RNA–Protein interactions for RNA: ENST00000546774.1

CALCOCO1-205, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-205ENST00000546774 SCN11AQ9UI33 1791 aa11.13□□□□□ -0.63
CALCOCO1-205ENST00000546774 C4BP0C0L5 1744 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 COL24A1Q17RW2 1714 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 ERVV-2B6SEH9 535 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 HMOX1P09601 288 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 HMGB2P26583 209 aaKnown RBP11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 C1orf141Q5JVX7 400 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 COL23A1Q86Y22 540 aaPredicted RBP11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 SLC16A10Q8TF71 515 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 ATG3Q9NT62 314 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 KDRP35968 1356 aa11.12□□□□□ -0.63
CALCOCO1-205ENST00000546774 UBR3Q6ZT12 1888 aa11.11□□□□□ -0.63
CALCOCO1-205ENST00000546774 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
CALCOCO1-205ENST00000546774 SIK1P57059 783 aa11.11□□□□□ -0.63
CALCOCO1-205ENST00000546774 TPRNQ4KMQ1 711 aa11.11□□□□□ -0.63
CALCOCO1-205ENST00000546774 ATP6V1AP38606 617 aa11.1□□□□□ -0.63
CALCOCO1-205ENST00000546774 CABP4P57796 275 aa11.1□□□□□ -0.63
CALCOCO1-205ENST00000546774 FHDC1Q9C0D6 1143 aaPredicted RBP11.1□□□□□ -0.63
CALCOCO1-205ENST00000546774 KDM6AO15550 1401 aaPredicted RBP11.09□□□□□ -0.63
CALCOCO1-205ENST00000546774 AKAP4Q5JQC9 854 aa11.09□□□□□ -0.63
CALCOCO1-205ENST00000546774 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
CALCOCO1-205ENST00000546774 AK7Q96M32 723 aa11.09□□□□□ -0.63
CALCOCO1-205ENST00000546774 SYT17Q9BSW7 474 aa11.09□□□□□ -0.63
CALCOCO1-205ENST00000546774 COL3A1P02461 1466 aaPredicted RBP11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 DCAF8L1A6NGE4 600 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 U2SURPO15042 1029 aaKnown RBP11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 POLD1P28340 1107 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 ITPK1Q13572 414 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 LINC00116Q8NCU8 138 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 FLAD1Q8NFF5 587 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 RBM42Q9BTD8 480 aaKnown RBP11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 LGR6Q9HBX8 967 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 ZNF831Q5JPB2 1677 aa11.08□□□□□ -0.64
CALCOCO1-205ENST00000546774 PHF14O94880 888 aa11.07□□□□□ -0.64
CALCOCO1-205ENST00000546774 MTHFSDQ2M296 383 aaKnown RBP11.07□□□□□ -0.64
CALCOCO1-205ENST00000546774 MSL1Q68DK7 614 aa11.07□□□□□ -0.64
CALCOCO1-205ENST00000546774 MYH14Q7Z406 1995 aaKnown RBP11.07□□□□□ -0.64
CALCOCO1-205ENST00000546774 COL5A3P25940 1745 aaPredicted RBP11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 PPP2R1AP30153 589 aa11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 ERICH6Q7L0X2 663 aa11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 KLHL34Q8N239 644 aa11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 CFAP53Q96M91 514 aa11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 SLC4A9Q96Q91 983 aa11.06□□□□□ -0.64
CALCOCO1-205ENST00000546774 GNPATO15228 680 aa11.05□□□□□ -0.64
CALCOCO1-205ENST00000546774 RNMTO43148 476 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-205ENST00000546774 PTCD1O75127 700 aaKnown RBP11.05□□□□□ -0.64
CALCOCO1-205ENST00000546774 RNF216Q9NWF9 866 aaPredicted RBP11.05□□□□□ -0.64
CALCOCO1-205ENST00000546774 SSFA2P28290 1259 aa11.04□□□□□ -0.64
CALCOCO1-205ENST00000546774 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
CALCOCO1-205ENST00000546774 ADAMTS7Q9UKP4 1686 aa11.04□□□□□ -0.64
CALCOCO1-205ENST00000546774 CHD4Q14839 1912 aa11.03□□□□□ -0.64
CALCOCO1-205ENST00000546774 MAP3K5Q99683 1374 aa11.03□□□□□ -0.64
CALCOCO1-205ENST00000546774 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
CALCOCO1-205ENST00000546774 NUDCQ9Y266 331 aa11.03□□□□□ -0.64
CALCOCO1-205ENST00000546774 TJP1Q07157 1748 aa11.03□□□□□ -0.64
CALCOCO1-205ENST00000546774 U2AF1L5P0DN76 240 aaPredicted RBP11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 PRKAR2BP31323 418 aa11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 U2AF1Q01081 240 aaKnown RBP eCLIP11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 SLC39A6Q13433 755 aa11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 TRAPPC3LQ5T215 181 aa11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 PHACTR3Q96KR7 559 aa11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 RTCBQ9Y3I0 505 aaKnown RBP11.02□□□□□ -0.65
CALCOCO1-205ENST00000546774 MRC1P22897 1456 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 SIPA1L3O60292 1781 aaPredicted RBP11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 YY1P25490 414 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 NLGN2Q8NFZ4 835 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 GAS2L2Q8NHY3 880 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 RSPH6AQ9H0K4 717 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 CNTNAP4Q9C0A0 1308 aa11.01□□□□□ -0.65
CALCOCO1-205ENST00000546774 UTRNP46939 3433 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 CICQ96RK0 1608 aaPredicted RBP11□□□□□ -0.65
CALCOCO1-205ENST00000546774 RPS6KA4O75676 772 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 CRKLP46109 303 aaKnown RBP11□□□□□ -0.65
CALCOCO1-205ENST00000546774 GPR162Q16538 588 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 IL17REQ8NFR9 667 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 ARHGEF1Q92888 912 aaKnown RBP11□□□□□ -0.65
CALCOCO1-205ENST00000546774 C4AP0C0L4 1744 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 UBR2Q8IWV8 1755 aa11□□□□□ -0.65
CALCOCO1-205ENST00000546774 DLG5Q8TDM6 1919 aa10.99□□□□□ -0.65
CALCOCO1-205ENST00000546774 FCHSD2O94868 740 aa10.99□□□□□ -0.65
CALCOCO1-205ENST00000546774 RFC4P35249 363 aa10.99□□□□□ -0.65
CALCOCO1-205ENST00000546774 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
CALCOCO1-205ENST00000546774 DNAJC10Q8IXB1 793 aa10.99□□□□□ -0.65
CALCOCO1-205ENST00000546774 TEFQ10587 303 aa10.98□□□□□ -0.65
CALCOCO1-205ENST00000546774 INTS5Q6P9B9 1019 aaKnown RBP10.98□□□□□ -0.65
CALCOCO1-205ENST00000546774 PELP1Q8IZL8 1130 aaKnown RBP10.98□□□□□ -0.65
CALCOCO1-205ENST00000546774 GOLGB1Q14789 3259 aaKnown RBP10.98□□□□□ -0.65
CALCOCO1-205ENST00000546774 KCPQ6ZWJ8 1503 aa10.98□□□□□ -0.65
CALCOCO1-205ENST00000546774 MMP10P09238 476 aa10.97□□□□□ -0.65
CALCOCO1-205ENST00000546774 CD2APQ9Y5K6 639 aa10.97□□□□□ -0.65
CALCOCO1-205ENST00000546774 CYP19A1P11511 503 aaPredicted RBP10.96□□□□□ -0.65
CALCOCO1-205ENST00000546774 GYS1P13807 737 aa10.96□□□□□ -0.65
CALCOCO1-205ENST00000546774 ZNF790Q6PG37 636 aa10.96□□□□□ -0.65
CALCOCO1-205ENST00000546774 TTC5Q8N0Z6 440 aa10.96□□□□□ -0.65
CALCOCO1-205ENST00000546774 NLGN1Q8N2Q7 840 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms