RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PRIMPOLQ96LW4 560 aa7.35□□□□□ -1.23
PTCH1-216ENST00000548379 TNFRSF10AO00220 468 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 RGS20O76081 388 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 IL2RAP01589 272 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 IGFBP4P22692 258 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 CBLBQ13191 982 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 ESCO1Q5FWF5 840 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 CCER1Q8TC90 406 aaPredicted RBP7.34□□□□□ -1.23
PTCH1-216ENST00000548379 HINFPQ9BQA5 517 aa7.34□□□□□ -1.23
PTCH1-216ENST00000548379 TTC24A2A3L6 582 aaPredicted RBP7.33□□□□□ -1.24
PTCH1-216ENST00000548379 C21orf2O43822 256 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 ZIC2O95409 532 aaPredicted RBP7.33□□□□□ -1.24
PTCH1-216ENST00000548379 SCNN1AP37088 669 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 TNS4Q8IZW8 715 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 GAS2L2Q8NHY3 880 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 ZFAND3Q9H8U3 227 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 ARHGEF10LQ9HCE6 1279 aa7.33□□□□□ -1.24
PTCH1-216ENST00000548379 SCHIP1Q9P0W5 487 aaPredicted RBP7.33□□□□□ -1.24
PTCH1-216ENST00000548379 LGR5O75473 907 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 PTGIRP43119 386 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 SMTNP53814 917 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 WDR4P57081 412 aaKnown RBP7.32□□□□□ -1.24
PTCH1-216ENST00000548379 CLN3Q13286 438 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 FKBP5Q13451 457 aaPredicted RBP7.32□□□□□ -1.24
PTCH1-216ENST00000548379 POTEAQ6S8J7 498 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 SND1Q7KZF4 910 aaKnown RBP eCLIP7.32□□□□□ -1.24
PTCH1-216ENST00000548379 ZNF295-AS1Q8N0V1 137 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 COL26A1Q96A83 441 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 ESYT1Q9BSJ8 1104 aa7.32□□□□□ -1.24
PTCH1-216ENST00000548379 IQSEC3Q9UPP2 1182 aaPredicted RBP7.32□□□□□ -1.24
PTCH1-216ENST00000548379 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
PTCH1-216ENST00000548379 A0A1W2PRU2 124 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 A6NJY4 79 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 FOXO3O43524 673 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 TMCO4Q5TGY1 634 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 MEIOBQ8N635 442 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 HPS1Q92902 700 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 PURBQ96QR8 312 aaKnown RBP7.31□□□□□ -1.24
PTCH1-216ENST00000548379 FHDC1Q9C0D6 1143 aaPredicted RBP7.31□□□□□ -1.24
PTCH1-216ENST00000548379 TSPAN10Q9H1Z9 355 aaPredicted RBP7.31□□□□□ -1.24
PTCH1-216ENST00000548379 RAB6BQ9NRW1 208 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 SERTAD1Q9UHV2 236 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 ATAD2Q6PL18 1390 aa7.31□□□□□ -1.24
PTCH1-216ENST00000548379 SERPINB4P48594 390 aa7.3□□□□□ -1.24
PTCH1-216ENST00000548379 CNKSR1Q969H4 720 aa7.3□□□□□ -1.24
PTCH1-216ENST00000548379 EGFL7Q9UHF1 273 aa7.3□□□□□ -1.24
PTCH1-216ENST00000548379 SOWAHDA6NJG2 315 aa7.29□□□□□ -1.24
PTCH1-216ENST00000548379 CDK2AP1O14519 115 aa7.29□□□□□ -1.24
PTCH1-216ENST00000548379 CAPN12Q6ZSI9 719 aa7.29□□□□□ -1.24
PTCH1-216ENST00000548379 SCG3Q8WXD2 468 aaKnown RBP7.29□□□□□ -1.24
PTCH1-216ENST00000548379 AGBL1Q96MI9 1066 aa7.29□□□□□ -1.24
PTCH1-216ENST00000548379 USP3Q9Y6I4 520 aa7.29□□□□□ -1.24
PTCH1-216ENST00000548379 PTCD1O75127 700 aaKnown RBP7.28□□□□□ -1.24
PTCH1-216ENST00000548379 MFAP1P55081 439 aaKnown RBP7.28□□□□□ -1.24
PTCH1-216ENST00000548379 CENPCQ03188 943 aa7.28□□□□□ -1.24
PTCH1-216ENST00000548379 SLC9A9Q8IVB4 645 aa7.28□□□□□ -1.24
PTCH1-216ENST00000548379 C2orf49Q9BVC5 232 aaPredicted RBP7.28□□□□□ -1.24
PTCH1-216ENST00000548379 MTMR7Q9Y216 660 aa7.28□□□□□ -1.24
PTCH1-216ENST00000548379 AVPP01185 164 aa7.27□□□□□ -1.25
PTCH1-216ENST00000548379 TLR1Q15399 786 aa7.27□□□□□ -1.25
PTCH1-216ENST00000548379 RGS22Q8NE09 1264 aa7.27□□□□□ -1.25
PTCH1-216ENST00000548379 SEPT3Q9UH03 358 aa7.27□□□□□ -1.25
PTCH1-216ENST00000548379 GPC1P35052 558 aa7.26□□□□□ -1.25
PTCH1-216ENST00000548379 HIRAP54198 1017 aaPredicted RBP7.26□□□□□ -1.25
PTCH1-216ENST00000548379 PSMA6P60900 246 aaKnown RBP7.26□□□□□ -1.25
PTCH1-216ENST00000548379 RELBQ01201 579 aa7.26□□□□□ -1.25
PTCH1-216ENST00000548379 ECM1Q16610 540 aa7.26□□□□□ -1.25
PTCH1-216ENST00000548379 PPARGC1BQ86YN6 1023 aaKnown RBP7.26□□□□□ -1.25
PTCH1-216ENST00000548379 SPINT1O43278 529 aa7.25□□□□□ -1.25
PTCH1-216ENST00000548379 PPP1R12BO60237 982 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-216ENST00000548379 ICMTO60725 284 aa7.25□□□□□ -1.25
PTCH1-216ENST00000548379 TEAD4Q15561 434 aa7.25□□□□□ -1.25
PTCH1-216ENST00000548379 GTF3C2Q8WUA4 911 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-216ENST00000548379 TSEN34Q9BSV6 310 aaKnown RBP7.25□□□□□ -1.25
PTCH1-216ENST00000548379 GRIP2Q9C0E4 1043 aa7.25□□□□□ -1.25
PTCH1-216ENST00000548379 ZNF395Q9H8N7 513 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-216ENST00000548379 DNMT3AQ9Y6K1 912 aaPredicted RBP7.25□□□□□ -1.25
PTCH1-216ENST00000548379 EML1O00423 815 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 CAPN5O15484 640 aaPredicted RBP7.24□□□□□ -1.25
PTCH1-216ENST00000548379 NPR3P17342 541 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 RNF144AP50876 292 aaPredicted RBP7.24□□□□□ -1.25
PTCH1-216ENST00000548379 CCDC27Q2M243 656 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 TBCELQ5QJ74 424 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 NBPF15Q8N660 670 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 ZDHHC1Q8WTX9 485 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 MKNK1Q9BUB5 465 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 PDZRN3Q9UPQ7 1066 aa7.24□□□□□ -1.25
PTCH1-216ENST00000548379 MEN1O00255 615 aa7.23□□□□□ -1.25
PTCH1-216ENST00000548379 LINC00528Q8N1L1 170 aa7.23□□□□□ -1.25
PTCH1-216ENST00000548379 MYO19Q96H55 970 aa7.23□□□□□ -1.25
PTCH1-216ENST00000548379 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
PTCH1-216ENST00000548379 SMCPP49901 116 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 FKBP4Q02790 459 aaKnown RBP eCLIP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 ZNF211Q13398 564 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 SF3B2Q13435 895 aaKnown RBP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 HELQQ8TDG4 1101 aa7.22□□□□□ -1.25
PTCH1-216ENST00000548379 ZSCAN10Q96SZ4 725 aaPredicted RBP7.22□□□□□ -1.25
PTCH1-216ENST00000548379 SAP130Q9H0E3 1048 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms