RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 TRPM3Q9HCF6 1732 aaPredicted RBP10.35□□□□□ -0.75
CCDC60-205ENST00000546345 UNC5CLQ8IV45 518 aa10.34□□□□□ -0.75
CCDC60-205ENST00000546345 SLF2Q8IX21 1173 aa10.34□□□□□ -0.75
CCDC60-205ENST00000546345 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
CCDC60-205ENST00000546345 SEPT12Q8IYM1 358 aa10.33□□□□□ -0.76
CCDC60-205ENST00000546345 RNF166Q96A37 237 aaPredicted RBP10.33□□□□□ -0.76
CCDC60-205ENST00000546345 MYOM1P52179 1685 aa10.33□□□□□ -0.76
CCDC60-205ENST00000546345 ALS2Q96Q42 1657 aa10.33□□□□□ -0.76
CCDC60-205ENST00000546345 UTRNP46939 3433 aa10.33□□□□□ -0.76
CCDC60-205ENST00000546345 COL14A1Q05707 1796 aaKnown RBP10.32□□□□□ -0.76
CCDC60-205ENST00000546345 RNF40O75150 1001 aa10.32□□□□□ -0.76
CCDC60-205ENST00000546345 BCAMP50895 628 aa10.32□□□□□ -0.76
CCDC60-205ENST00000546345 THSD4Q6ZMP0 1018 aa10.32□□□□□ -0.76
CCDC60-205ENST00000546345 TMUB1Q9BVT8 246 aa10.32□□□□□ -0.76
CCDC60-205ENST00000546345 RGPD3A6NKT7 1758 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-205ENST00000546345 RGPD4Q7Z3J3 1758 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 NRKQ7Z2Y5 1582 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 XPCQ01831 940 aaPredicted RBP10.31□□□□□ -0.76
CCDC60-205ENST00000546345 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 SF3B2Q13435 895 aaKnown RBP10.31□□□□□ -0.76
CCDC60-205ENST00000546345 IFFO2Q5TF58 517 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 REPIN1Q9BWE0 567 aaKnown RBP10.31□□□□□ -0.76
CCDC60-205ENST00000546345 HFM1A2PYH4 1435 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 NPHP3Q7Z494 1330 aa10.31□□□□□ -0.76
CCDC60-205ENST00000546345 DDX11L8A8MPP1 907 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 BAG6P46379 1132 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 PPP4CP60510 307 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 KRT27Q7Z3Y8 459 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 PARP9Q8IXQ6 854 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 NECTIN2Q92692 538 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 HPS5Q9UPZ3 1129 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 SBF2Q86WG5 1849 aa10.3□□□□□ -0.76
CCDC60-205ENST00000546345 VPS72Q15906 364 aa10.29□□□□□ -0.76
CCDC60-205ENST00000546345 GIGYF2Q6Y7W6 1299 aaKnown RBP10.29□□□□□ -0.76
CCDC60-205ENST00000546345 TSR3Q9UJK0 312 aaKnown RBP10.29□□□□□ -0.76
CCDC60-205ENST00000546345 NAIPQ13075 1403 aa10.28□□□□□ -0.76
CCDC60-205ENST00000546345 TNS3Q68CZ2 1445 aa10.28□□□□□ -0.76
CCDC60-205ENST00000546345 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
CCDC60-205ENST00000546345 PTPN5P54829 565 aa10.28□□□□□ -0.76
CCDC60-205ENST00000546345 NEUROD2Q15784 382 aa10.28□□□□□ -0.76
CCDC60-205ENST00000546345 RDH13Q8NBN7 331 aa10.28□□□□□ -0.76
CCDC60-205ENST00000546345 FAM217BQ9NTX9 383 aaPredicted RBP10.28□□□□□ -0.76
CCDC60-205ENST00000546345 CCDC144AA2RUR9 1427 aa10.27□□□□□ -0.77
CCDC60-205ENST00000546345 SPATA31A3Q5VYP0 1347 aa10.27□□□□□ -0.77
CCDC60-205ENST00000546345 PHRF1Q9P1Y6 1649 aaKnown RBP10.26□□□□□ -0.77
CCDC60-205ENST00000546345 SLC10A3P09131 477 aa10.26□□□□□ -0.77
CCDC60-205ENST00000546345 NINLQ9Y2I6 1382 aa10.26□□□□□ -0.77
CCDC60-205ENST00000546345 TECPR2O15040 1411 aa10.25□□□□□ -0.77
CCDC60-205ENST00000546345 FOXO3O43524 673 aa10.25□□□□□ -0.77
CCDC60-205ENST00000546345 FAM182BQ5T319 152 aa10.25□□□□□ -0.77
CCDC60-205ENST00000546345 GPBP1L1Q9HC44 474 aaPredicted RBP10.25□□□□□ -0.77
CCDC60-205ENST00000546345 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
CCDC60-205ENST00000546345 CEP350Q5VT06 3117 aa10.25□□□□□ -0.77
CCDC60-205ENST00000546345 PEAK1Q9H792 1746 aa10.24□□□□□ -0.77
CCDC60-205ENST00000546345 WNK3Q9BYP7 1800 aa10.24□□□□□ -0.77
CCDC60-205ENST00000546345 CD46P15529 392 aa10.24□□□□□ -0.77
CCDC60-205ENST00000546345 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
CCDC60-205ENST00000546345 EZH2Q15910 746 aaKnown RBP10.24□□□□□ -0.77
CCDC60-205ENST00000546345 KDM4CQ9H3R0 1056 aa10.24□□□□□ -0.77
CCDC60-205ENST00000546345 HCSTQ9UBK5 93 aa10.24□□□□□ -0.77
CCDC60-205ENST00000546345 ESCO1Q5FWF5 840 aa10.23□□□□□ -0.77
CCDC60-205ENST00000546345 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CCDC60-205ENST00000546345 PARP4Q9UKK3 1724 aaKnown RBP10.22□□□□□ -0.77
CCDC60-205ENST00000546345 SENP3-EIF4A1A0A087X0R7 540 aa10.22□□□□□ -0.77
CCDC60-205ENST00000546345 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
CCDC60-205ENST00000546345 NYAP1Q6ZVC0 841 aa10.22□□□□□ -0.77
CCDC60-205ENST00000546345 ZNF784Q8NCA9 323 aaPredicted RBP10.22□□□□□ -0.77
CCDC60-205ENST00000546345 CAMKK2Q96RR4 588 aa10.22□□□□□ -0.77
CCDC60-205ENST00000546345 PARD3Q8TEW0 1356 aa10.22□□□□□ -0.77
CCDC60-205ENST00000546345 SHANK3Q9BYB0 1731 aa10.21□□□□□ -0.77
CCDC60-205ENST00000546345 CFHP08603 1231 aa10.21□□□□□ -0.77
CCDC60-205ENST00000546345 MS4A1P11836 297 aa10.21□□□□□ -0.77
CCDC60-205ENST00000546345 CABLES1Q8TDN4 633 aa10.21□□□□□ -0.77
CCDC60-205ENST00000546345 PRR14Q9BWN1 585 aa10.21□□□□□ -0.77
CCDC60-205ENST00000546345 LRPPRCP42704 1394 aaKnown RBP10.21□□□□□ -0.78
CCDC60-205ENST00000546345 ROCK1Q13464 1354 aa10.21□□□□□ -0.78
CCDC60-205ENST00000546345 PLEKHH1Q9ULM0 1364 aa10.21□□□□□ -0.78
CCDC60-205ENST00000546345 NUP155O75694 1391 aa10.2□□□□□ -0.78
CCDC60-205ENST00000546345 GCGRP47871 477 aa10.2□□□□□ -0.78
CCDC60-205ENST00000546345 ZNF326Q5BKZ1 582 aaKnown RBP10.2□□□□□ -0.78
CCDC60-205ENST00000546345 BEGAINQ9BUH8 593 aa10.2□□□□□ -0.78
CCDC60-205ENST00000546345 RRBP1Q9P2E9 1410 aaKnown RBP10.2□□□□□ -0.78
CCDC60-205ENST00000546345 CCDC9Q9Y3X0 531 aaKnown RBP10.19□□□□□ -0.78
CCDC60-205ENST00000546345 APLP1P51693 650 aa10.18□□□□□ -0.78
CCDC60-205ENST00000546345 LMO7Q8WWI1 1683 aa10.18□□□□□ -0.78
CCDC60-205ENST00000546345 LRRC37A3O60309 1634 aa10.18□□□□□ -0.78
CCDC60-205ENST00000546345 SBNO1A3KN83 1393 aa10.17□□□□□ -0.78
CCDC60-205ENST00000546345 A0A0G2JS52 829 aa10.17□□□□□ -0.78
CCDC60-205ENST00000546345 FAM83GA6ND36 823 aa10.17□□□□□ -0.78
CCDC60-205ENST00000546345 MYT1Q01538 1121 aa10.17□□□□□ -0.78
CCDC60-205ENST00000546345 NUTM1Q86Y26 1132 aa10.17□□□□□ -0.78
CCDC60-205ENST00000546345 AKAP12Q02952 1782 aa10.16□□□□□ -0.78
CCDC60-205ENST00000546345 SPATA31A5Q5VU36 1347 aa10.16□□□□□ -0.78
CCDC60-205ENST00000546345 SPATA31A7Q8IWB4 1347 aa10.16□□□□□ -0.78
CCDC60-205ENST00000546345 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
CCDC60-205ENST00000546345 C1QTNF8P60827 252 aa10.16□□□□□ -0.78
CCDC60-205ENST00000546345 COL24A1Q17RW2 1714 aa10.16□□□□□ -0.78
CCDC60-205ENST00000546345 ARHGEF10O15013 1369 aa10.15□□□□□ -0.78
CCDC60-205ENST00000546345 KDM4AO75164 1064 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms