3Q86WK7 504 aa20.5■□□□□ 0.87
ARFGAP1-221ENST00000549047 COL3A1P02461 1466 aaPredicted RBP20.5■□□□□ 0.87
ARFGAP1-221ENST00000549047 AKAP4Q5JQC9 854 aa20.49■□□□□ 0.87
ARFGAP1-221ENST00000549047 MSL1Q68DK7 614 aa20.49■□□□□ 0.87
ARFGAP1-221ENST00000549047 PHF14O94880 888 aa20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 SMIM5Q71RC9 77 aa20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 KLHL34Q8N239 644 aa20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 UTRNP46939 3433 aa20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 TAF1LQ8IZX4 1826 aa20.48■□□□□ 0.87
ARFGAP1-221ENST00000549047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.47■□□□□ 0.87
ARFGAP1-221ENST00000549047 U2SURPO15042 1029 aaKnown RBP20.47■□□□□ 0.87
ARFGAP1-221ENST00000549047 NFATC2IPQ8NCF5 419 aa20.47■□□□□ 0.87
ARFGAP1-221ENST00000549047 SLC4A9Q96Q91 983 aa20.47■□□□□ 0.87
ARFGAP1-221ENST00000549047 GNPATO15228 680 aa20.46■□□□□ 0.87
ARFGAP1-221ENST00000549047 SSFA2P28290 1259 aa20.46■□□□□ 0.87
ARFGAP1-221ENST00000549047 COL24A1Q17RW2 1714 aa20.46■□□□□ 0.87
ARFGAP1-221ENST00000549047 MTHFSDQ2M296 383 aaKnown RBP20.45■□□□□ 0.86
ARFGAP1-221ENST00000549047 CFAP53Q96M91 514 aa20.44■□□□□ 0.86
ARFGAP1-221ENST00000549047 LGR6Q9HBX8 967 aa20.44■□□□□ 0.86
ARFGAP1-221ENST00000549047 PTCD1O75127 700 aaKnown RBP20.43■□□□□ 0.86
ARFGAP1-221ENST00000549047 PPP2R1AP30153 589 aa20.42■□□□□ 0.86
ARFGAP1-221ENST00000549047 SLC52A2Q9HAB3 445 aa20.42■□□□□ 0.86
ARFGAP1-221ENST00000549047 RNMTO43148 476 aaKnown RBP20.41■□□□□ 0.86
ARFGAP1-221ENST00000549047 YY1P25490 414 aa20.41■□□□□ 0.86
ARFGAP1-221ENST00000549047 UBR3Q6ZT12 1888 aa20.41■□□□□ 0.86
ARFGAP1-221ENST00000549047 GOLGB1Q14789 3259 aaKnown RBP20.4■□□□□ 0.86
ARFGAP1-221ENST00000549047 RC3H1Q5TC82 1133 aaKnown RBP20.4■□□□□ 0.86
ARFGAP1-221ENST00000549047 NLGN2Q8NFZ4 835 aa20.4■□□□□ 0.86
ARFGAP1-221ENST00000549047 CNTNAP4Q9C0A0 1308 aa20.4■□□□□ 0.86
ARFGAP1-221ENST00000549047 RTCBQ9Y3I0 505 aaKnown RBP20.4■□□□□ 0.86
ARFGAP1-221ENST00000549047 ZNF831Q5JPB2 1677 aa20.38■□□□□ 0.85
ARFGAP1-221ENST00000549047 MRC1P22897 1456 aa20.38■□□□□ 0.85
ARFGAP1-221ENST00000549047 SCN11AQ9UI33 1791 aa20.37■□□□□ 0.85
ARFGAP1-221ENST00000549047 TRAPPC3LQ5T215 181 aa20.37■□□□□ 0.85
ARFGAP1-221ENST00000549047 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
ARFGAP1-221ENST00000549047 NUDCQ9Y266 331 aa20.37■□□□□ 0.85
ARFGAP1-221ENST00000549047 RPS6KA4O75676 772 aa20.36■□□□□ 0.85
ARFGAP1-221ENST00000549047 ADRA2BP18089 450 aa20.36■□□□□ 0.85
ARFGAP1-221ENST00000549047 GPR162Q16538 588 aa20.36■□□□□ 0.85
ARFGAP1-221ENST00000549047 PRKAR2BP31323 418 aa20.35■□□□□ 0.85
ARFGAP1-221ENST00000549047 CRKLP46109 303 aaKnown RBP20.35■□□□□ 0.85
ARFGAP1-221ENST00000549047 SLC39A6Q13433 755 aa20.35■□□□□ 0.85
ARFGAP1-221ENST00000549047 RSPH6AQ9H0K4 717 aa20.35■□□□□ 0.85
ARFGAP1-221ENST00000549047 CD2APQ9Y5K6 639 aa20.35■□□□□ 0.85
ARFGAP1-221ENST00000549047 GNAT3A8MTJ3 354 aa20.34■□□□□ 0.85
ARFGAP1-221ENST00000549047 U2AF1L5P0DN76 240 aaPredicted RBP20.34■□□□□ 0.85
ARFGAP1-221ENST00000549047 U2AF1Q01081 240 aaKnown RBP eCLIP20.34■□□□□ 0.858e-11■■□□□ 11.7
ARFGAP1-221ENST00000549047 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
ARFGAP1-221ENST00000549047 ARHGEF1Q92888 912 aaKnown RBP20.34■□□□□ 0.85
ARFGAP1-221ENST00000549047 COL5A3P25940 1745 aaPredicted RBP20.33■□□□□ 0.85
ARFGAP1-221ENST00000549047 ADAMTS7Q9UKP4 1686 aa20.33■□□□□ 0.85
ARFGAP1-221ENST00000549047 PHACTR3Q96KR7 559 aa20.33■□□□□ 0.85
ARFGAP1-221ENST00000549047 RFC4P35249 363 aa20.32■□□□□ 0.84
ARFGAP1-221ENST00000549047 DNAJC10Q8IXB1 793 aa20.32■□□□□ 0.84
ARFGAP1-221ENST00000549047 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
ARFGAP1-221ENST00000549047 MMP10P09238 476 aa20.31■□□□□ 0.84
ARFGAP1-221ENST00000549047 TEFQ10587 303 aa20.3■□□□□ 0.84
ARFGAP1-221ENST00000549047 INTS5Q6P9B9 1019 aaKnown RBP20.3■□□□□ 0.84
ARFGAP1-221ENST00000549047 NLGN1Q8N2Q7 840 aa20.3■□□□□ 0.84
ARFGAP1-221ENST00000549047 KCPQ6ZWJ8 1503 aa20.3■□□□□ 0.84
ARFGAP1-221ENST00000549047 TJP1Q07157 1748 aa20.3■□□□□ 0.84
ARFGAP1-221ENST00000549047 CICQ96RK0 1608 aaPredicted RBP20.29■□□□□ 0.84
ARFGAP1-221ENST00000549047 FCHSD2O94868 740 aa20.29■□□□□ 0.84
ARFGAP1-221ENST00000549047 GYS1P13807 737 aa20.29■□□□□ 0.84
ARFGAP1-221ENST00000549047 CCDC87Q9NVE4 849 aa20.29■□□□□ 0.84
ARFGAP1-221ENST00000549047 CYP19A1P11511 503 aaPredicted RBP20.28■□□□□ 0.84
ARFGAP1-221ENST00000549047 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
ARFGAP1-221ENST00000549047 TTC5Q8N0Z6 440 aa20.28■□□□□ 0.84
ARFGAP1-221ENST00000549047 CEMIPQ8WUJ3 1361 aa20.27■□□□□ 0.84
ARFGAP1-221ENST00000549047 VSIG10Q8N0Z9 540 aa20.27■□□□□ 0.84
ARFGAP1-221ENST00000549047 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
ARFGAP1-221ENST00000549047 SRP68Q9UHB9 627 aaKnown RBP20.26■□□□□ 0.83
ARFGAP1-221ENST00000549047 ZNF790Q6PG37 636 aa20.25■□□□□ 0.83
ARFGAP1-221ENST00000549047 SOS1Q07889 1333 aaPredicted RBP20.25■□□□□ 0.83
ARFGAP1-221ENST00000549047 USP42Q9H9J4 1324 aaKnown RBP20.25■□□□□ 0.83
ARFGAP1-221ENST00000549047 GRIN3BO60391 1043 aa20.24■□□□□ 0.83
ARFGAP1-221ENST00000549047 ZNF496Q96IT1 587 aaPredicted RBP20.24■□□□□ 0.83
ARFGAP1-221ENST00000549047 ZBTB1Q9Y2K1 713 aa20.24■□□□□ 0.83
ARFGAP1-221ENST00000549047 DDX10Q13206 875 aaKnown RBP20.23■□□□□ 0.83
ARFGAP1-221ENST00000549047 RTF1Q92541 710 aaKnown RBP20.23■□□□□ 0.83
ARFGAP1-221ENST00000549047 FKBP8Q14318 412 aa20.22■□□□□ 0.83
ARFGAP1-221ENST00000549047 PARP3Q9Y6F1 533 aa20.22■□□□□ 0.83
ARFGAP1-221ENST00000549047 C4AP0C0L4 1744 aa20.22■□□□□ 0.83
ARFGAP1-221ENST00000549047 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 BTBD11A6QL63 1104 aa20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 STARD3NLO95772 234 aa20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 MCM10Q7L590 875 aa20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 ZNF784Q8NCA9 323 aaPredicted RBP20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 HEG1Q9ULI3 1381 aa20.21■□□□□ 0.83
ARFGAP1-221ENST00000549047 C10orf71Q711Q0 1435 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 ZPR1O75312 459 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 RALBP1Q15311 655 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 FMNL2Q96PY5 1086 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 WWC3Q9ULE0 1092 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 UBR2Q8IWV8 1755 aa20.2■□□□□ 0.82
ARFGAP1-221ENST00000549047 COL15A1P39059 1388 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms