RNA–Protein interactions for RNA: ENST00000547102.5

LINC00661-202, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 619 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-202ENST00000547102 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
LINC00661-202ENST00000547102 CFAP53Q96M91 514 aa14.42□□□□□ -0.1
LINC00661-202ENST00000547102 SYT17Q9BSW7 474 aa14.42□□□□□ -0.1
LINC00661-202ENST00000547102 ATG3Q9NT62 314 aa14.42□□□□□ -0.1
LINC00661-202ENST00000547102 MAP3K5Q99683 1374 aa14.42□□□□□ -0.1
LINC00661-202ENST00000547102 PHF14O94880 888 aa14.41□□□□□ -0.1
LINC00661-202ENST00000547102 AKAP4Q5JQC9 854 aa14.41□□□□□ -0.1
LINC00661-202ENST00000547102 RBM42Q9BTD8 480 aaKnown RBP14.41□□□□□ -0.1
LINC00661-202ENST00000547102 COL3A1P02461 1466 aaPredicted RBP14.41□□□□□ -0.1
LINC00661-202ENST00000547102 UBR3Q6ZT12 1888 aa14.41□□□□□ -0.1
LINC00661-202ENST00000547102 SCN11AQ9UI33 1791 aa14.4□□□□□ -0.1
LINC00661-202ENST00000547102 U2SURPO15042 1029 aaKnown RBP14.4□□□□□ -0.1
LINC00661-202ENST00000547102 GNPATO15228 680 aa14.4□□□□□ -0.1
LINC00661-202ENST00000547102 LINC00116Q8NCU8 138 aa14.4□□□□□ -0.1
LINC00661-202ENST00000547102 ZNF831Q5JPB2 1677 aa14.39□□□□□ -0.11
LINC00661-202ENST00000547102 SSFA2P28290 1259 aa14.39□□□□□ -0.11
LINC00661-202ENST00000547102 MSL1Q68DK7 614 aa14.39□□□□□ -0.11
LINC00661-202ENST00000547102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.38□□□□□ -0.11
LINC00661-202ENST00000547102 ITPK1Q13572 414 aa14.38□□□□□ -0.11
LINC00661-202ENST00000547102 NFATC2IPQ8NCF5 419 aa14.37□□□□□ -0.11
LINC00661-202ENST00000547102 COL5A3P25940 1745 aaPredicted RBP14.36□□□□□ -0.11
LINC00661-202ENST00000547102 YY1P25490 414 aa14.36□□□□□ -0.11
LINC00661-202ENST00000547102 NUDCQ9Y266 331 aa14.36□□□□□ -0.11
LINC00661-202ENST00000547102 MRC1P22897 1456 aa14.36□□□□□ -0.11
LINC00661-202ENST00000547102 VIRMAQ69YN4 1812 aaKnown RBP14.36□□□□□ -0.11
LINC00661-202ENST00000547102 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
LINC00661-202ENST00000547102 MTHFSDQ2M296 383 aaKnown RBP14.35□□□□□ -0.11
LINC00661-202ENST00000547102 SLC52A2Q9HAB3 445 aa14.35□□□□□ -0.11
LINC00661-202ENST00000547102 RTCBQ9Y3I0 505 aaKnown RBP14.35□□□□□ -0.11
LINC00661-202ENST00000547102 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
LINC00661-202ENST00000547102 RNMTO43148 476 aaKnown RBP14.34□□□□□ -0.11
LINC00661-202ENST00000547102 PPP2R1AP30153 589 aa14.34□□□□□ -0.11
LINC00661-202ENST00000547102 AMIGO3Q86WK7 504 aa14.34□□□□□ -0.11
LINC00661-202ENST00000547102 GAS2L2Q8NHY3 880 aa14.34□□□□□ -0.11
LINC00661-202ENST00000547102 ADRA2BP18089 450 aa14.33□□□□□ -0.12
LINC00661-202ENST00000547102 GPR162Q16538 588 aa14.33□□□□□ -0.12
LINC00661-202ENST00000547102 RC3H1Q5TC82 1133 aaKnown RBP14.33□□□□□ -0.12
LINC00661-202ENST00000547102 PELP1Q8IZL8 1130 aaKnown RBP14.33□□□□□ -0.12
LINC00661-202ENST00000547102 SLC4A9Q96Q91 983 aa14.33□□□□□ -0.12
LINC00661-202ENST00000547102 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.12
LINC00661-202ENST00000547102 ADAMTS7Q9UKP4 1686 aa14.33□□□□□ -0.12
LINC00661-202ENST00000547102 TRAPPC3LQ5T215 181 aa14.32□□□□□ -0.12
LINC00661-202ENST00000547102 SMIM5Q71RC9 77 aa14.32□□□□□ -0.12
LINC00661-202ENST00000547102 LGR6Q9HBX8 967 aa14.32□□□□□ -0.12
LINC00661-202ENST00000547102 TJP1Q07157 1748 aa14.32□□□□□ -0.12
LINC00661-202ENST00000547102 U2AF1L5P0DN76 240 aaPredicted RBP14.31□□□□□ -0.12
LINC00661-202ENST00000547102 PRKAR2BP31323 418 aa14.31□□□□□ -0.12
LINC00661-202ENST00000547102 U2AF1Q01081 240 aaKnown RBP eCLIP14.31□□□□□ -0.12
LINC00661-202ENST00000547102 NLGN2Q8NFZ4 835 aa14.31□□□□□ -0.12
LINC00661-202ENST00000547102 GNAT3A8MTJ3 354 aa14.3□□□□□ -0.12
LINC00661-202ENST00000547102 RFC4P35249 363 aa14.3□□□□□ -0.12
LINC00661-202ENST00000547102 TEFQ10587 303 aa14.3□□□□□ -0.12
LINC00661-202ENST00000547102 TTC5Q8N0Z6 440 aa14.3□□□□□ -0.12
LINC00661-202ENST00000547102 CD2APQ9Y5K6 639 aa14.3□□□□□ -0.12
LINC00661-202ENST00000547102 RPS6KA4O75676 772 aa14.29□□□□□ -0.12
LINC00661-202ENST00000547102 CRKLP46109 303 aaKnown RBP14.29□□□□□ -0.12
LINC00661-202ENST00000547102 RSPH6AQ9H0K4 717 aa14.29□□□□□ -0.12
LINC00661-202ENST00000547102 CHD4Q14839 1912 aa14.29□□□□□ -0.12
LINC00661-202ENST00000547102 C4AP0C0L4 1744 aa14.28□□□□□ -0.12
LINC00661-202ENST00000547102 SLC39A6Q13433 755 aa14.28□□□□□ -0.12
LINC00661-202ENST00000547102 KCPQ6ZWJ8 1503 aa14.28□□□□□ -0.12
LINC00661-202ENST00000547102 MYH14Q7Z406 1995 aaKnown RBP14.28□□□□□ -0.12
LINC00661-202ENST00000547102 NLGN1Q8N2Q7 840 aa14.28□□□□□ -0.12
LINC00661-202ENST00000547102 NEFMP07197 916 aa14.27□□□□□ -0.13
LINC00661-202ENST00000547102 MMP10P09238 476 aa14.27□□□□□ -0.13
LINC00661-202ENST00000547102 DNAJC10Q8IXB1 793 aa14.27□□□□□ -0.13
LINC00661-202ENST00000547102 ARHGEF1Q92888 912 aaKnown RBP14.27□□□□□ -0.13
LINC00661-202ENST00000547102 FCHSD2O94868 740 aa14.26□□□□□ -0.13
LINC00661-202ENST00000547102 CCDC87Q9NVE4 849 aa14.26□□□□□ -0.13
LINC00661-202ENST00000547102 UBR2Q8IWV8 1755 aa14.26□□□□□ -0.13
LINC00661-202ENST00000547102 SIPA1L3O60292 1781 aaPredicted RBP14.25□□□□□ -0.13
LINC00661-202ENST00000547102 GRIN3BO60391 1043 aa14.25□□□□□ -0.13
LINC00661-202ENST00000547102 VSIG10Q8N0Z9 540 aa14.25□□□□□ -0.13
LINC00661-202ENST00000547102 RTF1Q92541 710 aaKnown RBP14.25□□□□□ -0.13
LINC00661-202ENST00000547102 PHACTR3Q96KR7 559 aa14.25□□□□□ -0.13
LINC00661-202ENST00000547102 IL17REQ8NFR9 667 aa14.24□□□□□ -0.13
LINC00661-202ENST00000547102 PARP3Q9Y6F1 533 aa14.24□□□□□ -0.13
LINC00661-202ENST00000547102 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 USP42Q9H9J4 1324 aaKnown RBP14.23□□□□□ -0.13
LINC00661-202ENST00000547102 ZPR1O75312 459 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 STARD3NLO95772 234 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 CYP19A1P11511 503 aaPredicted RBP14.23□□□□□ -0.13
LINC00661-202ENST00000547102 GYS1P13807 737 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 RALBP1Q15311 655 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 INTS5Q6P9B9 1019 aaKnown RBP14.23□□□□□ -0.13
LINC00661-202ENST00000547102 ZNF790Q6PG37 636 aa14.23□□□□□ -0.13
LINC00661-202ENST00000547102 SOS1Q07889 1333 aaPredicted RBP14.22□□□□□ -0.13
LINC00661-202ENST00000547102 YBX3P16989 372 aaKnown RBP eCLIP14.22□□□□□ -0.13
LINC00661-202ENST00000547102 COL15A1P39059 1388 aa14.22□□□□□ -0.13
LINC00661-202ENST00000547102 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
LINC00661-202ENST00000547102 DDX10Q13206 875 aaKnown RBP14.21□□□□□ -0.13
LINC00661-202ENST00000547102 ZNF496Q96IT1 587 aaPredicted RBP14.21□□□□□ -0.13
LINC00661-202ENST00000547102 FMNL2Q96PY5 1086 aa14.21□□□□□ -0.13
LINC00661-202ENST00000547102 TEX13AQ9BXU3 409 aaPredicted RBP14.21□□□□□ -0.13
LINC00661-202ENST00000547102 PNNQ9H307 717 aaKnown RBP14.21□□□□□ -0.13
LINC00661-202ENST00000547102 SRP68Q9UHB9 627 aaKnown RBP14.21□□□□□ -0.13
LINC00661-202ENST00000547102 ZBTB1Q9Y2K1 713 aa14.21□□□□□ -0.13
LINC00661-202ENST00000547102 C10orf71Q711Q0 1435 aa14.21□□□□□ -0.13
LINC00661-202ENST00000547102 HEG1Q9ULI3 1381 aa14.21□□□□□ -0.14
LINC00661-202ENST00000547102 KIF13BQ9NQT8 1826 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms