RNA–Protein interactions for RNA: ENST00000547905.5

RACGAP1-209, Transcript of Rac GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RACGAP1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACGAP1-209ENST00000547905 PCDH11XQ9BZA7 1347 aa13.15□□□□□ -0.3
RACGAP1-209ENST00000547905 PCDH11YQ9BZA8 1340 aa13.15□□□□□ -0.3
RACGAP1-209ENST00000547905 PARP3Q9Y6F1 533 aa13.15□□□□□ -0.3
RACGAP1-209ENST00000547905 VIRMAQ69YN4 1812 aaKnown RBP13.15□□□□□ -0.3
RACGAP1-209ENST00000547905 UTRNP46939 3433 aa13.15□□□□□ -0.3
RACGAP1-209ENST00000547905 SOX12O15370 315 aa13.14□□□□□ -0.31
RACGAP1-209ENST00000547905 LBX1P52954 281 aa13.14□□□□□ -0.31
RACGAP1-209ENST00000547905 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
RACGAP1-209ENST00000547905 ZNF831Q5JPB2 1677 aa13.14□□□□□ -0.31
RACGAP1-209ENST00000547905 RC3H1Q5TC82 1133 aaKnown RBP13.14□□□□□ -0.31
RACGAP1-209ENST00000547905 RTL1A6NKG5 1358 aa13.13□□□□□ -0.31
RACGAP1-209ENST00000547905 PHF14O94880 888 aa13.13□□□□□ -0.31
RACGAP1-209ENST00000547905 TRAPPC3LQ5T215 181 aa13.13□□□□□ -0.31
RACGAP1-209ENST00000547905 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
RACGAP1-209ENST00000547905 PASKQ96RG2 1323 aa13.12□□□□□ -0.31
RACGAP1-209ENST00000547905 MAP2P11137 1827 aaKnown RBP13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 CCDC85CA6NKD9 419 aa13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 MEGF6O75095 1541 aa13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 LOC102724428A0A0B4J2F2 783 aa13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 SIK1P57059 783 aa13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 NKX1-1Q15270 411 aaPredicted RBP13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 RAPGEF4Q8WZA2 1011 aa13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 EDC4Q6P2E9 1401 aaKnown RBP13.11□□□□□ -0.31
RACGAP1-209ENST00000547905 TATP17735 454 aaPredicted RBP13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 RTCBQ9Y3I0 505 aaKnown RBP13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 RASSF10A6NK89 507 aa13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 TMEM88BA6NKF7 163 aa13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 GNPATO15228 680 aa13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 AMIGO3Q86WK7 504 aa13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 LINC00116Q8NCU8 138 aa13.1□□□□□ -0.31
RACGAP1-209ENST00000547905 VEGFBP49765 207 aa13.09□□□□□ -0.31
RACGAP1-209ENST00000547905 PRPF38BQ5VTL8 546 aaKnown RBP13.09□□□□□ -0.31
RACGAP1-209ENST00000547905 SBNO2Q9Y2G9 1366 aa13.09□□□□□ -0.31
RACGAP1-209ENST00000547905 GCC1Q96CN9 775 aa13.08□□□□□ -0.31
RACGAP1-209ENST00000547905 THSD7BQ9C0I4 1608 aa13.08□□□□□ -0.32
RACGAP1-209ENST00000547905 CA12O43570 354 aa13.08□□□□□ -0.32
RACGAP1-209ENST00000547905 LDHDQ86WU2 507 aa13.08□□□□□ -0.32
RACGAP1-209ENST00000547905 PUS7Q96PZ0 661 aaKnown RBP13.08□□□□□ -0.32
RACGAP1-209ENST00000547905 POTECB2RU33 542 aa13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 IQCA1LA6NCM1 817 aa13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 MPRIPQ6WCQ1 1025 aa13.07□□□□□ -0.32
RACGAP1-209ENST00000547905 GYS1P13807 737 aa13.06□□□□□ -0.32
RACGAP1-209ENST00000547905 HOXC9P31274 260 aa13.06□□□□□ -0.32
RACGAP1-209ENST00000547905 KIF24Q5T7B8 1368 aa13.06□□□□□ -0.32
RACGAP1-209ENST00000547905 TIAM2Q8IVF5 1701 aa13.05□□□□□ -0.32
RACGAP1-209ENST00000547905 RPS6KA4O75676 772 aa13.05□□□□□ -0.32
RACGAP1-209ENST00000547905 BEGAINQ9BUH8 593 aa13.05□□□□□ -0.32
RACGAP1-209ENST00000547905 ITGB4P16144 1822 aa13.05□□□□□ -0.32
RACGAP1-209ENST00000547905 NME9Q86XW9 330 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 PIGBQ92521 554 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 RFC4P35249 363 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 ECE1P42892 770 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 DEFB115Q30KQ5 88 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 NBPF1Q3BBV0 1214 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
RACGAP1-209ENST00000547905 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.03□□□□□ -0.329e-7■■□□□ 14.2
RACGAP1-209ENST00000547905 ATP6V1AP38606 617 aa13.03□□□□□ -0.32
RACGAP1-209ENST00000547905 AMPHP49418 695 aa13.03□□□□□ -0.32
RACGAP1-209ENST00000547905 TERF2IPQ9NYB0 399 aa13.03□□□□□ -0.32
RACGAP1-209ENST00000547905 WDR33Q9C0J8 1336 aaKnown RBP13.02□□□□□ -0.32
RACGAP1-209ENST00000547905 ITPK1Q13572 414 aa13.02□□□□□ -0.33
RACGAP1-209ENST00000547905 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.02□□□□□ -0.33
RACGAP1-209ENST00000547905 ARHGEF1Q92888 912 aaKnown RBP13.02□□□□□ -0.33
RACGAP1-209ENST00000547905 L3MBTL3Q96JM7 780 aaPredicted RBP13.02□□□□□ -0.33
RACGAP1-209ENST00000547905 KDRP35968 1356 aa13.02□□□□□ -0.33
RACGAP1-209ENST00000547905 NEUROD1Q13562 356 aa13.01□□□□□ -0.33
RACGAP1-209ENST00000547905 LTV1Q96GA3 475 aaPredicted RBP13.01□□□□□ -0.33
RACGAP1-209ENST00000547905 SCN4AP35499 1836 aa13.01□□□□□ -0.33
RACGAP1-209ENST00000547905 DICER1Q9UPY3 1922 aaKnown RBP13□□□□□ -0.33
RACGAP1-209ENST00000547905 DLEC1Q9Y238 1755 aa13□□□□□ -0.33
RACGAP1-209ENST00000547905 TTLL6Q8N841 843 aa13□□□□□ -0.33
RACGAP1-209ENST00000547905 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
RACGAP1-209ENST00000547905 SPG7Q9UQ90 795 aa13□□□□□ -0.33
RACGAP1-209ENST00000547905 ITGBL1O95965 494 aaPredicted RBP13□□□□□ -0.33
RACGAP1-209ENST00000547905 MAP2K2P36507 400 aa13□□□□□ -0.33
RACGAP1-209ENST00000547905 CYP27B1O15528 508 aa12.99□□□□□ -0.33
RACGAP1-209ENST00000547905 RASSF7Q02833 373 aa12.99□□□□□ -0.33
RACGAP1-209ENST00000547905 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
RACGAP1-209ENST00000547905 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
RACGAP1-209ENST00000547905 COG3Q96JB2 828 aa12.98□□□□□ -0.33
RACGAP1-209ENST00000547905 NCAPD2Q15021 1401 aa12.98□□□□□ -0.33
RACGAP1-209ENST00000547905 CENPBP07199 599 aaPredicted RBP12.98□□□□□ -0.33
RACGAP1-209ENST00000547905 MCOLN1Q9GZU1 580 aa12.98□□□□□ -0.33
RACGAP1-209ENST00000547905 TM4SF1P30408 202 aa12.97□□□□□ -0.33
RACGAP1-209ENST00000547905 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
RACGAP1-209ENST00000547905 INSRP06213 1382 aa12.97□□□□□ -0.33
RACGAP1-209ENST00000547905 SOGA3Q5TF21 947 aa12.97□□□□□ -0.33
RACGAP1-209ENST00000547905 PNMA8AQ86V59 439 aaPredicted RBP12.97□□□□□ -0.33
RACGAP1-209ENST00000547905 COL5A3P25940 1745 aaPredicted RBP12.96□□□□□ -0.33
RACGAP1-209ENST00000547905 USP42Q9H9J4 1324 aaKnown RBP12.96□□□□□ -0.33
RACGAP1-209ENST00000547905 RAB3GAP2Q9H2M9 1393 aa12.96□□□□□ -0.33
RACGAP1-209ENST00000547905 RGPD2P0DJD1 1756 aa12.96□□□□□ -0.34
RACGAP1-209ENST00000547905 POLRMTO00411 1230 aaKnown RBP12.96□□□□□ -0.34
RACGAP1-209ENST00000547905 CHRNA5P30532 468 aa12.96□□□□□ -0.34
RACGAP1-209ENST00000547905 TAF1DQ9H5J8 278 aaPredicted RBP12.96□□□□□ -0.34
RACGAP1-209ENST00000547905 NRXN2Q9P2S2 1712 aa12.95□□□□□ -0.34
RACGAP1-209ENST00000547905 NFKBIEO00221 500 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms