RNA–Protein interactions for RNA: ENST00000548620.1

USP15-209, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 3

Gene USP15, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-209ENST00000548620 SIX5Q8N196 739 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 CCDC82Q8N4S0 544 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.64□□□□□ -0.71
USP15-209ENST00000548620 SLC4A9Q96Q91 983 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 ZNF358Q9NW07 568 aa10.64□□□□□ -0.71
USP15-209ENST00000548620 SPATA31C2B4DYI2 1134 aa10.63□□□□□ -0.71
USP15-209ENST00000548620 CRTC2Q53ET0 693 aaPredicted RBP10.63□□□□□ -0.71
USP15-209ENST00000548620 ZNF594Q96JF6 807 aaPredicted RBP10.63□□□□□ -0.71
USP15-209ENST00000548620 ZSCAN10Q96SZ4 725 aaPredicted RBP10.63□□□□□ -0.71
USP15-209ENST00000548620 NXF1Q9UBU9 619 aaKnown RBP10.63□□□□□ -0.71
USP15-209ENST00000548620 SERTAD1Q9UHV2 236 aa10.63□□□□□ -0.71
USP15-209ENST00000548620 SENP3-EIF4A1A0A087X0R7 540 aa10.62□□□□□ -0.71
USP15-209ENST00000548620 RHOQP17081 205 aa10.62□□□□□ -0.71
USP15-209ENST00000548620 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
USP15-209ENST00000548620 FAM196BA6NMK8 535 aa10.61□□□□□ -0.71
USP15-209ENST00000548620 SMTNP53814 917 aa10.61□□□□□ -0.71
USP15-209ENST00000548620 SRPK2P78362 688 aaKnown RBP10.61□□□□□ -0.71
USP15-209ENST00000548620 POU4F2Q12837 409 aa10.61□□□□□ -0.71
USP15-209ENST00000548620 PTK7Q13308 1070 aa10.61□□□□□ -0.71
USP15-209ENST00000548620 USP17L15C9J2P7 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L10C9JJH3 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L13C9JLJ4 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L12C9JPN9 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L11C9JVI0 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L21D6R901 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L18D6R9N7 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L22D6RA61 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L17D6RBQ6 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L19D6RCP7 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L20D6RJB6 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 TERTO14746 1132 aaKnown RBP10.6□□□□□ -0.71
USP15-209ENST00000548620 USP17L24Q0WX57 530 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 MTFR1Q15390 333 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 NBPF10Q6P3W6 841 aaKnown RBP10.6□□□□□ -0.71
USP15-209ENST00000548620 LARP1Q6PKG0 1096 aaKnown RBP10.6□□□□□ -0.71
USP15-209ENST00000548620 PPARGC1BQ86YN6 1023 aaKnown RBP10.6□□□□□ -0.71
USP15-209ENST00000548620 NBPF15Q8N660 670 aa10.6□□□□□ -0.71
USP15-209ENST00000548620 A6NJY4 79 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
USP15-209ENST00000548620 BACH1O14867 736 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 CDCA8Q53HL2 280 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 NPAS3Q8IXF0 933 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 CCDC155Q8N6L0 562 aa10.59□□□□□ -0.71
USP15-209ENST00000548620 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.58□□□□□ -0.72
USP15-209ENST00000548620 PPFIA3O75145 1194 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 VEGFBP49765 207 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 EPHA4P54764 986 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
USP15-209ENST00000548620 WDR44Q5JSH3 913 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 TMEM214Q6NUQ4 689 aaKnown RBP10.58□□□□□ -0.72
USP15-209ENST00000548620 RHBDD1Q8TEB9 315 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 IQSEC3Q9UPP2 1182 aaPredicted RBP10.58□□□□□ -0.72
USP15-209ENST00000548620 USP3Q9Y6I4 520 aa10.58□□□□□ -0.72
USP15-209ENST00000548620 SFI1A8K8P3 1242 aa10.57□□□□□ -0.72
USP15-209ENST00000548620 H3BM21 787 aa10.57□□□□□ -0.72
USP15-209ENST00000548620 M0R2N6 131 aa10.57□□□□□ -0.72
USP15-209ENST00000548620 C4orf17Q53FE4 359 aa10.57□□□□□ -0.72
USP15-209ENST00000548620 GNASQ5JWF2 1037 aa10.57□□□□□ -0.72
USP15-209ENST00000548620 CDK2AP1O14519 115 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 GTF2E1P29083 439 aaPredicted RBP10.56□□□□□ -0.72
USP15-209ENST00000548620 DPYDQ12882 1025 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 ANKMY2Q8IV38 441 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 TNS4Q8IZW8 715 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 ZNF295-AS1Q8N0V1 137 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 ARXQ96QS3 562 aa10.56□□□□□ -0.72
USP15-209ENST00000548620 SCHIP1Q9P0W5 487 aaPredicted RBP10.56□□□□□ -0.72
USP15-209ENST00000548620 SEC13P55735 322 aa10.55□□□□□ -0.72
USP15-209ENST00000548620 FOXK2Q01167 660 aa10.55□□□□□ -0.72
USP15-209ENST00000548620 RBM19Q9Y4C8 960 aaKnown RBP10.55□□□□□ -0.72
USP15-209ENST00000548620 PHKA2P46019 1235 aa10.54□□□□□ -0.72
USP15-209ENST00000548620 TSEN2Q8NCE0 465 aaKnown RBP10.54□□□□□ -0.72
USP15-209ENST00000548620 PBXIP1Q96AQ6 731 aa10.54□□□□□ -0.72
USP15-209ENST00000548620 DYRK1BQ9Y463 629 aa10.54□□□□□ -0.72
USP15-209ENST00000548620 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
USP15-209ENST00000548620 LCE2CQ5TA81 110 aa10.53□□□□□ -0.72
USP15-209ENST00000548620 TREML4Q6UXN2 200 aa10.53□□□□□ -0.72
USP15-209ENST00000548620 TIMMDC1Q9NPL8 285 aa10.53□□□□□ -0.72
USP15-209ENST00000548620 WFS1O76024 890 aa10.52□□□□□ -0.73
USP15-209ENST00000548620 ITGA6P23229 1130 aa10.52□□□□□ -0.73
USP15-209ENST00000548620 SLC9A9Q8IVB4 645 aa10.52□□□□□ -0.73
USP15-209ENST00000548620 NIFKQ9BYG3 293 aaKnown RBP10.52□□□□□ -0.73
USP15-209ENST00000548620 ATG7O95352 703 aa10.51□□□□□ -0.73
USP15-209ENST00000548620 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
USP15-209ENST00000548620 ELOAQ14241 798 aaKnown RBP10.51□□□□□ -0.73
USP15-209ENST00000548620 SLC16A10Q8TF71 515 aa10.51□□□□□ -0.73
USP15-209ENST00000548620 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
USP15-209ENST00000548620 NOVA2Q9UNW9 492 aaKnown RBP10.51□□□□□ -0.73
USP15-209ENST00000548620 TBCELQ5QJ74 424 aa10.5□□□□□ -0.73
USP15-209ENST00000548620 TSPAN10Q9H1Z9 355 aaPredicted RBP10.5□□□□□ -0.73
USP15-209ENST00000548620 CUEDC1Q9NWM3 386 aaPredicted RBP10.5□□□□□ -0.73
USP15-209ENST00000548620 ERBB4Q15303 1308 aa10.5□□□□□ -0.73
USP15-209ENST00000548620 A0A1B0GTH6 734 aa10.49□□□□□ -0.73
USP15-209ENST00000548620 VSIG8P0DPA2 414 aa10.49□□□□□ -0.73
USP15-209ENST00000548620 FAM200AQ8TCP9 573 aa10.49□□□□□ -0.73
USP15-209ENST00000548620 GAS2L1Q99501 681 aaPredicted RBP10.49□□□□□ -0.73
USP15-209ENST00000548620 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
USP15-209ENST00000548620 ZDHHC1Q8WTX9 485 aa10.48□□□□□ -0.73
USP15-209ENST00000548620 NANOS1Q8WY41 292 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms