RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 TGFB2P61812 414 aa18.23■□□□□ 0.51
RAB5B-203ENST00000546810 FSTL1Q12841 308 aa18.23■□□□□ 0.51
RAB5B-203ENST00000546810 A0A0G2JLW4 131 aa18.21■□□□□ 0.51
RAB5B-203ENST00000546810 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
RAB5B-203ENST00000546810 LINC00116Q8NCU8 138 aa18.21■□□□□ 0.51
RAB5B-203ENST00000546810 SMG6Q86US8 1419 aaKnown RBP18.21■□□□□ 0.51
RAB5B-203ENST00000546810 GNPATO15228 680 aa18.2■□□□□ 0.5
RAB5B-203ENST00000546810 CYP27B1O15528 508 aa18.2■□□□□ 0.5
RAB5B-203ENST00000546810 RRS1Q15050 365 aaKnown RBP18.2■□□□□ 0.5
RAB5B-203ENST00000546810 PIGBQ92521 554 aa18.2■□□□□ 0.5
RAB5B-203ENST00000546810 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
RAB5B-203ENST00000546810 SIK1P57059 783 aa18.19■□□□□ 0.5
RAB5B-203ENST00000546810 C9orf131Q5VYM1 1079 aa18.19■□□□□ 0.5
RAB5B-203ENST00000546810 PER1O15534 1290 aaPredicted RBP18.18■□□□□ 0.5
RAB5B-203ENST00000546810 FCHSD2O94868 740 aa18.18■□□□□ 0.5
RAB5B-203ENST00000546810 PLEKHG2Q9H7P9 1386 aa18.17■□□□□ 0.5
RAB5B-203ENST00000546810 KIAA1551Q9HCM1 1747 aa18.17■□□□□ 0.5
RAB5B-203ENST00000546810 C10orf71Q711Q0 1435 aa18.16■□□□□ 0.5
RAB5B-203ENST00000546810 DPEP1P16444 411 aa18.16■□□□□ 0.5
RAB5B-203ENST00000546810 AMER1Q5JTC6 1135 aaPredicted RBP18.16■□□□□ 0.5
RAB5B-203ENST00000546810 MORC1Q86VD1 984 aa18.16■□□□□ 0.5
RAB5B-203ENST00000546810 KDM2BQ8NHM5 1336 aa18.16■□□□□ 0.5
RAB5B-203ENST00000546810 KIF13BQ9NQT8 1826 aa18.16■□□□□ 0.5
RAB5B-203ENST00000546810 N4BP2Q86UW6 1770 aaPredicted RBP18.15■□□□□ 0.5
RAB5B-203ENST00000546810 DDX10Q13206 875 aaKnown RBP18.15■□□□□ 0.5
RAB5B-203ENST00000546810 ITPK1Q13572 414 aa18.15■□□□□ 0.5
RAB5B-203ENST00000546810 NPC1L1Q9UHC9 1359 aa18.15■□□□□ 0.5
RAB5B-203ENST00000546810 KIF20BQ96Q89 1820 aa18.14■□□□□ 0.5
RAB5B-203ENST00000546810 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
RAB5B-203ENST00000546810 ATP6V1AP38606 617 aa18.14■□□□□ 0.49
RAB5B-203ENST00000546810 NLGN1Q8N2Q7 840 aa18.14■□□□□ 0.49
RAB5B-203ENST00000546810 CCDC87Q9NVE4 849 aa18.14■□□□□ 0.49
RAB5B-203ENST00000546810 ITGB4P16144 1822 aa18.14■□□□□ 0.49
RAB5B-203ENST00000546810 NKX1-1Q15270 411 aaPredicted RBP18.13■□□□□ 0.49
RAB5B-203ENST00000546810 HSP90AB2PQ58FF8 381 aa18.13■□□□□ 0.49
RAB5B-203ENST00000546810 RRAGCQ9HB90 399 aa18.13■□□□□ 0.49
RAB5B-203ENST00000546810 MAP2P11137 1827 aaKnown RBP18.13■□□□□ 0.49
RAB5B-203ENST00000546810 INSRP06213 1382 aa18.13■□□□□ 0.49
RAB5B-203ENST00000546810 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
RAB5B-203ENST00000546810 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
RAB5B-203ENST00000546810 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
RAB5B-203ENST00000546810 TRAPPC3LQ5T215 181 aa18.12■□□□□ 0.49
RAB5B-203ENST00000546810 SMC1BQ8NDV3 1235 aa18.12■□□□□ 0.49
RAB5B-203ENST00000546810 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
RAB5B-203ENST00000546810 ASAP1Q9ULH1 1129 aa18.12■□□□□ 0.49
RAB5B-203ENST00000546810 RNF181Q9P0P0 153 aa18.11■□□□□ 0.49
RAB5B-203ENST00000546810 RTCBQ9Y3I0 505 aaKnown RBP18.11■□□□□ 0.49
RAB5B-203ENST00000546810 KIF24Q5T7B8 1368 aa18.1■□□□□ 0.49
RAB5B-203ENST00000546810 KCNA3P22001 575 aa18.1■□□□□ 0.49
RAB5B-203ENST00000546810 TNNT2P45379 298 aaPredicted RBP18.1■□□□□ 0.49
RAB5B-203ENST00000546810 FLT4P35916 1363 aa18.09■□□□□ 0.49
RAB5B-203ENST00000546810 PIM2Q9P1W9 311 aa18.09■□□□□ 0.49
RAB5B-203ENST00000546810 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
RAB5B-203ENST00000546810 PARP3Q9Y6F1 533 aa18.09■□□□□ 0.49
RAB5B-203ENST00000546810 CNGB1Q14028 1251 aaPredicted RBP18.08■□□□□ 0.48
RAB5B-203ENST00000546810 DCAF5Q96JK2 942 aa18.08■□□□□ 0.48
RAB5B-203ENST00000546810 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.48
RAB5B-203ENST00000546810 PPM1GO15355 546 aaPredicted RBP18.07■□□□□ 0.48
RAB5B-203ENST00000546810 GYS1P13807 737 aa18.07■□□□□ 0.48
RAB5B-203ENST00000546810 DALRD3Q5D0E6 543 aaKnown RBP18.07■□□□□ 0.48
RAB5B-203ENST00000546810 ARHGEF1Q92888 912 aaKnown RBP18.07■□□□□ 0.48
RAB5B-203ENST00000546810 ATG3Q9NT62 314 aa18.07■□□□□ 0.48
RAB5B-203ENST00000546810 C4AP0C0L4 1744 aa18.06■□□□□ 0.48
RAB5B-203ENST00000546810 PCNTO95613 3336 aa18.06■□□□□ 0.48
RAB5B-203ENST00000546810 BRCA1P38398 1863 aaKnown RBP18.06■□□□□ 0.48
RAB5B-203ENST00000546810 ADRA2BP18089 450 aa18.06■□□□□ 0.48
RAB5B-203ENST00000546810 RFC4P35249 363 aa18.05■□□□□ 0.48
RAB5B-203ENST00000546810 POLKQ9UBT6 870 aa18.05■□□□□ 0.48
RAB5B-203ENST00000546810 EMILIN1Q9Y6C2 1016 aa18.05■□□□□ 0.48
RAB5B-203ENST00000546810 ANKRD26Q9UPS8 1709 aa18.05■□□□□ 0.48
RAB5B-203ENST00000546810 TNRC6CQ9HCJ0 1690 aaKnown RBP18.05■□□□□ 0.48
RAB5B-203ENST00000546810 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
RAB5B-203ENST00000546810 KDRP35968 1356 aa18.04■□□□□ 0.48
RAB5B-203ENST00000546810 RC3H1Q5TC82 1133 aaKnown RBP18.03■□□□□ 0.48
RAB5B-203ENST00000546810 NCAPD2Q15021 1401 aa18.03■□□□□ 0.48
RAB5B-203ENST00000546810 RPS6KA4O75676 772 aa18.02■□□□□ 0.48
RAB5B-203ENST00000546810 PHKG2P15735 406 aa18.02■□□□□ 0.48
RAB5B-203ENST00000546810 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
RAB5B-203ENST00000546810 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.02■□□□□ 0.48
RAB5B-203ENST00000546810 CNTNAP4Q9C0A0 1308 aa18.01■□□□□ 0.47
RAB5B-203ENST00000546810 SLC4A9Q96Q91 983 aa18.01■□□□□ 0.47
RAB5B-203ENST00000546810 RBM42Q9BTD8 480 aaKnown RBP18.01■□□□□ 0.47
RAB5B-203ENST00000546810 ZC3H4Q9UPT8 1303 aaKnown RBP18■□□□□ 0.47
RAB5B-203ENST00000546810 SLC34A2O95436 690 aa18■□□□□ 0.47
RAB5B-203ENST00000546810 VEGFAP15692 232 aaPredicted RBP18■□□□□ 0.47
RAB5B-203ENST00000546810 RALBP1Q15311 655 aa18■□□□□ 0.47
RAB5B-203ENST00000546810 CHRNA5P30532 468 aa17.99■□□□□ 0.47
RAB5B-203ENST00000546810 MTHFSP49914 203 aa17.98■□□□□ 0.47
RAB5B-203ENST00000546810 RASSF7Q02833 373 aa17.98■□□□□ 0.47
RAB5B-203ENST00000546810 GLTPD2A6NH11 291 aa17.97■□□□□ 0.47
RAB5B-203ENST00000546810 DDR1Q08345 913 aa17.97■□□□□ 0.47
RAB5B-203ENST00000546810 EYA1Q99502 592 aa17.97■□□□□ 0.47
RAB5B-203ENST00000546810 FKBP8Q14318 412 aa17.96■□□□□ 0.47
RAB5B-203ENST00000546810 CFAP53Q96M91 514 aa17.96■□□□□ 0.47
RAB5B-203ENST00000546810 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
RAB5B-203ENST00000546810 SRP68Q9UHB9 627 aaKnown RBP17.95■□□□□ 0.46
RAB5B-203ENST00000546810 ZNF831Q5JPB2 1677 aa17.95■□□□□ 0.46
RAB5B-203ENST00000546810 KDM6AO15550 1401 aaPredicted RBP17.95■□□□□ 0.46
RAB5B-203ENST00000546810 SBF1O95248 1867 aa17.95■□□□□ 0.46
RAB5B-203ENST00000546810 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms