RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 CDCA7Q9BWT1 371 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-205ENST00000548086 SIPA1L3O60292 1781 aaPredicted RBP14.32□□□□□ -0.12
SCN8A-205ENST00000548086 CHL1O00533 1208 aa14.31□□□□□ -0.12
SCN8A-205ENST00000548086 EXOSC9Q06265 439 aaKnown RBP14.31□□□□□ -0.12
SCN8A-205ENST00000548086 MARCH10Q8NA82 808 aaPredicted RBP14.31□□□□□ -0.12
SCN8A-205ENST00000548086 DCAF5Q96JK2 942 aa14.31□□□□□ -0.12
SCN8A-205ENST00000548086 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
SCN8A-205ENST00000548086 TSPYL4Q9UJ04 414 aa14.31□□□□□ -0.12
SCN8A-205ENST00000548086 ELL2O00472 640 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-205ENST00000548086 MSH5O43196 834 aa14.3□□□□□ -0.12
SCN8A-205ENST00000548086 KCNQ3O43525 872 aa14.3□□□□□ -0.12
SCN8A-205ENST00000548086 TAF7Q15545 349 aaPredicted RBP14.3□□□□□ -0.12
SCN8A-205ENST00000548086 FAM182BQ5T319 152 aa14.3□□□□□ -0.12
SCN8A-205ENST00000548086 NFATC2IPQ8NCF5 419 aa14.3□□□□□ -0.12
SCN8A-205ENST00000548086 KAT6BQ8WYB5 2073 aa14.3□□□□□ -0.12
SCN8A-205ENST00000548086 HSP90AB1P08238 724 aaKnown RBP14.29□□□□□ -0.12
SCN8A-205ENST00000548086 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-205ENST00000548086 TSPYL6Q8N831 410 aa14.29□□□□□ -0.12
SCN8A-205ENST00000548086 ZNF772Q68DY9 489 aaPredicted RBP14.29□□□□□ -0.12
SCN8A-205ENST00000548086 SLC52A2Q9HAB3 445 aa14.29□□□□□ -0.12
SCN8A-205ENST00000548086 DOT1LQ8TEK3 1739 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 MRC1P22897 1456 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 SLC39A6Q13433 755 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 C8orf58Q8NAV2 365 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 KDM3BQ7LBC6 1761 aa14.28□□□□□ -0.12
SCN8A-205ENST00000548086 CABP4P57796 275 aa14.27□□□□□ -0.12
SCN8A-205ENST00000548086 ITGB4P16144 1822 aa14.27□□□□□ -0.13
SCN8A-205ENST00000548086 ACSBG1Q96GR2 724 aa14.27□□□□□ -0.13
SCN8A-205ENST00000548086 ONECUT3O60422 494 aaPredicted RBP14.26□□□□□ -0.13
SCN8A-205ENST00000548086 B4GALNT3Q6L9W6 998 aa14.26□□□□□ -0.13
SCN8A-205ENST00000548086 POTEAQ6S8J7 498 aa14.26□□□□□ -0.13
SCN8A-205ENST00000548086 RCAN3Q9UKA8 241 aa14.26□□□□□ -0.13
SCN8A-205ENST00000548086 EP400Q96L91 3159 aa14.26□□□□□ -0.13
SCN8A-205ENST00000548086 BRWD3Q6RI45 1802 aa14.26□□□□□ -0.13
SCN8A-205ENST00000548086 SYTL4Q96C24 671 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-205ENST00000548086 BCL2L13Q9BXK5 485 aa14.25□□□□□ -0.13
SCN8A-205ENST00000548086 ERVV-2B6SEH9 535 aa14.24□□□□□ -0.13
SCN8A-205ENST00000548086 TCERG1O14776 1098 aaKnown RBP14.24□□□□□ -0.13
SCN8A-205ENST00000548086 PRIM1P49642 420 aaKnown RBP14.24□□□□□ -0.13
SCN8A-205ENST00000548086 RBM6P78332 1123 aaKnown RBP14.24□□□□□ -0.13
SCN8A-205ENST00000548086 BCAR3O75815 825 aa14.23□□□□□ -0.13
SCN8A-205ENST00000548086 TWISTNBQ3B726 338 aaPredicted RBP14.23□□□□□ -0.13
SCN8A-205ENST00000548086 PIGBQ92521 554 aa14.23□□□□□ -0.13
SCN8A-205ENST00000548086 TMOD3Q9NYL9 352 aa14.23□□□□□ -0.13
SCN8A-205ENST00000548086 KCNQ2O43526 872 aa14.23□□□□□ -0.13
SCN8A-205ENST00000548086 PRAMEF22A3QJZ6 481 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 VAMP4O75379 141 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 EIF4A1P60842 406 aaKnown RBP14.22□□□□□ -0.13
SCN8A-205ENST00000548086 ZNF790Q6PG37 636 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 PTF1AQ7RTS3 328 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 RXRBP28702 533 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 BABAM1Q9NWV8 329 aa14.22□□□□□ -0.13
SCN8A-205ENST00000548086 PAPPAQ13219 1627 aa14.21□□□□□ -0.13
SCN8A-205ENST00000548086 BCL9O00512 1426 aa14.21□□□□□ -0.13
SCN8A-205ENST00000548086 RGS12O14924 1447 aa14.21□□□□□ -0.13
SCN8A-205ENST00000548086 RARSP54136 660 aaKnown RBP14.21□□□□□ -0.13
SCN8A-205ENST00000548086 NECTIN2Q92692 538 aa14.21□□□□□ -0.13
SCN8A-205ENST00000548086 ASAP1Q9ULH1 1129 aa14.21□□□□□ -0.13
SCN8A-205ENST00000548086 PLIN1O60240 522 aa14.2□□□□□ -0.14
SCN8A-205ENST00000548086 ZNF496Q96IT1 587 aaPredicted RBP14.2□□□□□ -0.14
SCN8A-205ENST00000548086 C5P01031 1676 aa14.2□□□□□ -0.14
SCN8A-205ENST00000548086 PTCD1O75127 700 aaKnown RBP14.2□□□□□ -0.14
SCN8A-205ENST00000548086 TTC5Q8N0Z6 440 aa14.2□□□□□ -0.14
SCN8A-205ENST00000548086 SSH1Q8WYL5 1049 aa14.2□□□□□ -0.14
SCN8A-205ENST00000548086 KRT27Q7Z3Y8 459 aa14.19□□□□□ -0.14
SCN8A-205ENST00000548086 UBR2Q8IWV8 1755 aa14.19□□□□□ -0.14
SCN8A-205ENST00000548086 KCPQ6ZWJ8 1503 aa14.18□□□□□ -0.14
SCN8A-205ENST00000548086 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
SCN8A-205ENST00000548086 SMC4Q9NTJ3 1288 aa14.18□□□□□ -0.14
SCN8A-205ENST00000548086 SBF2Q86WG5 1849 aa14.18□□□□□ -0.14
SCN8A-205ENST00000548086 GIGYF1O75420 1035 aaPredicted RBP14.17□□□□□ -0.14
SCN8A-205ENST00000548086 EIF2S2P20042 333 aaKnown RBP14.17□□□□□ -0.14
SCN8A-205ENST00000548086 HEG1Q9ULI3 1381 aa14.17□□□□□ -0.14
SCN8A-205ENST00000548086 CT47B1P0C2W7 299 aaPredicted RBP14.16□□□□□ -0.14
SCN8A-205ENST00000548086 RRP1P56182 461 aaKnown RBP14.16□□□□□ -0.14
SCN8A-205ENST00000548086 NHSQ6T4R5 1651 aa14.16□□□□□ -0.14
SCN8A-205ENST00000548086 FRAT1Q92837 279 aaPredicted RBP14.16□□□□□ -0.14
SCN8A-205ENST00000548086 FMNL2Q96PY5 1086 aa14.16□□□□□ -0.14
SCN8A-205ENST00000548086 TNNQ9UQP3 1299 aa14.16□□□□□ -0.14
SCN8A-205ENST00000548086 HDGFL1Q5TGJ6 251 aa14.15□□□□□ -0.14
SCN8A-205ENST00000548086 RBM42Q9BTD8 480 aaKnown RBP14.15□□□□□ -0.14
SCN8A-205ENST00000548086 BTAF1O14981 1849 aa14.15□□□□□ -0.14
SCN8A-205ENST00000548086 ANXA1P04083 346 aa14.14□□□□□ -0.15
SCN8A-205ENST00000548086 USP16Q9Y5T5 823 aa14.14□□□□□ -0.15
SCN8A-205ENST00000548086 PIP4K2AP48426 406 aaPredicted RBP14.14□□□□□ -0.15
SCN8A-205ENST00000548086 C20orf194Q5TEA3 1177 aa14.14□□□□□ -0.15
SCN8A-205ENST00000548086 MRPL50Q8N5N7 158 aaKnown RBP14.14□□□□□ -0.15
SCN8A-205ENST00000548086 SLC4A9Q96Q91 983 aa14.14□□□□□ -0.15
SCN8A-205ENST00000548086 ALDH1L2Q3SY69 923 aa14.13□□□□□ -0.15
SCN8A-205ENST00000548086 SNRPA1P09661 255 aaKnown RBP14.13□□□□□ -0.15
SCN8A-205ENST00000548086 CCDC136Q96JN2 1154 aa14.13□□□□□ -0.15
SCN8A-205ENST00000548086 CHPF2Q9P2E5 772 aa14.13□□□□□ -0.15
SCN8A-205ENST00000548086 NOB1Q9ULX3 412 aaKnown RBP14.13□□□□□ -0.15
SCN8A-205ENST00000548086 TRIM37O94972 964 aa14.12□□□□□ -0.15
SCN8A-205ENST00000548086 SLC4A2P04920 1241 aa14.12□□□□□ -0.15
SCN8A-205ENST00000548086 KCNQ4P56696 695 aa14.12□□□□□ -0.15
SCN8A-205ENST00000548086 PROSER3Q2NL68 480 aa14.12□□□□□ -0.15
SCN8A-205ENST00000548086 G2E3Q7L622 706 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms