RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 NOM1Q5C9Z4 860 aaKnown RBP11.73□□□□□ -0.53
HIF1A-205ENST00000547430 CAPN12Q6ZSI9 719 aa11.73□□□□□ -0.53
HIF1A-205ENST00000547430 TNS4Q8IZW8 715 aa11.73□□□□□ -0.53
HIF1A-205ENST00000547430 DNMT3AQ9Y6K1 912 aaPredicted RBP11.73□□□□□ -0.53
HIF1A-205ENST00000547430 C21orf2O43822 256 aa11.72□□□□□ -0.53
HIF1A-205ENST00000547430 SLC19A1P41440 591 aa11.72□□□□□ -0.53
HIF1A-205ENST00000547430 MARSP56192 900 aaKnown RBP11.72□□□□□ -0.53
HIF1A-205ENST00000547430 GAS2L2Q8NHY3 880 aa11.72□□□□□ -0.53
HIF1A-205ENST00000547430 ADD1P35611 737 aaKnown RBP11.71□□□□□ -0.53
HIF1A-205ENST00000547430 ECM1Q16610 540 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 SCG3Q8WXD2 468 aaKnown RBP11.71□□□□□ -0.53
HIF1A-205ENST00000547430 ANO2Q9NQ90 1003 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 SERTAD1Q9UHV2 236 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 EMILIN1Q9Y6C2 1016 aa11.71□□□□□ -0.53
HIF1A-205ENST00000547430 ATAD2Q6PL18 1390 aa11.7□□□□□ -0.54
HIF1A-205ENST00000547430 SF3B2Q13435 895 aaKnown RBP11.7□□□□□ -0.54
HIF1A-205ENST00000547430 ESCO1Q5FWF5 840 aa11.7□□□□□ -0.54
HIF1A-205ENST00000547430 TSPAN10Q9H1Z9 355 aaPredicted RBP11.7□□□□□ -0.54
HIF1A-205ENST00000547430 FOXK2Q01167 660 aa11.69□□□□□ -0.54
HIF1A-205ENST00000547430 MTFR1Q15390 333 aa11.69□□□□□ -0.54
HIF1A-205ENST00000547430 RBM47A0AV96 593 aaKnown RBP11.68□□□□□ -0.54
HIF1A-205ENST00000547430 FKBP4Q02790 459 aaKnown RBP eCLIP11.68□□□□□ -0.54
HIF1A-205ENST00000547430 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
HIF1A-205ENST00000547430 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
HIF1A-205ENST00000547430 SCHIP1Q9P0W5 487 aaPredicted RBP11.67□□□□□ -0.54
HIF1A-205ENST00000547430 A6NJY4 79 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 E9PSI1 815 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 SMTNP53814 917 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 STAG2Q8N3U4 1231 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 XAGE2Q96GT9 111 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 ARHGEF10LQ9HCE6 1279 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 RAB6BQ9NRW1 208 aa11.66□□□□□ -0.54
HIF1A-205ENST00000547430 IL2RAP01589 272 aa11.65□□□□□ -0.54
HIF1A-205ENST00000547430 NPR3P17342 541 aa11.65□□□□□ -0.54
HIF1A-205ENST00000547430 ARHGAP4P98171 946 aa11.65□□□□□ -0.54
HIF1A-205ENST00000547430 NAA30Q147X3 362 aaPredicted RBP11.65□□□□□ -0.54
HIF1A-205ENST00000547430 SLC9A9Q8IVB4 645 aa11.65□□□□□ -0.54
HIF1A-205ENST00000547430 A0A1W2PRU2 124 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 ADH1AP07327 375 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 NNTQ13423 1086 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 ZNF697Q5TEC3 545 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 ZNF598Q86UK7 904 aaKnown RBP11.64□□□□□ -0.55
HIF1A-205ENST00000547430 NPAS4Q8IUM7 802 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 C2orf49Q9BVC5 232 aaPredicted RBP11.64□□□□□ -0.55
HIF1A-205ENST00000547430 HRH3Q9Y5N1 445 aa11.64□□□□□ -0.55
HIF1A-205ENST00000547430 PPP1R12BO60237 982 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-205ENST00000547430 ALDH1A1P00352 501 aa11.63□□□□□ -0.55
HIF1A-205ENST00000547430 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
HIF1A-205ENST00000547430 PKD2L1Q9P0L9 805 aa11.63□□□□□ -0.55
HIF1A-205ENST00000547430 ANKRD33BA6NCL7 494 aa11.62□□□□□ -0.55
HIF1A-205ENST00000547430 POTEAQ6S8J7 498 aa11.62□□□□□ -0.55
HIF1A-205ENST00000547430 CHMP7Q8WUX9 453 aaPredicted RBP11.62□□□□□ -0.55
HIF1A-205ENST00000547430 VTI1AQ96AJ9 217 aa11.62□□□□□ -0.55
HIF1A-205ENST00000547430 DCTN4Q9UJW0 460 aa11.62□□□□□ -0.55
HIF1A-205ENST00000547430 UNCXA6NJT0 531 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 MAPK1P28482 360 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 PSMA6P60900 246 aaKnown RBP11.61□□□□□ -0.55
HIF1A-205ENST00000547430 TBCELQ5QJ74 424 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 Q6ZVU0 165 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 ESYT1Q9BSJ8 1104 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.61□□□□□ -0.55
HIF1A-205ENST00000547430 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
HIF1A-205ENST00000547430 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
HIF1A-205ENST00000547430 CDK2AP1O14519 115 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 TLR1Q15399 786 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 C16orf46Q6P387 395 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 ASB16Q96NS5 453 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 KLF16Q9BXK1 252 aaPredicted RBP11.6□□□□□ -0.55
HIF1A-205ENST00000547430 SAP130Q9H0E3 1048 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 USP3Q9Y6I4 520 aa11.6□□□□□ -0.55
HIF1A-205ENST00000547430 FAM13AO94988 1023 aa11.59□□□□□ -0.55
HIF1A-205ENST00000547430 CBLBQ13191 982 aa11.59□□□□□ -0.55
HIF1A-205ENST00000547430 CLN3Q13286 438 aa11.59□□□□□ -0.55
HIF1A-205ENST00000547430 SNIP1Q8TAD8 396 aaKnown RBP11.59□□□□□ -0.55
HIF1A-205ENST00000547430 MMRN1Q13201 1228 aa11.58□□□□□ -0.56
HIF1A-205ENST00000547430 BCL2L13Q9BXK5 485 aa11.58□□□□□ -0.56
HIF1A-205ENST00000547430 FHDC1Q9C0D6 1143 aaPredicted RBP11.58□□□□□ -0.56
HIF1A-205ENST00000547430 A0A0G2JS52 829 aa11.57□□□□□ -0.56
HIF1A-205ENST00000547430 ZNF16P17020 682 aaPredicted RBP11.57□□□□□ -0.56
HIF1A-205ENST00000547430 MPSTP25325 297 aa11.57□□□□□ -0.56
HIF1A-205ENST00000547430 FOXC1Q12948 553 aa11.57□□□□□ -0.56
HIF1A-205ENST00000547430 NBPF15Q8N660 670 aa11.57□□□□□ -0.56
HIF1A-205ENST00000547430 ITPKCQ96DU7 683 aa11.57□□□□□ -0.56
HIF1A-205ENST00000547430 PTGIRP43119 386 aa11.56□□□□□ -0.56
HIF1A-205ENST00000547430 COX20Q5RI15 118 aa11.56□□□□□ -0.56
HIF1A-205ENST00000547430 ZNF295-AS1Q8N0V1 137 aa11.56□□□□□ -0.56
HIF1A-205ENST00000547430 MYO19Q96H55 970 aa11.56□□□□□ -0.56
HIF1A-205ENST00000547430 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
HIF1A-205ENST00000547430 V9GY48 417 aaPredicted RBP11.56□□□□□ -0.56
HIF1A-205ENST00000547430 TNFRSF10BO14763 440 aa11.55□□□□□ -0.56
HIF1A-205ENST00000547430 ZIC2O95409 532 aaPredicted RBP11.55□□□□□ -0.56
HIF1A-205ENST00000547430 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
HIF1A-205ENST00000547430 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
HIF1A-205ENST00000547430 RGL4Q8IZJ4 473 aa11.55□□□□□ -0.56
HIF1A-205ENST00000547430 CHMP3Q9Y3E7 222 aa11.55□□□□□ -0.56
HIF1A-205ENST00000547430 TEAD4Q15561 434 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms