RNA–Protein interactions for RNA: ENST00000546622.1

MSI1-202, Transcript of musashi RNA binding protein 1, humanhuman

TSL 3

Gene MSI1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-202ENST00000546622 TRIM26Q12899 539 aaPredicted RBP18.28■□□□□ 0.52
MSI1-202ENST00000546622 TRAPPC3LQ5T215 181 aa18.28■□□□□ 0.52
MSI1-202ENST00000546622 ATG3Q9NT62 314 aa18.28■□□□□ 0.52
MSI1-202ENST00000546622 RTCBQ9Y3I0 505 aaKnown RBP18.28■□□□□ 0.52
MSI1-202ENST00000546622 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
MSI1-202ENST00000546622 RBM42Q9BTD8 480 aaKnown RBP18.27■□□□□ 0.52
MSI1-202ENST00000546622 HSP90AB1P08238 724 aaKnown RBP18.26■□□□□ 0.51
MSI1-202ENST00000546622 HSPA6P17066 643 aa18.26■□□□□ 0.51
MSI1-202ENST00000546622 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
MSI1-202ENST00000546622 KIF13BQ9NQT8 1826 aa18.26■□□□□ 0.51
MSI1-202ENST00000546622 IFFO2Q5TF58 517 aa18.25■□□□□ 0.51
MSI1-202ENST00000546622 NLGN1Q8N2Q7 840 aa18.25■□□□□ 0.51
MSI1-202ENST00000546622 TIMELESSQ9UNS1 1208 aa18.25■□□□□ 0.51
MSI1-202ENST00000546622 PLEKHG2Q9H7P9 1386 aa18.25■□□□□ 0.51
MSI1-202ENST00000546622 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
MSI1-202ENST00000546622 PLEKHO1Q53GL0 409 aaPredicted RBP18.24■□□□□ 0.51
MSI1-202ENST00000546622 DCAF5Q96JK2 942 aa18.24■□□□□ 0.51
MSI1-202ENST00000546622 CICQ96RK0 1608 aaPredicted RBP18.23■□□□□ 0.51
MSI1-202ENST00000546622 ZNF831Q5JPB2 1677 aa18.23■□□□□ 0.51
MSI1-202ENST00000546622 RFC4P35249 363 aa18.23■□□□□ 0.51
MSI1-202ENST00000546622 TGFB2P61812 414 aa18.23■□□□□ 0.51
MSI1-202ENST00000546622 BCS1LQ9Y276 419 aa18.23■□□□□ 0.51
MSI1-202ENST00000546622 COL5A3P25940 1745 aaPredicted RBP18.23■□□□□ 0.51
MSI1-202ENST00000546622 KDRP35968 1356 aa18.22■□□□□ 0.51
MSI1-202ENST00000546622 ADRA2BP18089 450 aa18.22■□□□□ 0.51
MSI1-202ENST00000546622 CABP4P57796 275 aa18.22■□□□□ 0.51
MSI1-202ENST00000546622 CCDC87Q9NVE4 849 aa18.22■□□□□ 0.51
MSI1-202ENST00000546622 PXDNLA1KZ92 1463 aa18.21■□□□□ 0.51
MSI1-202ENST00000546622 RC3H1Q5TC82 1133 aaKnown RBP18.21■□□□□ 0.51
MSI1-202ENST00000546622 ZNF530Q6P9A1 599 aaPredicted RBP18.21■□□□□ 0.51
MSI1-202ENST00000546622 ARHGEF1Q92888 912 aaKnown RBP18.21■□□□□ 0.51
MSI1-202ENST00000546622 PARP3Q9Y6F1 533 aa18.21■□□□□ 0.51
MSI1-202ENST00000546622 A0A0G2JLW4 131 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 AMOTQ4VCS5 1084 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 C1orf141Q5JVX7 400 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 C4AP0C0L4 1744 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 KIAA1551Q9HCM1 1747 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 CNTNAP4Q9C0A0 1308 aa18.2■□□□□ 0.5
MSI1-202ENST00000546622 MYH14Q7Z406 1995 aaKnown RBP18.19■□□□□ 0.5
MSI1-202ENST00000546622 KIF3CO14782 793 aa18.19■□□□□ 0.5
MSI1-202ENST00000546622 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
MSI1-202ENST00000546622 ARHGAP27Q6ZUM4 889 aa18.19■□□□□ 0.5
MSI1-202ENST00000546622 C10orf71Q711Q0 1435 aa18.18■□□□□ 0.5
MSI1-202ENST00000546622 FCHSD2O94868 740 aa18.18■□□□□ 0.5
MSI1-202ENST00000546622 MTHFSP49914 203 aa18.18■□□□□ 0.5
MSI1-202ENST00000546622 SLC4A9Q96Q91 983 aa18.18■□□□□ 0.5
MSI1-202ENST00000546622 PTCD1O75127 700 aaKnown RBP18.17■□□□□ 0.5
MSI1-202ENST00000546622 GYS1P13807 737 aa18.17■□□□□ 0.5
MSI1-202ENST00000546622 PANK3Q9H999 370 aa18.17■□□□□ 0.5
MSI1-202ENST00000546622 BRCA1P38398 1863 aaKnown RBP18.17■□□□□ 0.5
MSI1-202ENST00000546622 DPEP1P16444 411 aa18.16■□□□□ 0.5
MSI1-202ENST00000546622 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
MSI1-202ENST00000546622 KDM6AO15550 1401 aaPredicted RBP18.15■□□□□ 0.5
MSI1-202ENST00000546622 EIF4G2P78344 907 aaKnown RBP eCLIP18.15■□□□□ 0.5
MSI1-202ENST00000546622 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
MSI1-202ENST00000546622 TOMM70O94826 608 aa18.14■□□□□ 0.49
MSI1-202ENST00000546622 APLP1P51693 650 aa18.14■□□□□ 0.49
MSI1-202ENST00000546622 CLSPNQ9HAW4 1339 aa18.14■□□□□ 0.49
MSI1-202ENST00000546622 CRKLP46109 303 aaKnown RBP18.13■□□□□ 0.49
MSI1-202ENST00000546622 NFATC2IPQ8NCF5 419 aa18.13■□□□□ 0.49
MSI1-202ENST00000546622 PCGF6Q9BYE7 350 aa18.13■□□□□ 0.49
MSI1-202ENST00000546622 SCN11AQ9UI33 1791 aa18.12■□□□□ 0.49
MSI1-202ENST00000546622 SULT6B1Q6IMI4 303 aa18.12■□□□□ 0.49
MSI1-202ENST00000546622 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
MSI1-202ENST00000546622 C16orf71Q8IYS4 520 aaPredicted RBP18.12■□□□□ 0.49
MSI1-202ENST00000546622 PIM2Q9P1W9 311 aa18.12■□□□□ 0.49
MSI1-202ENST00000546622 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
MSI1-202ENST00000546622 SRP68Q9UHB9 627 aaKnown RBP18.1■□□□□ 0.49
MSI1-202ENST00000546622 VIRMAQ69YN4 1812 aaKnown RBP18.09■□□□□ 0.49
MSI1-202ENST00000546622 TJP1Q07157 1748 aa18.09■□□□□ 0.49
MSI1-202ENST00000546622 USP42Q9H9J4 1324 aaKnown RBP18.09■□□□□ 0.49
MSI1-202ENST00000546622 FKBP8Q14318 412 aa18.09■□□□□ 0.49
MSI1-202ENST00000546622 DALRD3Q5D0E6 543 aaKnown RBP18.09■□□□□ 0.49
MSI1-202ENST00000546622 C9orf131Q5VYM1 1079 aa18.09■□□□□ 0.49
MSI1-202ENST00000546622 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
MSI1-202ENST00000546622 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
MSI1-202ENST00000546622 ZPR1O75312 459 aa18.08■□□□□ 0.48
MSI1-202ENST00000546622 KCNA3P22001 575 aa18.08■□□□□ 0.48
MSI1-202ENST00000546622 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
MSI1-202ENST00000546622 AKAP4Q5JQC9 854 aa18.06■□□□□ 0.48
MSI1-202ENST00000546622 RNF181Q9P0P0 153 aa18.06■□□□□ 0.48
MSI1-202ENST00000546622 SBF1O95248 1867 aa18.05■□□□□ 0.48
MSI1-202ENST00000546622 IL13P35225 146 aa18.05■□□□□ 0.48
MSI1-202ENST00000546622 DDR1Q08345 913 aa18.05■□□□□ 0.48
MSI1-202ENST00000546622 RBM46Q8TBY0 533 aaKnown RBP18.05■□□□□ 0.48
MSI1-202ENST00000546622 WDR90Q96KV7 1748 aa18.04■□□□□ 0.48
MSI1-202ENST00000546622 CHRNA5P30532 468 aa18.04■□□□□ 0.48
MSI1-202ENST00000546622 INTS5Q6P9B9 1019 aaKnown RBP18.04■□□□□ 0.48
MSI1-202ENST00000546622 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
MSI1-202ENST00000546622 SLC52A2Q9HAB3 445 aa18.04■□□□□ 0.48
MSI1-202ENST00000546622 POLRMTO00411 1230 aaKnown RBP18.03■□□□□ 0.48
MSI1-202ENST00000546622 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
MSI1-202ENST00000546622 KCPQ6ZWJ8 1503 aa18.03■□□□□ 0.48
MSI1-202ENST00000546622 AFDNP55196 1824 aaKnown RBP18.02■□□□□ 0.48
MSI1-202ENST00000546622 TNRC6CQ9HCJ0 1690 aaKnown RBP18.02■□□□□ 0.47
MSI1-202ENST00000546622 TM4SF1P30408 202 aa18.01■□□□□ 0.47
MSI1-202ENST00000546622 LGR6Q9HBX8 967 aa18.01■□□□□ 0.47
MSI1-202ENST00000546622 ADAMTS7Q9UKP4 1686 aa18.01■□□□□ 0.47
MSI1-202ENST00000546622 SOS1Q07889 1333 aaPredicted RBP18■□□□□ 0.47
MSI1-202ENST00000546622 RNMTO43148 476 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms