RNA–Protein interactions for RNA: ENST00000547951.1

USP44-204, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 685 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-204ENST00000547951 GOLGB1Q14789 3259 aaKnown RBP29.18■■■□□ 2.26
USP44-204ENST00000547951 PHF14O94880 888 aa29.17■■■□□ 2.26
USP44-204ENST00000547951 CNGB1Q14028 1251 aaPredicted RBP29.17■■■□□ 2.26
USP44-204ENST00000547951 DCAF5Q96JK2 942 aa29.16■■■□□ 2.26
USP44-204ENST00000547951 SLC4A9Q96Q91 983 aa29.16■■■□□ 2.26
USP44-204ENST00000547951 ERVV-2B6SEH9 535 aa29.15■■■□□ 2.26
USP44-204ENST00000547951 ATP6V1AP38606 617 aa29.15■■■□□ 2.26
USP44-204ENST00000547951 AMOTQ4VCS5 1084 aa29.15■■■□□ 2.26
USP44-204ENST00000547951 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.14■■■□□ 2.26
USP44-204ENST00000547951 FLAD1Q8NFF5 587 aa29.13■■■□□ 2.25
USP44-204ENST00000547951 HSP90AB1P08238 724 aaKnown RBP29.12■■■□□ 2.25
USP44-204ENST00000547951 GNPATO15228 680 aa29.1■■■□□ 2.25
USP44-204ENST00000547951 HMOX1P09601 288 aa29.1■■■□□ 2.25
USP44-204ENST00000547951 SCN11AQ9UI33 1791 aa29.09■■■□□ 2.25
USP44-204ENST00000547951 CABP4P57796 275 aa29.09■■■□□ 2.25
USP44-204ENST00000547951 C1orf141Q5JVX7 400 aa29.09■■■□□ 2.25
USP44-204ENST00000547951 RBM42Q9BTD8 480 aaKnown RBP29.09■■■□□ 2.25
USP44-204ENST00000547951 COL5A3P25940 1745 aaPredicted RBP29.08■■■□□ 2.25
USP44-204ENST00000547951 CHD4Q14839 1912 aa29.08■■■□□ 2.25
USP44-204ENST00000547951 ZNF831Q5JPB2 1677 aa29.08■■■□□ 2.25
USP44-204ENST00000547951 HMGB2P26583 209 aaKnown RBP29.07■■■□□ 2.24
USP44-204ENST00000547951 SSFA2P28290 1259 aa29.07■■■□□ 2.24
USP44-204ENST00000547951 GPR162Q16538 588 aa29.07■■■□□ 2.24
USP44-204ENST00000547951 PELP1Q8IZL8 1130 aaKnown RBP29.07■■■□□ 2.24
USP44-204ENST00000547951 COL3A1P02461 1466 aaPredicted RBP29.06■■■□□ 2.24
USP44-204ENST00000547951 NFATC2IPQ8NCF5 419 aa29.06■■■□□ 2.24
USP44-204ENST00000547951 NPC1L1Q9UHC9 1359 aa29.05■■■□□ 2.24
USP44-204ENST00000547951 VIRMAQ69YN4 1812 aaKnown RBP29.04■■■□□ 2.24
USP44-204ENST00000547951 MYH14Q7Z406 1995 aaKnown RBP29.04■■■□□ 2.24
USP44-204ENST00000547951 DIAPH1O60610 1272 aaKnown RBP29.03■■■□□ 2.24
USP44-204ENST00000547951 PTCD1O75127 700 aaKnown RBP29.02■■■□□ 2.24
USP44-204ENST00000547951 YBX3P16989 372 aaKnown RBP eCLIP29.02■■■□□ 2.24
USP44-204ENST00000547951 LGR6Q9HBX8 967 aa29.02■■■□□ 2.24
USP44-204ENST00000547951 TJP1Q07157 1748 aa29■■■□□ 2.23
USP44-204ENST00000547951 AKAP4Q5JQC9 854 aa29■■■□□ 2.23
USP44-204ENST00000547951 MTHFSDQ2M296 383 aaKnown RBP28.98■■■□□ 2.23
USP44-204ENST00000547951 ZNF784Q8NCA9 323 aaPredicted RBP28.98■■■□□ 2.23
USP44-204ENST00000547951 CD2APQ9Y5K6 639 aa28.97■■■□□ 2.23
USP44-204ENST00000547951 CNTNAP4Q9C0A0 1308 aa28.96■■■□□ 2.23
USP44-204ENST00000547951 RTCBQ9Y3I0 505 aaKnown RBP28.96■■■□□ 2.23
USP44-204ENST00000547951 C4AP0C0L4 1744 aa28.96■■■□□ 2.23
USP44-204ENST00000547951 MRC1P22897 1456 aa28.96■■■□□ 2.23
USP44-204ENST00000547951 ADAMTS7Q9UKP4 1686 aa28.96■■■□□ 2.23
USP44-204ENST00000547951 RNMTO43148 476 aaKnown RBP28.95■■■□□ 2.22
USP44-204ENST00000547951 RC3H1Q5TC82 1133 aaKnown RBP28.95■■■□□ 2.22
USP44-204ENST00000547951 ARHGEF1Q92888 912 aaKnown RBP28.94■■■□□ 2.22
USP44-204ENST00000547951 SLC52A2Q9HAB3 445 aa28.94■■■□□ 2.22
USP44-204ENST00000547951 U2SURPO15042 1029 aaKnown RBP28.93■■■□□ 2.22
USP44-204ENST00000547951 TRAPPC3LQ5T215 181 aa28.93■■■□□ 2.22
USP44-204ENST00000547951 CICQ96RK0 1608 aaPredicted RBP28.93■■■□□ 2.22
USP44-204ENST00000547951 SLC39A6Q13433 755 aa28.92■■■□□ 2.22
USP44-204ENST00000547951 WWC3Q9ULE0 1092 aa28.92■■■□□ 2.22
USP44-204ENST00000547951 RPS6KA4O75676 772 aa28.91■■■□□ 2.22
USP44-204ENST00000547951 MMP10P09238 476 aa28.91■■■□□ 2.22
USP44-204ENST00000547951 CRKLP46109 303 aaKnown RBP28.91■■■□□ 2.22
USP44-204ENST00000547951 KCPQ6ZWJ8 1503 aa28.89■■■□□ 2.21
USP44-204ENST00000547951 GYS1P13807 737 aa28.87■■■□□ 2.21
USP44-204ENST00000547951 DNAJC10Q8IXB1 793 aa28.87■■■□□ 2.21
USP44-204ENST00000547951 ADRA2BP18089 450 aa28.86■■■□□ 2.21
USP44-204ENST00000547951 INTS5Q6P9B9 1019 aaKnown RBP28.86■■■□□ 2.21
USP44-204ENST00000547951 SRP68Q9UHB9 627 aaKnown RBP28.86■■■□□ 2.21
USP44-204ENST00000547951 KIAA1551Q9HCM1 1747 aa28.86■■■□□ 2.21
USP44-204ENST00000547951 KIF13BQ9NQT8 1826 aa28.85■■■□□ 2.21
USP44-204ENST00000547951 RFC4P35249 363 aa28.85■■■□□ 2.21
USP44-204ENST00000547951 UBR2Q8IWV8 1755 aa28.83■■■□□ 2.21
USP44-204ENST00000547951 GRIN3BO60391 1043 aa28.83■■■□□ 2.21
USP44-204ENST00000547951 PPP2R1AP30153 589 aa28.83■■■□□ 2.21
USP44-204ENST00000547951 NLGN1Q8N2Q7 840 aa28.83■■■□□ 2.21
USP44-204ENST00000547951 N4BP2Q86UW6 1770 aaPredicted RBP28.83■■■□□ 2.21
USP44-204ENST00000547951 PHACTR3Q96KR7 559 aa28.82■■■□□ 2.2
USP44-204ENST00000547951 SIPA1L3O60292 1781 aaPredicted RBP28.81■■■□□ 2.2
USP44-204ENST00000547951 IL17REQ8NFR9 667 aa28.81■■■□□ 2.2
USP44-204ENST00000547951 PXDNLA1KZ92 1463 aa28.8■■■□□ 2.2
USP44-204ENST00000547951 CYP19A1P11511 503 aaPredicted RBP28.8■■■□□ 2.2
USP44-204ENST00000547951 RSPH6AQ9H0K4 717 aa28.8■■■□□ 2.2
USP44-204ENST00000547951 C10orf71Q711Q0 1435 aa28.79■■■□□ 2.2
USP44-204ENST00000547951 CCDC87Q9NVE4 849 aa28.79■■■□□ 2.2
USP44-204ENST00000547951 USP42Q9H9J4 1324 aaKnown RBP28.78■■■□□ 2.2
USP44-204ENST00000547951 PRKAR2BP31323 418 aa28.78■■■□□ 2.2
USP44-204ENST00000547951 FKBP8Q14318 412 aa28.78■■■□□ 2.2
USP44-204ENST00000547951 CFAP53Q96M91 514 aa28.78■■■□□ 2.2
USP44-204ENST00000547951 GNAT3A8MTJ3 354 aa28.77■■■□□ 2.2
USP44-204ENST00000547951 GAS2L2Q8NHY3 880 aa28.77■■■□□ 2.2
USP44-204ENST00000547951 SOS1Q07889 1333 aaPredicted RBP28.76■■■□□ 2.19
USP44-204ENST00000547951 DDR1Q08345 913 aa28.75■■■□□ 2.19
USP44-204ENST00000547951 ZBTB1Q9Y2K1 713 aa28.75■■■□□ 2.19
USP44-204ENST00000547951 A0A0G2JLW4 131 aa28.74■■■□□ 2.19
USP44-204ENST00000547951 PARP3Q9Y6F1 533 aa28.73■■■□□ 2.19
USP44-204ENST00000547951 U2AF1L5P0DN76 240 aaPredicted RBP28.72■■■□□ 2.19
USP44-204ENST00000547951 U2AF1Q01081 240 aaKnown RBP eCLIP28.72■■■□□ 2.19
USP44-204ENST00000547951 TEFQ10587 303 aa28.72■■■□□ 2.19
USP44-204ENST00000547951 ZNF496Q96IT1 587 aaPredicted RBP28.72■■■□□ 2.19
USP44-204ENST00000547951 USPL1Q5W0Q7 1092 aa28.71■■■□□ 2.19
USP44-204ENST00000547951 BRCA1P38398 1863 aaKnown RBP28.7■■■□□ 2.19
USP44-204ENST00000547951 DPEP1P16444 411 aa28.7■■■□□ 2.18
USP44-204ENST00000547951 CEMIPQ8WUJ3 1361 aa28.7■■■□□ 2.18
USP44-204ENST00000547951 KCNQ3O43525 872 aa28.69■■■□□ 2.18
USP44-204ENST00000547951 ZNF790Q6PG37 636 aa28.69■■■□□ 2.18
USP44-204ENST00000547951 TTC5Q8N0Z6 440 aa28.69■■■□□ 2.18
USP44-204ENST00000547951 VSIG10Q8N0Z9 540 aa28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms