RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 COL5A3P25940 1745 aaPredicted RBP27.65■■■□□ 2.02
GATC-202ENST00000548171 TRIM26Q12899 539 aaPredicted RBP27.65■■■□□ 2.02
GATC-202ENST00000548171 KDRP35968 1356 aa27.64■■■□□ 2.02
GATC-202ENST00000548171 EIF4A2Q14240 407 aaKnown RBP27.64■■■□□ 2.02
GATC-202ENST00000548171 MMP10P09238 476 aa27.63■■■□□ 2.01
GATC-202ENST00000548171 ZNF526Q8TF50 670 aaPredicted RBP27.63■■■□□ 2.01
GATC-202ENST00000548171 CEP350Q5VT06 3117 aa27.63■■■□□ 2.01
GATC-202ENST00000548171 KIAA1551Q9HCM1 1747 aa27.63■■■□□ 2.01
GATC-202ENST00000548171 ERVV-2B6SEH9 535 aa27.62■■■□□ 2.01
GATC-202ENST00000548171 HSP90AB1P08238 724 aaKnown RBP27.62■■■□□ 2.01
GATC-202ENST00000548171 WWC3Q9ULE0 1092 aa27.62■■■□□ 2.01
GATC-202ENST00000548171 RTCBQ9Y3I0 505 aaKnown RBP27.62■■■□□ 2.01
GATC-202ENST00000548171 N4BP2Q86UW6 1770 aaPredicted RBP27.61■■■□□ 2.01
GATC-202ENST00000548171 HSPA6P17066 643 aa27.61■■■□□ 2.01
GATC-202ENST00000548171 TRAPPC3LQ5T215 181 aa27.61■■■□□ 2.01
GATC-202ENST00000548171 NLGN1Q8N2Q7 840 aa27.61■■■□□ 2.01
GATC-202ENST00000548171 ADRA2BP18089 450 aa27.6■■■□□ 2.01
GATC-202ENST00000548171 DCAF5Q96JK2 942 aa27.6■■■□□ 2.01
GATC-202ENST00000548171 PXDNLA1KZ92 1463 aa27.59■■■□□ 2.01
GATC-202ENST00000548171 TGFB2P61812 414 aa27.59■■■□□ 2.01
GATC-202ENST00000548171 TNNT2P45379 298 aaPredicted RBP27.58■■■□□ 2.01
GATC-202ENST00000548171 RC3H1Q5TC82 1133 aaKnown RBP27.58■■■□□ 2.01
GATC-202ENST00000548171 IFFO2Q5TF58 517 aa27.58■■■□□ 2.01
GATC-202ENST00000548171 C4AP0C0L4 1744 aa27.57■■■□□ 2
GATC-202ENST00000548171 BRCA1P38398 1863 aaKnown RBP27.56■■■□□ 2
GATC-202ENST00000548171 PLEKHO1Q53GL0 409 aaPredicted RBP27.56■■■□□ 2
GATC-202ENST00000548171 RBM42Q9BTD8 480 aaKnown RBP27.56■■■□□ 2
GATC-202ENST00000548171 CNTNAP4Q9C0A0 1308 aa27.56■■■□□ 2
GATC-202ENST00000548171 C10orf71Q711Q0 1435 aa27.56■■■□□ 2
GATC-202ENST00000548171 MYH14Q7Z406 1995 aaKnown RBP27.55■■■□□ 2
GATC-202ENST00000548171 SLC4A9Q96Q91 983 aa27.55■■■□□ 2
GATC-202ENST00000548171 POLR3GLQ9BT43 218 aa27.55■■■□□ 2
GATC-202ENST00000548171 AMOTQ4VCS5 1084 aa27.54■■■□□ 2
GATC-202ENST00000548171 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
GATC-202ENST00000548171 ARHGEF1Q92888 912 aaKnown RBP27.53■■■□□ 2
GATC-202ENST00000548171 KIF3CO14782 793 aa27.52■■■□□ 2
GATC-202ENST00000548171 RPS6KA4O75676 772 aa27.52■■■□□ 2
GATC-202ENST00000548171 RFC4P35249 363 aa27.52■■■□□ 2
GATC-202ENST00000548171 CCDC87Q9NVE4 849 aa27.52■■■□□ 2
GATC-202ENST00000548171 KDM6AO15550 1401 aaPredicted RBP27.51■■□□□ 1.99
GATC-202ENST00000548171 CABP4P57796 275 aa27.51■■□□□ 1.99
GATC-202ENST00000548171 ZNF530Q6P9A1 599 aaPredicted RBP27.51■■□□□ 1.99
GATC-202ENST00000548171 ARFGEF1Q9Y6D6 1849 aa27.51■■□□□ 1.99
GATC-202ENST00000548171 GYS1P13807 737 aa27.5■■□□□ 1.99
GATC-202ENST00000548171 BCS1LQ9Y276 419 aa27.5■■□□□ 1.99
GATC-202ENST00000548171 A0A0G2JLW4 131 aa27.49■■□□□ 1.99
GATC-202ENST00000548171 PARP3Q9Y6F1 533 aa27.49■■□□□ 1.99
GATC-202ENST00000548171 MTHFSP49914 203 aa27.47■■□□□ 1.99
GATC-202ENST00000548171 C1orf141Q5JVX7 400 aa27.47■■□□□ 1.99
GATC-202ENST00000548171 PANK3Q9H999 370 aa27.47■■□□□ 1.99
GATC-202ENST00000548171 SCN11AQ9UI33 1791 aa27.47■■□□□ 1.99
GATC-202ENST00000548171 DPEP1P16444 411 aa27.45■■□□□ 1.98
GATC-202ENST00000548171 EIF4G2P78344 907 aaKnown RBP eCLIP27.44■■□□□ 1.98
GATC-202ENST00000548171 ARHGAP27Q6ZUM4 889 aa27.44■■□□□ 1.98
GATC-202ENST00000548171 TJP1Q07157 1748 aa27.44■■□□□ 1.98
GATC-202ENST00000548171 TOMM70O94826 608 aa27.43■■□□□ 1.98
GATC-202ENST00000548171 PTCD1O75127 700 aaKnown RBP27.42■■□□□ 1.98
GATC-202ENST00000548171 FCHSD2O94868 740 aa27.42■■□□□ 1.98
GATC-202ENST00000548171 CRKLP46109 303 aaKnown RBP27.41■■□□□ 1.98
GATC-202ENST00000548171 APLP1P51693 650 aa27.41■■□□□ 1.98
GATC-202ENST00000548171 MORC1Q86VD1 984 aa27.41■■□□□ 1.98
GATC-202ENST00000548171 AEBP1Q8IUX7 1158 aa27.41■■□□□ 1.98
GATC-202ENST00000548171 NFATC2IPQ8NCF5 419 aa27.41■■□□□ 1.98
GATC-202ENST00000548171 USP42Q9H9J4 1324 aaKnown RBP27.4■■□□□ 1.98
GATC-202ENST00000548171 HSPA5P11021 654 aaKnown RBP27.38■■□□□ 1.97
GATC-202ENST00000548171 KCNA3P22001 575 aa27.38■■□□□ 1.97
GATC-202ENST00000548171 SULT6B1Q6IMI4 303 aa27.38■■□□□ 1.97
GATC-202ENST00000548171 PIM2Q9P1W9 311 aa27.38■■□□□ 1.97
GATC-202ENST00000548171 VIRMAQ69YN4 1812 aaKnown RBP27.38■■□□□ 1.97
GATC-202ENST00000548171 ADAMTS7Q9UKP4 1686 aa27.36■■□□□ 1.97
GATC-202ENST00000548171 FKBP8Q14318 412 aa27.35■■□□□ 1.97
GATC-202ENST00000548171 SBF1O95248 1867 aa27.34■■□□□ 1.97
GATC-202ENST00000548171 DALRD3Q5D0E6 543 aaKnown RBP27.34■■□□□ 1.97
GATC-202ENST00000548171 NMRK2Q9NPI5 230 aa27.34■■□□□ 1.97
GATC-202ENST00000548171 SRP68Q9UHB9 627 aaKnown RBP27.34■■□□□ 1.97
GATC-202ENST00000548171 IL13P35225 146 aa27.33■■□□□ 1.97
GATC-202ENST00000548171 DDR1Q08345 913 aa27.33■■□□□ 1.97
GATC-202ENST00000548171 C9orf131Q5VYM1 1079 aa27.33■■□□□ 1.97
GATC-202ENST00000548171 KNSTRNQ9Y448 316 aa27.33■■□□□ 1.97
GATC-202ENST00000548171 AKAP4Q5JQC9 854 aa27.32■■□□□ 1.96
GATC-202ENST00000548171 PCGF6Q9BYE7 350 aa27.32■■□□□ 1.96
GATC-202ENST00000548171 WDR90Q96KV7 1748 aa27.31■■□□□ 1.96
GATC-202ENST00000548171 INTS5Q6P9B9 1019 aaKnown RBP27.31■■□□□ 1.96
GATC-202ENST00000548171 RBM46Q8TBY0 533 aaKnown RBP27.31■■□□□ 1.96
GATC-202ENST00000548171 SLC52A2Q9HAB3 445 aa27.3■■□□□ 1.96
GATC-202ENST00000548171 MRC1P22897 1456 aa27.3■■□□□ 1.96
GATC-202ENST00000548171 ZPR1O75312 459 aa27.29■■□□□ 1.96
GATC-202ENST00000548171 KDM2BQ8NHM5 1336 aa27.29■■□□□ 1.96
GATC-202ENST00000548171 TNRC6CQ9HCJ0 1690 aaKnown RBP27.29■■□□□ 1.96
GATC-202ENST00000548171 AFDNP55196 1824 aaKnown RBP27.29■■□□□ 1.96
GATC-202ENST00000548171 POLRMTO00411 1230 aaKnown RBP27.28■■□□□ 1.96
GATC-202ENST00000548171 TM4SF1P30408 202 aa27.28■■□□□ 1.96
GATC-202ENST00000548171 C16orf71Q8IYS4 520 aaPredicted RBP27.28■■□□□ 1.96
GATC-202ENST00000548171 DNAJC10Q8IXB1 793 aa27.27■■□□□ 1.96
GATC-202ENST00000548171 DNAJC5GQ8N7S2 189 aa27.27■■□□□ 1.96
GATC-202ENST00000548171 SOS1Q07889 1333 aaPredicted RBP27.26■■□□□ 1.95
GATC-202ENST00000548171 DLEC1Q9Y238 1755 aa27.25■■□□□ 1.95
GATC-202ENST00000548171 NRXN2Q9P2S2 1712 aa27.25■■□□□ 1.95
GATC-202ENST00000548171 CHRNA5P30532 468 aa27.25■■□□□ 1.95
GATC-202ENST00000548171 USPL1Q5W0Q7 1092 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms