RNA–Protein interactions for RNA: ENST00000546312.5

SLC3A2-223, Transcript of solute carrier family 3 member 2, human

TSL 2

Gene SLC3A2, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC3A2-223	ENST00000546312	WWC1	Q8IX03	1113 aa		11.85	□□□□□ -0.51
SLC3A2-223	ENST00000546312	RAPGEF4	Q8WZA2	1011 aa		11.85	□□□□□ -0.51
SLC3A2-223	ENST00000546312	EYA1	Q99502	592 aa		11.85	□□□□□ -0.51
SLC3A2-223	ENST00000546312	PARP4	Q9UKK3	1724 aa	Known RBP	11.85	□□□□□ -0.51
SLC3A2-223	ENST00000546312	RGL2	O15211	777 aa		11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	IL13	P35225	146 aa		11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	CALD1	Q05682	793 aa	Known RBP	11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	RGS12	O14924	1447 aa		11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	THSD7A	Q9UPZ6	1657 aa		11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	IL16	Q14005	1332 aa		11.84	□□□□□ -0.51
SLC3A2-223	ENST00000546312	RASEF	Q8IZ41	740 aa		11.83	□□□□□ -0.52
SLC3A2-223	ENST00000546312	KAT6B	Q8WYB5	2073 aa		11.83	□□□□□ -0.52
SLC3A2-223	ENST00000546312	ZNF428	Q96B54	188 aa		11.82	□□□□□ -0.52
SLC3A2-223	ENST00000546312	CHMP4B	Q9H444	224 aa	Known RBP	11.82	□□□□□ -0.52
SLC3A2-223	ENST00000546312	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.82	□□□□□ -0.52
SLC3A2-223	ENST00000546312	IGSF1	Q8N6C5	1336 aa		11.82	□□□□□ -0.52
SLC3A2-223	ENST00000546312	FAM196A	Q6ZSG2	479 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	CCDC125	Q86Z20	511 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	ZCRB1	Q8TBF4	217 aa	Known RBP	11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	DDRGK1	Q96HY6	314 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	CRBN	Q96SW2	442 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	SPG7	Q9UQ90	795 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	MAPK8IP3	Q9UPT6	1336 aa		11.81	□□□□□ -0.52
SLC3A2-223	ENST00000546312	DISP2	A7MBM2	1401 aa		11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	FCHSD2	O94868	740 aa		11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	U2AF1L5	P0DN76	240 aa	Predicted RBP	11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	CANX	P27824	592 aa	Known RBP	11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	FXR2	P51116	673 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	U2AF1	Q01081	240 aa	Known RBP eCLIP	11.8	□□□□□ -0.52	2e-23	■□□□□ 11.2
SLC3A2-223	ENST00000546312	SULT6B1	Q6IMI4	303 aa		11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	CCDC146	Q8IYE0	955 aa		11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	USHBP1	Q8N6Y0	703 aa		11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	IPO9	Q96P70	1041 aa	Known RBP	11.8	□□□□□ -0.52
SLC3A2-223	ENST00000546312	PLEKHG2	Q9H7P9	1386 aa		11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	NCAPD2	Q15021	1401 aa		11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	U2SURP	O15042	1029 aa	Known RBP	11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	AMOT	Q4VCS5	1084 aa		11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	RGPD1	P0DJD0	1748 aa		11.79	□□□□□ -0.52
SLC3A2-223	ENST00000546312	DDX54	Q8TDD1	881 aa	Known RBP	11.78	□□□□□ -0.52
SLC3A2-223	ENST00000546312	LRRC37A3	O60309	1634 aa		11.78	□□□□□ -0.52
SLC3A2-223	ENST00000546312	OVOS2	A0A0G2JMS6	1433 aa		11.77	□□□□□ -0.52
SLC3A2-223	ENST00000546312	SOCS7	O14512	581 aa		11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	IPO8	O15397	1037 aa	Known RBP	11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PDE4A	P27815	886 aa		11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PIP4P2	Q8N4L2	257 aa		11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	MARCH10	Q8NA82	808 aa	Predicted RBP	11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	BACH2	Q9BYV9	841 aa		11.77	□□□□□ -0.53
SLC3A2-223	ENST00000546312	SBF2	Q86WG5	1849 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	COL3A1	P02461	1466 aa	Predicted RBP	11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	HMOX1	P09601	288 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	LMOD3	Q0VAK6	560 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	SF3B2	Q13435	895 aa	Known RBP	11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	NOP58	Q9Y2X3	529 aa	Known RBP	11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	KDM2B	Q8NHM5	1336 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PCDH11X	Q9BZA7	1347 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PCDH11Y	Q9BZA8	1340 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	KDR	P35968	1356 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	TNS2	Q63HR2	1409 aa		11.76	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PKD1L3	Q7Z443	1732 aa		11.75	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PLIN1	O60240	522 aa		11.75	□□□□□ -0.53
SLC3A2-223	ENST00000546312	IFNL2	Q8IZJ0	200 aa		11.75	□□□□□ -0.53
SLC3A2-223	ENST00000546312	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.75	□□□□□ -0.53
SLC3A2-223	ENST00000546312	MEGF6	O75095	1541 aa		11.75	□□□□□ -0.53
SLC3A2-223	ENST00000546312	HSP90AB1	P08238	724 aa	Known RBP	11.74	□□□□□ -0.53
SLC3A2-223	ENST00000546312	RARS	P54136	660 aa	Known RBP	11.74	□□□□□ -0.53
SLC3A2-223	ENST00000546312	FAM182B	Q5T319	152 aa		11.74	□□□□□ -0.53
SLC3A2-223	ENST00000546312	UPF1	Q92900	1129 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
SLC3A2-223	ENST00000546312	BCL9	O00512	1426 aa		11.74	□□□□□ -0.53
SLC3A2-223	ENST00000546312	EIF5B	O60841	1220 aa	Known RBP	11.73	□□□□□ -0.53
SLC3A2-223	ENST00000546312	C1orf141	Q5JVX7	400 aa		11.73	□□□□□ -0.53
SLC3A2-223	ENST00000546312	AEBP1	Q8IUX7	1158 aa		11.73	□□□□□ -0.53
SLC3A2-223	ENST00000546312	SHANK3	Q9BYB0	1731 aa		11.73	□□□□□ -0.53
SLC3A2-223	ENST00000546312	RWDD1	Q9H446	243 aa	Predicted RBP	11.73	□□□□□ -0.53
SLC3A2-223	ENST00000546312	SENP3-EIF4A1	A0A087X0R7	540 aa		11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	TMPO	P42166	694 aa	Known RBP	11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	NKX1-1	Q15270	411 aa	Predicted RBP	11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	FAM161A	Q3B820	660 aa		11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	ZKSCAN2	Q63HK3	967 aa		11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	CLUAP1	Q96AJ1	413 aa		11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	RSPH6A	Q9H0K4	717 aa		11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	DAXX	Q9UER7	740 aa	Predicted RBP	11.72	□□□□□ -0.53
SLC3A2-223	ENST00000546312	CYP27B1	O15528	508 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	TRIM37	O94972	964 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PYGB	P11216	843 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PHKG2	P15735	406 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PRKAR2B	P31323	418 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	ALDH1L2	Q3SY69	923 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	AKAP4	Q5JQC9	854 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	GAS2L2	Q8NHY3	880 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	PLEKHF1	Q96S99	279 aa		11.71	□□□□□ -0.53
SLC3A2-223	ENST00000546312	VIRMA	Q69YN4	1812 aa	Known RBP	11.71	□□□□□ -0.54
SLC3A2-223	ENST00000546312	KIF16B	Q96L93	1317 aa		11.7	□□□□□ -0.54
SLC3A2-223	ENST00000546312	BRPF1	P55201	1214 aa	Predicted RBP	11.7	□□□□□ -0.54
SLC3A2-223	ENST00000546312	DCAF5	Q96JK2	942 aa		11.7	□□□□□ -0.54
SLC3A2-223	ENST00000546312	ITGB4	P16144	1822 aa		11.7	□□□□□ -0.54
SLC3A2-223	ENST00000546312	ERVV-2	B6SEH9	535 aa		11.69	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 694.7 ms