RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 LINC00116Q8NCU8 138 aa21.95■■□□□ 1.1
CDK4-204ENST00000547281 RBM42Q9BTD8 480 aaKnown RBP21.95■■□□□ 1.1
CDK4-204ENST00000547281 SMIM5Q71RC9 77 aa21.94■■□□□ 1.1
CDK4-204ENST00000547281 ITPK1Q13572 414 aa21.93■■□□□ 1.1
CDK4-204ENST00000547281 TUBGCP6Q96RT7 1819 aa21.93■■□□□ 1.1
CDK4-204ENST00000547281 C5P01031 1676 aa21.92■■□□□ 1.1
CDK4-204ENST00000547281 GNPATO15228 680 aa21.92■■□□□ 1.1
CDK4-204ENST00000547281 NLGN2Q8NFZ4 835 aa21.92■■□□□ 1.1
CDK4-204ENST00000547281 SSFA2P28290 1259 aa21.91■■□□□ 1.1
CDK4-204ENST00000547281 AMIGO3Q86WK7 504 aa21.91■■□□□ 1.1
CDK4-204ENST00000547281 UTRNP46939 3433 aa21.9■■□□□ 1.1
CDK4-204ENST00000547281 C4BP0C0L5 1744 aa21.89■■□□□ 1.1
CDK4-204ENST00000547281 DIAPH1O60610 1272 aaKnown RBP21.89■■□□□ 1.09
CDK4-204ENST00000547281 HMOX1P09601 288 aa21.89■■□□□ 1.09
CDK4-204ENST00000547281 NFATC2IPQ8NCF5 419 aa21.89■■□□□ 1.09
CDK4-204ENST00000547281 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
CDK4-204ENST00000547281 PTCD1O75127 700 aaKnown RBP21.87■■□□□ 1.09
CDK4-204ENST00000547281 RTCBQ9Y3I0 505 aaKnown RBP21.87■■□□□ 1.09
CDK4-204ENST00000547281 KDRP35968 1356 aa21.87■■□□□ 1.09
CDK4-204ENST00000547281 AKAP4Q5JQC9 854 aa21.86■■□□□ 1.09
CDK4-204ENST00000547281 TRAPPC3LQ5T215 181 aa21.86■■□□□ 1.09
CDK4-204ENST00000547281 CD2APQ9Y5K6 639 aa21.86■■□□□ 1.09
CDK4-204ENST00000547281 KDM6AO15550 1401 aaPredicted RBP21.86■■□□□ 1.09
CDK4-204ENST00000547281 SLC4A9Q96Q91 983 aa21.85■■□□□ 1.09
CDK4-204ENST00000547281 COL24A1Q17RW2 1714 aa21.84■■□□□ 1.09
CDK4-204ENST00000547281 GRIN3BO60391 1043 aa21.83■■□□□ 1.09
CDK4-204ENST00000547281 RC3H1Q5TC82 1133 aaKnown RBP21.83■■□□□ 1.09
CDK4-204ENST00000547281 ZNF784Q8NCA9 323 aaPredicted RBP21.83■■□□□ 1.09
CDK4-204ENST00000547281 GOLGB1Q14789 3259 aaKnown RBP21.82■■□□□ 1.08
CDK4-204ENST00000547281 U2SURPO15042 1029 aaKnown RBP21.81■■□□□ 1.08
CDK4-204ENST00000547281 LGR6Q9HBX8 967 aa21.81■■□□□ 1.08
CDK4-204ENST00000547281 NPC1L1Q9UHC9 1359 aa21.8■■□□□ 1.08
CDK4-204ENST00000547281 YBX3P16989 372 aaKnown RBP eCLIP21.8■■□□□ 1.082e-7■□□□□ 9.7
CDK4-204ENST00000547281 RFC4P35249 363 aa21.8■■□□□ 1.08
CDK4-204ENST00000547281 RPS6KA4O75676 772 aa21.79■■□□□ 1.08
CDK4-204ENST00000547281 MTHFSDQ2M296 383 aaKnown RBP21.79■■□□□ 1.08
CDK4-204ENST00000547281 ARHGEF1Q92888 912 aaKnown RBP21.79■■□□□ 1.08
CDK4-204ENST00000547281 SLC52A2Q9HAB3 445 aa21.79■■□□□ 1.08
CDK4-204ENST00000547281 UBR3Q6ZT12 1888 aa21.79■■□□□ 1.08
CDK4-204ENST00000547281 CNTNAP4Q9C0A0 1308 aa21.79■■□□□ 1.08
CDK4-204ENST00000547281 RNMTO43148 476 aaKnown RBP21.78■■□□□ 1.08
CDK4-204ENST00000547281 MMP10P09238 476 aa21.78■■□□□ 1.08
CDK4-204ENST00000547281 ADRA2BP18089 450 aa21.78■■□□□ 1.08
CDK4-204ENST00000547281 NLGN1Q8N2Q7 840 aa21.78■■□□□ 1.08
CDK4-204ENST00000547281 CRKLP46109 303 aaKnown RBP21.76■■□□□ 1.07
CDK4-204ENST00000547281 CFAP53Q96M91 514 aa21.76■■□□□ 1.07
CDK4-204ENST00000547281 WWC3Q9ULE0 1092 aa21.75■■□□□ 1.07
CDK4-204ENST00000547281 SLC39A6Q13433 755 aa21.74■■□□□ 1.07
CDK4-204ENST00000547281 CHD4Q14839 1912 aa21.73■■□□□ 1.07
CDK4-204ENST00000547281 GYS1P13807 737 aa21.72■■□□□ 1.07
CDK4-204ENST00000547281 DNAJC10Q8IXB1 793 aa21.71■■□□□ 1.07
CDK4-204ENST00000547281 GAS2L2Q8NHY3 880 aa21.71■■□□□ 1.07
CDK4-204ENST00000547281 NUDCQ9Y266 331 aa21.71■■□□□ 1.07
CDK4-204ENST00000547281 PARP3Q9Y6F1 533 aa21.71■■□□□ 1.07
CDK4-204ENST00000547281 GNAT3A8MTJ3 354 aa21.69■■□□□ 1.06
CDK4-204ENST00000547281 INTS5Q6P9B9 1019 aaKnown RBP21.69■■□□□ 1.06
CDK4-204ENST00000547281 CCDC87Q9NVE4 849 aa21.69■■□□□ 1.06
CDK4-204ENST00000547281 ZNF831Q5JPB2 1677 aa21.69■■□□□ 1.06
CDK4-204ENST00000547281 TEFQ10587 303 aa21.68■■□□□ 1.06
CDK4-204ENST00000547281 TTC5Q8N0Z6 440 aa21.68■■□□□ 1.06
CDK4-204ENST00000547281 SRP68Q9UHB9 627 aaKnown RBP21.68■■□□□ 1.06
CDK4-204ENST00000547281 SCN11AQ9UI33 1791 aa21.67■■□□□ 1.06
CDK4-204ENST00000547281 ZPR1O75312 459 aa21.67■■□□□ 1.06
CDK4-204ENST00000547281 PPP2R1AP30153 589 aa21.67■■□□□ 1.06
CDK4-204ENST00000547281 CYP19A1P11511 503 aaPredicted RBP21.66■■□□□ 1.06
CDK4-204ENST00000547281 ZEB1P37275 1124 aaPredicted RBP21.66■■□□□ 1.06
CDK4-204ENST00000547281 TGFB2P61812 414 aa21.66■■□□□ 1.06
CDK4-204ENST00000547281 COL3A1P02461 1466 aaPredicted RBP21.65■■□□□ 1.06
CDK4-204ENST00000547281 A0A0G2JLW4 131 aa21.65■■□□□ 1.06
CDK4-204ENST00000547281 U2AF1L5P0DN76 240 aaPredicted RBP21.65■■□□□ 1.06
CDK4-204ENST00000547281 PRKAR2BP31323 418 aa21.65■■□□□ 1.06
CDK4-204ENST00000547281 U2AF1Q01081 240 aaKnown RBP eCLIP21.65■■□□□ 1.06
CDK4-204ENST00000547281 FKBP8Q14318 412 aa21.65■■□□□ 1.06
CDK4-204ENST00000547281 IL17REQ8NFR9 667 aa21.65■■□□□ 1.06
CDK4-204ENST00000547281 USP42Q9H9J4 1324 aaKnown RBP21.64■■□□□ 1.05
CDK4-204ENST00000547281 VSIG10Q8N0Z9 540 aa21.64■■□□□ 1.05
CDK4-204ENST00000547281 PHACTR3Q96KR7 559 aa21.64■■□□□ 1.05
CDK4-204ENST00000547281 COL5A3P25940 1745 aaPredicted RBP21.63■■□□□ 1.05
CDK4-204ENST00000547281 MYH14Q7Z406 1995 aaKnown RBP21.63■■□□□ 1.05
CDK4-204ENST00000547281 STARD3NLO95772 234 aa21.62■■□□□ 1.05
CDK4-204ENST00000547281 USPL1Q5W0Q7 1092 aa21.62■■□□□ 1.05
CDK4-204ENST00000547281 RSPH6AQ9H0K4 717 aa21.62■■□□□ 1.05
CDK4-204ENST00000547281 BCS1LQ9Y276 419 aa21.62■■□□□ 1.05
CDK4-204ENST00000547281 MRC1P22897 1456 aa21.61■■□□□ 1.05
CDK4-204ENST00000547281 GIGYF1O75420 1035 aaPredicted RBP21.61■■□□□ 1.05
CDK4-204ENST00000547281 DPEP1P16444 411 aa21.61■■□□□ 1.05
CDK4-204ENST00000547281 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
CDK4-204ENST00000547281 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
CDK4-204ENST00000547281 SOS1Q07889 1333 aaPredicted RBP21.6■■□□□ 1.05
CDK4-204ENST00000547281 C1QTNF8P60827 252 aa21.6■■□□□ 1.05
CDK4-204ENST00000547281 ZNF790Q6PG37 636 aa21.6■■□□□ 1.05
CDK4-204ENST00000547281 ZBTB1Q9Y2K1 713 aa21.6■■□□□ 1.05
CDK4-204ENST00000547281 FCHSD2O94868 740 aa21.59■■□□□ 1.05
CDK4-204ENST00000547281 RTF1Q92541 710 aaKnown RBP21.59■■□□□ 1.05
CDK4-204ENST00000547281 ZNF496Q96IT1 587 aaPredicted RBP21.59■■□□□ 1.05
CDK4-204ENST00000547281 TEX13AQ9BXU3 409 aaPredicted RBP21.59■■□□□ 1.05
CDK4-204ENST00000547281 NARFQ9UHQ1 456 aa21.59■■□□□ 1.05
CDK4-204ENST00000547281 TM4SF1P30408 202 aa21.58■■□□□ 1.05
CDK4-204ENST00000547281 DDR1Q08345 913 aa21.58■■□□□ 1.05
CDK4-204ENST00000547281 DDX10Q13206 875 aaKnown RBP21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms