RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 MIER1Q8N108 512 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 PIGBQ92521 554 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 TMOD3Q9NYL9 352 aa16.17■□□□□ 0.18
HDAC7-226ENST00000547259 LOC102724428A0A0B4J2F2 783 aa16.16■□□□□ 0.18
HDAC7-226ENST00000547259 SIK1P57059 783 aa16.16■□□□□ 0.18
HDAC7-226ENST00000547259 CFAP53Q96M91 514 aa16.16■□□□□ 0.18
HDAC7-226ENST00000547259 COL3A1P02461 1466 aaPredicted RBP16.16■□□□□ 0.18
HDAC7-226ENST00000547259 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
HDAC7-226ENST00000547259 UBR3Q6ZT12 1888 aa16.15■□□□□ 0.18
HDAC7-226ENST00000547259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.14■□□□□ 0.17
HDAC7-226ENST00000547259 HSP90AB1P08238 724 aaKnown RBP16.14■□□□□ 0.17
HDAC7-226ENST00000547259 EYA1Q99502 592 aa16.14■□□□□ 0.17
HDAC7-226ENST00000547259 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
HDAC7-226ENST00000547259 PHKG2P15735 406 aa16.12■□□□□ 0.17
HDAC7-226ENST00000547259 ATP6V1AP38606 617 aa16.12■□□□□ 0.17
HDAC7-226ENST00000547259 ERVV-2B6SEH9 535 aa16.11■□□□□ 0.17
HDAC7-226ENST00000547259 PHF14O94880 888 aa16.11■□□□□ 0.17
HDAC7-226ENST00000547259 GPBP1L1Q9HC44 474 aaPredicted RBP16.11■□□□□ 0.17
HDAC7-226ENST00000547259 MRS2Q9HD23 443 aa16.11■□□□□ 0.17
HDAC7-226ENST00000547259 CCER2I3L3R5 266 aa16.1■□□□□ 0.17
HDAC7-226ENST00000547259 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
HDAC7-226ENST00000547259 GNPATO15228 680 aa16.09■□□□□ 0.17
HDAC7-226ENST00000547259 DIAPH1O60610 1272 aaKnown RBP16.09■□□□□ 0.17
HDAC7-226ENST00000547259 CCDC184Q52MB2 194 aa16.09■□□□□ 0.17
HDAC7-226ENST00000547259 NLGN1Q8N2Q7 840 aa16.09■□□□□ 0.17
HDAC7-226ENST00000547259 ASAP1Q9ULH1 1129 aa16.09■□□□□ 0.17
HDAC7-226ENST00000547259 ADRA2BP18089 450 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 PLEKHO1Q53GL0 409 aaPredicted RBP16.08■□□□□ 0.16
HDAC7-226ENST00000547259 TRAPPC3LQ5T215 181 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 LINC00116Q8NCU8 138 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 DCAF5Q96JK2 942 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 RTCBQ9Y3I0 505 aaKnown RBP16.08■□□□□ 0.16
HDAC7-226ENST00000547259 IGSF1Q8N6C5 1336 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
HDAC7-226ENST00000547259 EIF4A2Q14240 407 aaKnown RBP16.07■□□□□ 0.16
HDAC7-226ENST00000547259 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
HDAC7-226ENST00000547259 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
HDAC7-226ENST00000547259 ZNF831Q5JPB2 1677 aa16.07■□□□□ 0.16
HDAC7-226ENST00000547259 TGFB2P61812 414 aa16.06■□□□□ 0.16
HDAC7-226ENST00000547259 NUDCQ9Y266 331 aa16.06■□□□□ 0.16
HDAC7-226ENST00000547259 U2SURPO15042 1029 aaKnown RBP16.05■□□□□ 0.16
HDAC7-226ENST00000547259 IL13P35225 146 aa16.05■□□□□ 0.16
HDAC7-226ENST00000547259 ITPK1Q13572 414 aa16.05■□□□□ 0.16
HDAC7-226ENST00000547259 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
HDAC7-226ENST00000547259 AMIGO3Q86WK7 504 aa16.04■□□□□ 0.16
HDAC7-226ENST00000547259 ADCY9O60503 1353 aa16.03■□□□□ 0.16
HDAC7-226ENST00000547259 MMP10P09238 476 aa16.03■□□□□ 0.16
HDAC7-226ENST00000547259 CABP4P57796 275 aa16.03■□□□□ 0.16
HDAC7-226ENST00000547259 C1orf141Q5JVX7 400 aa16.03■□□□□ 0.16
HDAC7-226ENST00000547259 RBM42Q9BTD8 480 aaKnown RBP16.03■□□□□ 0.16
HDAC7-226ENST00000547259 CCDC87Q9NVE4 849 aa16.03■□□□□ 0.16
HDAC7-226ENST00000547259 CNTNAP4Q9C0A0 1308 aa16.02■□□□□ 0.16
HDAC7-226ENST00000547259 RFC4P35249 363 aa16.02■□□□□ 0.16
HDAC7-226ENST00000547259 KIF13BQ9NQT8 1826 aa16.02■□□□□ 0.16
HDAC7-226ENST00000547259 RPS6KA4O75676 772 aa16.01■□□□□ 0.15
HDAC7-226ENST00000547259 U2AF1L5P0DN76 240 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-226ENST00000547259 U2AF1Q01081 240 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC7-226ENST00000547259 ZNF530Q6P9A1 599 aaPredicted RBP16.01■□□□□ 0.15
HDAC7-226ENST00000547259 PARP3Q9Y6F1 533 aa16.01■□□□□ 0.15
HDAC7-226ENST00000547259 KDRP35968 1356 aa16■□□□□ 0.15
HDAC7-226ENST00000547259 HSPA6P17066 643 aa16■□□□□ 0.15
HDAC7-226ENST00000547259 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
HDAC7-226ENST00000547259 FAM9BQ8IZU0 186 aa15.99■□□□□ 0.15
HDAC7-226ENST00000547259 PNISRQ8TF01 805 aaKnown RBP15.99■□□□□ 0.15
HDAC7-226ENST00000547259 ARHGEF1Q92888 912 aaKnown RBP15.99■□□□□ 0.15
HDAC7-226ENST00000547259 HMOX1P09601 288 aa15.98■□□□□ 0.15
HDAC7-226ENST00000547259 COL5A3P25940 1745 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-226ENST00000547259 ZNF526Q8TF50 670 aaPredicted RBP15.98■□□□□ 0.15
HDAC7-226ENST00000547259 GYS1P13807 737 aa15.97■□□□□ 0.15
HDAC7-226ENST00000547259 SULT6B1Q6IMI4 303 aa15.97■□□□□ 0.15
HDAC7-226ENST00000547259 BCS1LQ9Y276 419 aa15.97■□□□□ 0.15
HDAC7-226ENST00000547259 CICQ96RK0 1608 aaPredicted RBP15.97■□□□□ 0.15
HDAC7-226ENST00000547259 AEBP1Q8IUX7 1158 aa15.96■□□□□ 0.15
HDAC7-226ENST00000547259 SLC4A9Q96Q91 983 aa15.96■□□□□ 0.15
HDAC7-226ENST00000547259 ADAMTS8Q9UP79 889 aa15.96■□□□□ 0.15
HDAC7-226ENST00000547259 MYH14Q7Z406 1995 aaKnown RBP15.96■□□□□ 0.15
HDAC7-226ENST00000547259 PXDNLA1KZ92 1463 aa15.96■□□□□ 0.14
HDAC7-226ENST00000547259 N4BP2Q86UW6 1770 aaPredicted RBP15.95■□□□□ 0.14
HDAC7-226ENST00000547259 C10orf71Q711Q0 1435 aa15.95■□□□□ 0.14
HDAC7-226ENST00000547259 C4AP0C0L4 1744 aa15.95■□□□□ 0.14
HDAC7-226ENST00000547259 NFATC2IPQ8NCF5 419 aa15.95■□□□□ 0.14
HDAC7-226ENST00000547259 WWC3Q9ULE0 1092 aa15.95■□□□□ 0.14
HDAC7-226ENST00000547259 A0A0G2JLW4 131 aa15.94■□□□□ 0.14
HDAC7-226ENST00000547259 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
HDAC7-226ENST00000547259 FCHSD2O94868 740 aa15.94■□□□□ 0.14
HDAC7-226ENST00000547259 ARHGAP27Q6ZUM4 889 aa15.94■□□□□ 0.14
HDAC7-226ENST00000547259 RSPH6AQ9H0K4 717 aa15.94■□□□□ 0.14
HDAC7-226ENST00000547259 PIM2Q9P1W9 311 aa15.94■□□□□ 0.14
HDAC7-226ENST00000547259 KDM6AO15550 1401 aaPredicted RBP15.94■□□□□ 0.14
HDAC7-226ENST00000547259 TOMM70O94826 608 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 PRKAR2BP31323 418 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 CRKLP46109 303 aaKnown RBP15.93■□□□□ 0.14
HDAC7-226ENST00000547259 AKAP4Q5JQC9 854 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
HDAC7-226ENST00000547259 DLG5Q8TDM6 1919 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 MAPK8IP3Q9UPT6 1336 aa15.93■□□□□ 0.14
HDAC7-226ENST00000547259 SCN11AQ9UI33 1791 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms