RNA–Protein interactions for RNA: ENST00000548283.6

TMEM116-206, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 3,640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-206ENST00000548283 LMOD3Q0VAK6 560 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 ZNF335Q9H4Z2 1342 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-206ENST00000548283 ARHGAP45Q92619 1136 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 RARSP54136 660 aaKnown RBP9.33□□□□□ -0.92
TMEM116-206ENST00000548283 CALD1Q05682 793 aaKnown RBP9.33□□□□□ -0.92
TMEM116-206ENST00000548283 HSP90AB2PQ58FF8 381 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 TNS2Q63HR2 1409 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 EYA1Q99502 592 aa9.33□□□□□ -0.92
TMEM116-206ENST00000548283 COL5A3P25940 1745 aaPredicted RBP9.33□□□□□ -0.92
TMEM116-206ENST00000548283 KCPQ6ZWJ8 1503 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 NCLP19338 710 aaKnown RBP9.32□□□□□ -0.92
TMEM116-206ENST00000548283 RRS1Q15050 365 aaKnown RBP9.32□□□□□ -0.92
TMEM116-206ENST00000548283 NGDNQ8NEJ9 315 aaKnown RBP9.32□□□□□ -0.92
TMEM116-206ENST00000548283 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 GCP02774 474 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 TJP1Q07157 1748 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 MEGF6O75095 1541 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 ERBB3P21860 1342 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 CCDC146Q8IYE0 955 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 SLIT2O94813 1529 aa9.32□□□□□ -0.92
TMEM116-206ENST00000548283 MAP3K5Q99683 1374 aa9.31□□□□□ -0.92
TMEM116-206ENST00000548283 PRKAR2BP31323 418 aa9.31□□□□□ -0.92
TMEM116-206ENST00000548283 U2AF1L5P0DN76 240 aaPredicted RBP9.31□□□□□ -0.92
TMEM116-206ENST00000548283 U2AF1Q01081 240 aaKnown RBP eCLIP9.31□□□□□ -0.921e-6■■□□□ 12.9
TMEM116-206ENST00000548283 CLSTN1O94985 981 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 ESCO1Q5FWF5 840 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 SLAIN2Q9P270 581 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 HSPA2P54652 639 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 ABTB2Q8N961 1025 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 IPO9Q96P70 1041 aaKnown RBP9.3□□□□□ -0.92
TMEM116-206ENST00000548283 BCL9O00512 1426 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
TMEM116-206ENST00000548283 FBLN1P23142 703 aa9.3□□□□□ -0.92
TMEM116-206ENST00000548283 ATF3P18847 181 aa9.29□□□□□ -0.92
TMEM116-206ENST00000548283 ILDR1Q86SU0 546 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-206ENST00000548283 ARFGEF2Q9Y6D5 1785 aa9.29□□□□□ -0.92
TMEM116-206ENST00000548283 ABCC4O15439 1325 aa9.29□□□□□ -0.92
TMEM116-206ENST00000548283 NLRP6P59044 892 aa9.29□□□□□ -0.92
TMEM116-206ENST00000548283 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
TMEM116-206ENST00000548283 NKX1-1Q15270 411 aaPredicted RBP9.28□□□□□ -0.92
TMEM116-206ENST00000548283 ANKRD36CQ5JPF3 1778 aa9.28□□□□□ -0.92
TMEM116-206ENST00000548283 HOXB7P09629 217 aa9.28□□□□□ -0.92
TMEM116-206ENST00000548283 RIPK4P57078 832 aa9.28□□□□□ -0.92
TMEM116-206ENST00000548283 GNAI1P63096 354 aa9.28□□□□□ -0.92
TMEM116-206ENST00000548283 NHSQ6T4R5 1651 aa9.28□□□□□ -0.92
TMEM116-206ENST00000548283 VAMP4O75379 141 aa9.27□□□□□ -0.92
TMEM116-206ENST00000548283 GAS2L2Q8NHY3 880 aa9.27□□□□□ -0.92
TMEM116-206ENST00000548283 BCORQ6W2J9 1755 aa9.27□□□□□ -0.92
TMEM116-206ENST00000548283 LAMB2P55268 1798 aa9.27□□□□□ -0.93
TMEM116-206ENST00000548283 MTHFSDQ2M296 383 aaKnown RBP9.27□□□□□ -0.93
TMEM116-206ENST00000548283 ATP10DQ9P241 1426 aa9.27□□□□□ -0.93
TMEM116-206ENST00000548283 LY75O60449 1722 aa9.27□□□□□ -0.93
TMEM116-206ENST00000548283 AXIN2Q9Y2T1 843 aa9.27□□□□□ -0.93
TMEM116-206ENST00000548283 DOT1LQ8TEK3 1739 aa9.27□□□□□ -0.93
TMEM116-206ENST00000548283 AMOTQ4VCS5 1084 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 MAPK8IP3Q9UPT6 1336 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 RBM10P98175 930 aaKnown RBP9.26□□□□□ -0.93
TMEM116-206ENST00000548283 NBPF6Q5VWK0 638 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 NBPF4Q96M43 638 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
TMEM116-206ENST00000548283 MBIPQ9NS73 344 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 SBF2Q86WG5 1849 aa9.26□□□□□ -0.93
TMEM116-206ENST00000548283 MRPL50Q8N5N7 158 aaKnown RBP9.25□□□□□ -0.93
TMEM116-206ENST00000548283 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
TMEM116-206ENST00000548283 FOSBP53539 338 aa9.25□□□□□ -0.93
TMEM116-206ENST00000548283 RETREG2Q8NC44 543 aa9.25□□□□□ -0.93
TMEM116-206ENST00000548283 AKAP4Q5JQC9 854 aa9.25□□□□□ -0.93
TMEM116-206ENST00000548283 SULT6B1Q6IMI4 303 aa9.25□□□□□ -0.93
TMEM116-206ENST00000548283 WDR17Q8IZU2 1322 aa9.24□□□□□ -0.93
TMEM116-206ENST00000548283 OS9Q13438 667 aaPredicted RBP9.24□□□□□ -0.93
TMEM116-206ENST00000548283 COL15A1P39059 1388 aa9.24□□□□□ -0.93
TMEM116-206ENST00000548283 CASZ1Q86V15 1759 aa9.24□□□□□ -0.93
TMEM116-206ENST00000548283 FOXO3O43524 673 aa9.24□□□□□ -0.93
TMEM116-206ENST00000548283 KIF16BQ96L93 1317 aa9.23□□□□□ -0.93
TMEM116-206ENST00000548283 PTPRCP08575 1304 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 GNAT3A8MTJ3 354 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 SLC4A2P04920 1241 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 FOXD4L6Q3SYB3 417 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-206ENST00000548283 FOXD4L3Q6VB84 417 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-206ENST00000548283 IL17REQ8NFR9 667 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.22□□□□□ -0.93
TMEM116-206ENST00000548283 ZC3H15Q8WU90 426 aaKnown RBP9.22□□□□□ -0.93
TMEM116-206ENST00000548283 PLCD4Q9BRC7 762 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 U2SURPO15042 1029 aaKnown RBP9.22□□□□□ -0.93
TMEM116-206ENST00000548283 ANKRD24Q8TF21 1146 aa9.22□□□□□ -0.93
TMEM116-206ENST00000548283 SKAP1Q86WV1 359 aa9.21□□□□□ -0.93
TMEM116-206ENST00000548283 KAT6BQ8WYB5 2073 aa9.21□□□□□ -0.93
TMEM116-206ENST00000548283 MS4A1P11836 297 aa9.21□□□□□ -0.94
TMEM116-206ENST00000548283 AMPHP49418 695 aa9.21□□□□□ -0.94
TMEM116-206ENST00000548283 C20orf194Q5TEA3 1177 aa9.21□□□□□ -0.94
TMEM116-206ENST00000548283 CARD10Q9BWT7 1032 aa9.21□□□□□ -0.94
TMEM116-206ENST00000548283 BCAR3O75815 825 aa9.2□□□□□ -0.94
TMEM116-206ENST00000548283 HMOX1P09601 288 aa9.2□□□□□ -0.94
TMEM116-206ENST00000548283 EXOSC9Q06265 439 aaKnown RBP9.2□□□□□ -0.94
TMEM116-206ENST00000548283 INTS3Q68E01 1043 aaKnown RBP9.2□□□□□ -0.94
TMEM116-206ENST00000548283 HDAC1Q13547 482 aaPredicted RBP9.2□□□□□ -0.94
TMEM116-206ENST00000548283 IRF5Q13568 498 aa9.2□□□□□ -0.94
TMEM116-206ENST00000548283 NOL8Q76FK4 1167 aaKnown RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms