RNA–Protein interactions for RNA: ENST00000546584.1

TGFBR1-203, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 4

Gene TGFBR1, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-203ENST00000546584 PTGIRP43119 386 aa9.48□□□□□ -0.89
TGFBR1-203ENST00000546584 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
TGFBR1-203ENST00000546584 CCDC82Q8N4S0 544 aa9.48□□□□□ -0.89
TGFBR1-203ENST00000546584 CLUAP1Q96AJ1 413 aa9.48□□□□□ -0.89
TGFBR1-203ENST00000546584 STK17AQ9UEE5 414 aa9.48□□□□□ -0.89
TGFBR1-203ENST00000546584 RAD21O60216 631 aa9.47□□□□□ -0.89
TGFBR1-203ENST00000546584 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
TGFBR1-203ENST00000546584 CCDC155Q8N6L0 562 aa9.47□□□□□ -0.89
TGFBR1-203ENST00000546584 RNF217Q8TC41 542 aa9.47□□□□□ -0.89
TGFBR1-203ENST00000546584 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
TGFBR1-203ENST00000546584 ATP5J2-PTCD1G3V325 749 aa9.46□□□□□ -0.9
TGFBR1-203ENST00000546584 MEN1O00255 615 aa9.46□□□□□ -0.9
TGFBR1-203ENST00000546584 ESF1Q9H501 851 aaKnown RBP9.46□□□□□ -0.9
TGFBR1-203ENST00000546584 WRNQ14191 1432 aaPredicted RBP eCLIP9.46□□□□□ -0.9
TGFBR1-203ENST00000546584 PLB1Q6P1J6 1458 aa9.46□□□□□ -0.9
TGFBR1-203ENST00000546584 ZBTB7CA1YPR0 619 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 FOXD4L5Q5VV16 416 aaPredicted RBP9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 TRIM52Q96A61 297 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 PRM3Q9NNZ6 103 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 ABCC2Q92887 1545 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 MAP3K4Q9Y6R4 1608 aa9.45□□□□□ -0.9
TGFBR1-203ENST00000546584 CDC14CA4D256 554 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 VSIG8P0DPA2 414 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 SCTRP47872 440 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 CC2D2BQ6DHV5 1058 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 ZNF592Q92610 1267 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 SERPINA10Q9UK55 444 aa9.44□□□□□ -0.9
TGFBR1-203ENST00000546584 RHOQP17081 205 aa9.43□□□□□ -0.9
TGFBR1-203ENST00000546584 MCCD1P59942 119 aaPredicted RBP9.43□□□□□ -0.9
TGFBR1-203ENST00000546584 PRICKLE2Q7Z3G6 844 aa9.43□□□□□ -0.9
TGFBR1-203ENST00000546584 FNBP4Q8N3X1 1017 aaPredicted RBP9.43□□□□□ -0.9
TGFBR1-203ENST00000546584 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 TEX14Q8IWB6 1497 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 ASXL2Q76L83 1435 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 ABL2P42684 1182 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 LYSMD3Q7Z3D4 306 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 BIVM-ERCC5R4GMW8 1640 aa9.42□□□□□ -0.9
TGFBR1-203ENST00000546584 KIAA0586Q9BVV6 1533 aa9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 SLC35F4A4IF30 521 aa9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 ERVK-9P63128 1117 aa9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 ILDR2Q71H61 639 aa9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
TGFBR1-203ENST00000546584 A0A1W2PRU2 124 aa9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 VAC14Q08AM6 782 aa9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 VWA5B2Q8N398 1253 aa9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 GPR161Q8N6U8 529 aaKnown RBP9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 ARHGEF10LQ9HCE6 1279 aa9.4□□□□□ -0.9
TGFBR1-203ENST00000546584 EPRSP07814 1512 aaKnown RBP9.4□□□□□ -0.91
TGFBR1-203ENST00000546584 ITGA6P23229 1130 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 EIF4G2P78344 907 aaKnown RBP eCLIP9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 IRF5Q13568 498 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 SLC27A3Q5K4L6 730 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 CYP2U1Q7Z449 544 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 CNTNAP3BQ96NU0 1288 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 NLRP3Q96P20 1036 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 CNTNAP3Q9BZ76 1288 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 RAB6BQ9NRW1 208 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 CEP126Q9P2H0 1117 aa9.39□□□□□ -0.91
TGFBR1-203ENST00000546584 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
TGFBR1-203ENST00000546584 CCDC125Q86Z20 511 aa9.38□□□□□ -0.91
TGFBR1-203ENST00000546584 CCDC9Q9Y3X0 531 aaKnown RBP9.38□□□□□ -0.91
TGFBR1-203ENST00000546584 SENP3-EIF4A1A0A087X0R7 540 aa9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 RNF144AP50876 292 aaPredicted RBP9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 CCDC85AQ96PX6 553 aaPredicted RBP9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 COL25A1Q9BXS0 654 aaPredicted RBP9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 OSBPL3Q9H4L5 887 aa9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 PTPRGP23470 1445 aa9.37□□□□□ -0.91
TGFBR1-203ENST00000546584 KDM5BQ9UGL1 1544 aa9.36□□□□□ -0.91
TGFBR1-203ENST00000546584 ADAMTSL3P82987 1691 aa9.36□□□□□ -0.91
TGFBR1-203ENST00000546584 MYCP01106 439 aaPredicted RBP9.36□□□□□ -0.91
TGFBR1-203ENST00000546584 SV2AQ7L0J3 742 aa9.36□□□□□ -0.91
TGFBR1-203ENST00000546584 PCF11O94913 1555 aaKnown RBP9.35□□□□□ -0.91
TGFBR1-203ENST00000546584 KRT76Q01546 638 aa9.35□□□□□ -0.91
TGFBR1-203ENST00000546584 SLFNL1Q499Z3 407 aa9.35□□□□□ -0.91
TGFBR1-203ENST00000546584 KCTD17Q8N5Z5 321 aa9.35□□□□□ -0.91
TGFBR1-203ENST00000546584 COG6Q9Y2V7 657 aa9.35□□□□□ -0.91
TGFBR1-203ENST00000546584 PTPRMP28827 1452 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 POU4F2Q12837 409 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 RIPOR1Q6ZS17 1223 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 RNF135Q8IUD6 432 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 WWC1Q8IX03 1113 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 ZNF777Q9ULD5 760 aaPredicted RBP9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 DOLKQ9UPQ8 538 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 CUL7Q14999 1698 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 MAGI3Q5TCQ9 1506 aa9.34□□□□□ -0.91
TGFBR1-203ENST00000546584 CLN3Q13286 438 aa9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 TSGA10IPQ3SY00 556 aa9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 RNFT1Q5M7Z0 435 aa9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 NANOS1Q8WY41 292 aaKnown RBP9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 POM121Q96HA1 1249 aa9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 GAS2L1Q99501 681 aaPredicted RBP9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 CUEDC1Q9NWM3 386 aaPredicted RBP9.33□□□□□ -0.92
TGFBR1-203ENST00000546584 TNIKQ9UKE5 1360 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms