RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 GNPATO15228 680 aa11.93□□□□□ -0.5
TROAP-208ENST00000548817 HOXC9P31274 260 aa11.93□□□□□ -0.5
TROAP-208ENST00000548817 PIM2Q9P1W9 311 aa11.93□□□□□ -0.5
TROAP-208ENST00000548817 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
TROAP-208ENST00000548817 LOC102724428A0A0B4J2F2 783 aa11.92□□□□□ -0.5
TROAP-208ENST00000548817 SIK1P57059 783 aa11.92□□□□□ -0.5
TROAP-208ENST00000548817 DALRD3Q5D0E6 543 aaKnown RBP11.92□□□□□ -0.5
TROAP-208ENST00000548817 KDM6AO15550 1401 aaPredicted RBP11.92□□□□□ -0.5
TROAP-208ENST00000548817 SMG6Q86US8 1419 aaKnown RBP11.92□□□□□ -0.5
TROAP-208ENST00000548817 MAP3K19Q56UN5 1328 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 SLC24A1O60721 1099 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
TROAP-208ENST00000548817 ADRA2BP18089 450 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 AMPHP49418 695 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 CTCFP49711 727 aaPredicted RBP11.91□□□□□ -0.5
TROAP-208ENST00000548817 TMF1P82094 1093 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 LINC00116Q8NCU8 138 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 SLC12A5Q9H2X9 1139 aa11.91□□□□□ -0.5
TROAP-208ENST00000548817 GLTPD2A6NH11 291 aa11.9□□□□□ -0.5
TROAP-208ENST00000548817 KCNA3P22001 575 aa11.9□□□□□ -0.5
TROAP-208ENST00000548817 SMIM5Q71RC9 77 aa11.9□□□□□ -0.5
TROAP-208ENST00000548817 CREBZFQ9NS37 354 aa11.9□□□□□ -0.5
TROAP-208ENST00000548817 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
TROAP-208ENST00000548817 FOXN1O15353 648 aa11.89□□□□□ -0.51
TROAP-208ENST00000548817 NBPF6Q5VWK0 638 aa11.89□□□□□ -0.51
TROAP-208ENST00000548817 AIDAQ96BJ3 306 aa11.89□□□□□ -0.51
TROAP-208ENST00000548817 NBPF4Q96M43 638 aa11.89□□□□□ -0.51
TROAP-208ENST00000548817 PUS7Q96PZ0 661 aaKnown RBP11.89□□□□□ -0.51
TROAP-208ENST00000548817 ZNF831Q5JPB2 1677 aa11.89□□□□□ -0.51
TROAP-208ENST00000548817 CYP27B1O15528 508 aa11.88□□□□□ -0.51
TROAP-208ENST00000548817 NKX1-1Q15270 411 aaPredicted RBP11.88□□□□□ -0.51
TROAP-208ENST00000548817 TRAPPC3LQ5T215 181 aa11.88□□□□□ -0.51
TROAP-208ENST00000548817 PIGBQ92521 554 aa11.88□□□□□ -0.51
TROAP-208ENST00000548817 COG3Q96JB2 828 aa11.88□□□□□ -0.51
TROAP-208ENST00000548817 RTCBQ9Y3I0 505 aaKnown RBP11.88□□□□□ -0.51
TROAP-208ENST00000548817 RGS19P49795 217 aa11.87□□□□□ -0.51
TROAP-208ENST00000548817 MLLT1Q03111 559 aaPredicted RBP11.87□□□□□ -0.51
TROAP-208ENST00000548817 ABHD8Q96I13 439 aa11.87□□□□□ -0.51
TROAP-208ENST00000548817 A0A1W2PP64 1363 aa11.87□□□□□ -0.51
TROAP-208ENST00000548817 GYS1P13807 737 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 LMNB1P20700 586 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 ATP6V1AP38606 617 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 ITPK1Q13572 414 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 CNTNAP1P78357 1384 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 TIAM2Q8IVF5 1701 aa11.86□□□□□ -0.51
TROAP-208ENST00000548817 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
TROAP-208ENST00000548817 RC3H1Q5TC82 1133 aaKnown RBP11.85□□□□□ -0.51
TROAP-208ENST00000548817 MKRN1Q9UHC7 482 aaKnown RBP11.85□□□□□ -0.51
TROAP-208ENST00000548817 KDRP35968 1356 aa11.84□□□□□ -0.51
TROAP-208ENST00000548817 RFC4P35249 363 aa11.84□□□□□ -0.51
TROAP-208ENST00000548817 USHBP1Q8N6Y0 703 aa11.84□□□□□ -0.51
TROAP-208ENST00000548817 TMOD3Q9NYL9 352 aa11.84□□□□□ -0.51
TROAP-208ENST00000548817 COL5A3P25940 1745 aaPredicted RBP11.83□□□□□ -0.52
TROAP-208ENST00000548817 INSRP06213 1382 aa11.83□□□□□ -0.52
TROAP-208ENST00000548817 ST20-MTHFSA0A0A6YYL1 179 aa11.83□□□□□ -0.52
TROAP-208ENST00000548817 CHADLQ6NUI6 762 aa11.83□□□□□ -0.52
TROAP-208ENST00000548817 ARHGEF1Q92888 912 aaKnown RBP11.83□□□□□ -0.52
TROAP-208ENST00000548817 CNTNAP4Q9C0A0 1308 aa11.83□□□□□ -0.52
TROAP-208ENST00000548817 RPS6KA4O75676 772 aa11.82□□□□□ -0.52
TROAP-208ENST00000548817 DPY19L2Q6NUT2 758 aa11.82□□□□□ -0.52
TROAP-208ENST00000548817 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
TROAP-208ENST00000548817 SPG7Q9UQ90 795 aa11.82□□□□□ -0.52
TROAP-208ENST00000548817 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
TROAP-208ENST00000548817 NCAPD2Q15021 1401 aa11.81□□□□□ -0.52
TROAP-208ENST00000548817 LBX1P52954 281 aa11.81□□□□□ -0.52
TROAP-208ENST00000548817 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.81□□□□□ -0.52
TROAP-208ENST00000548817 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
TROAP-208ENST00000548817 FLT4P35916 1363 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 POTECB2RU33 542 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 RASSF7Q02833 373 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 CDCA8Q53HL2 280 aa11.8□□□□□ -0.52
TROAP-208ENST00000548817 CHRNA5P30532 468 aa11.79□□□□□ -0.52
TROAP-208ENST00000548817 TESK2Q96S53 571 aa11.79□□□□□ -0.52
TROAP-208ENST00000548817 ATG3Q9NT62 314 aa11.79□□□□□ -0.52
TROAP-208ENST00000548817 CCDC88AQ3V6T2 1871 aa11.78□□□□□ -0.52
TROAP-208ENST00000548817 HSPA8P11142 646 aaKnown RBP11.78□□□□□ -0.52
TROAP-208ENST00000548817 VEGFBP49765 207 aa11.78□□□□□ -0.52
TROAP-208ENST00000548817 DDR1Q08345 913 aa11.78□□□□□ -0.52
TROAP-208ENST00000548817 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
TROAP-208ENST00000548817 PASKQ96RG2 1323 aa11.78□□□□□ -0.52
TROAP-208ENST00000548817 DICER1Q9UPY3 1922 aaKnown RBP11.78□□□□□ -0.52
TROAP-208ENST00000548817 FBLN1P23142 703 aa11.77□□□□□ -0.53
TROAP-208ENST00000548817 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
TROAP-208ENST00000548817 GGNBP2Q9H3C7 697 aa11.77□□□□□ -0.53
TROAP-208ENST00000548817 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.53
TROAP-208ENST00000548817 MYH14Q7Z406 1995 aaKnown RBP11.76□□□□□ -0.53
TROAP-208ENST00000548817 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
TROAP-208ENST00000548817 TMEM88BA6NKF7 163 aa11.76□□□□□ -0.53
TROAP-208ENST00000548817 HSP90AB2PQ58FF8 381 aa11.76□□□□□ -0.53
TROAP-208ENST00000548817 IFNL2Q8IZJ0 200 aa11.76□□□□□ -0.53
TROAP-208ENST00000548817 NFKBIEO00221 500 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 POLRMTO00411 1230 aaKnown RBP11.75□□□□□ -0.53
TROAP-208ENST00000548817 FYB1O15117 783 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 PHKG2P15735 406 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 FKBP8Q14318 412 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 LDHDQ86WU2 507 aa11.75□□□□□ -0.53
TROAP-208ENST00000548817 TTLL6Q8N841 843 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms