RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 ADAMTS7Q9UKP4 1686 aa26.35■■□□□ 1.81
RITA1-201ENST00000548278 GCC1Q96CN9 775 aa26.34■■□□□ 1.81
RITA1-201ENST00000548278 FLIIQ13045 1269 aa26.33■■□□□ 1.81
RITA1-201ENST00000548278 NECTIN2Q92692 538 aa26.33■■□□□ 1.81
RITA1-201ENST00000548278 BTBD11A6QL63 1104 aa26.32■■□□□ 1.8
RITA1-201ENST00000548278 RAPGEF4Q8WZA2 1011 aa26.32■■□□□ 1.8
RITA1-201ENST00000548278 F6X3S4 739 aa26.32■■□□□ 1.8
RITA1-201ENST00000548278 KCNQ3O43525 872 aa26.32■■□□□ 1.8
RITA1-201ENST00000548278 HOXB7P09629 217 aa26.32■■□□□ 1.8
RITA1-201ENST00000548278 CCT4P50991 539 aaKnown RBP26.31■■□□□ 1.8
RITA1-201ENST00000548278 HDGFL1Q5TGJ6 251 aa26.31■■□□□ 1.8
RITA1-201ENST00000548278 SIPA1L3O60292 1781 aaPredicted RBP26.31■■□□□ 1.8
RITA1-201ENST00000548278 ATP10DQ9P241 1426 aa26.31■■□□□ 1.8
RITA1-201ENST00000548278 CSB-PGBD3P0DP91 1061 aa26.3■■□□□ 1.8
RITA1-201ENST00000548278 CHD1LQ86WJ1 897 aa26.3■■□□□ 1.8
RITA1-201ENST00000548278 MEGF6O75095 1541 aa26.3■■□□□ 1.8
RITA1-201ENST00000548278 MEIS3Q99687 375 aa26.29■■□□□ 1.8
RITA1-201ENST00000548278 NOP58Q9Y2X3 529 aaKnown RBP26.29■■□□□ 1.8
RITA1-201ENST00000548278 PLEKHG2Q9H7P9 1386 aa26.29■■□□□ 1.8
RITA1-201ENST00000548278 TATP17735 454 aaPredicted RBP26.29■■□□□ 1.8
RITA1-201ENST00000548278 SLC4A10Q6U841 1118 aa26.28■■□□□ 1.8
RITA1-201ENST00000548278 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.28■■□□□ 1.8
RITA1-201ENST00000548278 FKBP5Q13451 457 aaPredicted RBP26.27■■□□□ 1.8
RITA1-201ENST00000548278 ANKRD44Q8N8A2 993 aa26.27■■□□□ 1.8
RITA1-201ENST00000548278 LNPKQ9C0E8 428 aa26.27■■□□□ 1.8
RITA1-201ENST00000548278 RPAP2Q8IXW5 612 aaPredicted RBP26.26■■□□□ 1.79
RITA1-201ENST00000548278 SPG7Q9UQ90 795 aa26.26■■□□□ 1.79
RITA1-201ENST00000548278 N4BP2Q86UW6 1770 aaPredicted RBP26.25■■□□□ 1.79
RITA1-201ENST00000548278 NHSL1Q5SYE7 1610 aa26.25■■□□□ 1.79
RITA1-201ENST00000548278 ANKRD45Q5TZF3 282 aa26.25■■□□□ 1.79
RITA1-201ENST00000548278 CEP85Q6P2H3 762 aa26.25■■□□□ 1.79
RITA1-201ENST00000548278 SCN11AQ9UI33 1791 aa26.25■■□□□ 1.79
RITA1-201ENST00000548278 HEG1Q9ULI3 1381 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 CHMP4AQ9BY43 222 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 DCTPP1Q9H773 170 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 ZBTB47Q9UFB7 747 aaPredicted RBP26.24■■□□□ 1.79
RITA1-201ENST00000548278 SEC24BO95487 1268 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 PHKG2P15735 406 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 ERICH6Q7L0X2 663 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 ABCA3Q99758 1704 aa26.24■■□□□ 1.79
RITA1-201ENST00000548278 EIF2S2P20042 333 aaKnown RBP26.23■■□□□ 1.79
RITA1-201ENST00000548278 ANP32EQ9BTT0 268 aa26.23■■□□□ 1.79
RITA1-201ENST00000548278 KDM6AO15550 1401 aaPredicted RBP26.23■■□□□ 1.79
RITA1-201ENST00000548278 PKD1L3Q7Z443 1732 aa26.23■■□□□ 1.79
RITA1-201ENST00000548278 PXDNLA1KZ92 1463 aa26.23■■□□□ 1.79
RITA1-201ENST00000548278 PRDM11Q9NQV5 511 aa26.23■■□□□ 1.79
RITA1-201ENST00000548278 PHAXQ9H814 394 aaKnown RBP26.22■■□□□ 1.79
RITA1-201ENST00000548278 CHPF2Q9P2E5 772 aa26.21■■□□□ 1.79
RITA1-201ENST00000548278 DDRGK1Q96HY6 314 aa26.2■■□□□ 1.78
RITA1-201ENST00000548278 GIGYF1O75420 1035 aaPredicted RBP26.19■■□□□ 1.78
RITA1-201ENST00000548278 IFNL2Q8IZJ0 200 aa26.19■■□□□ 1.78
RITA1-201ENST00000548278 WDR17Q8IZU2 1322 aa26.19■■□□□ 1.78
RITA1-201ENST00000548278 SLC52A2Q9HAB3 445 aa26.18■■□□□ 1.78
RITA1-201ENST00000548278 CYP27B1O15528 508 aa26.17■■□□□ 1.78
RITA1-201ENST00000548278 COL5A2P05997 1499 aaPredicted RBP26.16■■□□□ 1.78
RITA1-201ENST00000548278 GNAI2P04899 355 aa26.16■■□□□ 1.78
RITA1-201ENST00000548278 GNAI3P08754 354 aa26.15■■□□□ 1.78
RITA1-201ENST00000548278 MRC1P22897 1456 aa26.15■■□□□ 1.78
RITA1-201ENST00000548278 DCAF5Q96JK2 942 aa26.14■■□□□ 1.77
RITA1-201ENST00000548278 DBF4Q9UBU7 674 aaPredicted RBP26.14■■□□□ 1.77
RITA1-201ENST00000548278 ZNF790Q6PG37 636 aa26.13■■□□□ 1.77
RITA1-201ENST00000548278 NFATC2IPQ8NCF5 419 aa26.13■■□□□ 1.77
RITA1-201ENST00000548278 PARP4Q9UKK3 1724 aaKnown RBP26.12■■□□□ 1.77
RITA1-201ENST00000548278 PRAMEF22A3QJZ6 481 aa26.12■■□□□ 1.77
RITA1-201ENST00000548278 HMMRO75330 724 aa26.12■■□□□ 1.77
RITA1-201ENST00000548278 BMP2KLQ5H9B9 411 aa26.12■■□□□ 1.77
RITA1-201ENST00000548278 TOM1L2Q6ZVM7 507 aa26.12■■□□□ 1.77
RITA1-201ENST00000548278 ANXA1P04083 346 aa26.11■■□□□ 1.77
RITA1-201ENST00000548278 HSP90AB1P08238 724 aaKnown RBP26.11■■□□□ 1.77
RITA1-201ENST00000548278 USP44Q9H0E7 712 aa26.11■■□□□ 1.77
RITA1-201ENST00000548278 SLC39A6Q13433 755 aa26.1■■□□□ 1.77
RITA1-201ENST00000548278 PI4KAP2A4QPH2 592 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 PROSER3Q2NL68 480 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 PI4KAP1Q8N8J0 262 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 DNAAF4Q8WXU2 420 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 SRCIN1Q9C0H9 1055 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 ADCY9O60503 1353 aa26.09■■□□□ 1.77
RITA1-201ENST00000548278 CARD10Q9BWT7 1032 aa26.08■■□□□ 1.77
RITA1-201ENST00000548278 UPF2Q9HAU5 1272 aaKnown RBP26.08■■□□□ 1.77
RITA1-201ENST00000548278 BEND3Q5T5X7 828 aa26.07■■□□□ 1.76
RITA1-201ENST00000548278 PLEKHM2Q8IWE5 1019 aa26.07■■□□□ 1.76
RITA1-201ENST00000548278 TBC1D32Q96NH3 1257 aa26.07■■□□□ 1.76
RITA1-201ENST00000548278 C5P01031 1676 aa26.07■■□□□ 1.76
RITA1-201ENST00000548278 ATP8B2P98198 1209 aa26.06■■□□□ 1.76
RITA1-201ENST00000548278 ZCRB1Q8TBF4 217 aaKnown RBP26.06■■□□□ 1.76
RITA1-201ENST00000548278 LRRFIP2Q9Y608 721 aaKnown RBP26.06■■□□□ 1.76
RITA1-201ENST00000548278 HYPKQ9NX55 129 aa26.05■■□□□ 1.76
RITA1-201ENST00000548278 UBTFL1P0CB47 393 aaPredicted RBP26.05■■□□□ 1.76
RITA1-201ENST00000548278 PCDH11XQ9BZA7 1347 aa26.05■■□□□ 1.76
RITA1-201ENST00000548278 PCDH11YQ9BZA8 1340 aa26.05■■□□□ 1.76
RITA1-201ENST00000548278 PDIA6Q15084 440 aa26.04■■□□□ 1.76
RITA1-201ENST00000548278 LARP1Q6PKG0 1096 aaKnown RBP26.04■■□□□ 1.76
RITA1-201ENST00000548278 C16orf71Q8IYS4 520 aaPredicted RBP26.04■■□□□ 1.76
RITA1-201ENST00000548278 DDX21Q9NR30 783 aaKnown RBP eCLIP26.04■■□□□ 1.76
RITA1-201ENST00000548278 ZNF496Q96IT1 587 aaPredicted RBP26.03■■□□□ 1.76
RITA1-201ENST00000548278 ROBO1Q9Y6N7 1651 aa26.03■■□□□ 1.76
RITA1-201ENST00000548278 PNMA6EA0A0J9YXQ4 647 aa26.03■■□□□ 1.76
RITA1-201ENST00000548278 STRN4Q9NRL3 753 aa26.03■■□□□ 1.76
RITA1-201ENST00000548278 IL2RBP14784 551 aa26.02■■□□□ 1.76
RITA1-201ENST00000548278 CABP4P57796 275 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms