RNA–Protein interactions for RNA: ENST00000546000.1

CADM1-220, Transcript of cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CADM1, Length 734 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-220ENST00000546000 ACSBG1Q96GR2 724 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 IFT57Q9NWB7 429 aa22.2■■□□□ 1.14
CADM1-220ENST00000546000 SLC52A2Q9HAB3 445 aa22.19■■□□□ 1.14
CADM1-220ENST00000546000 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
CADM1-220ENST00000546000 ITGB4P16144 1822 aa22.19■■□□□ 1.14
CADM1-220ENST00000546000 CALD1Q05682 793 aaKnown RBP22.18■■□□□ 1.14
CADM1-220ENST00000546000 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
CADM1-220ENST00000546000 UPF1Q92900 1129 aaKnown RBP eCLIP22.18■■□□□ 1.14
CADM1-220ENST00000546000 KCNQ3O43525 872 aa22.17■■□□□ 1.14
CADM1-220ENST00000546000 CFAP44Q96MT7 982 aa22.17■■□□□ 1.14
CADM1-220ENST00000546000 TSPYL4Q9UJ04 414 aa22.17■■□□□ 1.14
CADM1-220ENST00000546000 PAPPAQ13219 1627 aa22.17■■□□□ 1.14
CADM1-220ENST00000546000 CHL1O00533 1208 aa22.16■■□□□ 1.14
CADM1-220ENST00000546000 CABP4P57796 275 aa22.16■■□□□ 1.14
CADM1-220ENST00000546000 GNAI1P63096 354 aa22.16■■□□□ 1.14
CADM1-220ENST00000546000 KRT24Q2M2I5 525 aa22.16■■□□□ 1.14
CADM1-220ENST00000546000 NFATC2IPQ8NCF5 419 aa22.16■■□□□ 1.14
CADM1-220ENST00000546000 SLC39A6Q13433 755 aa22.15■■□□□ 1.14
CADM1-220ENST00000546000 TAF7Q15545 349 aaPredicted RBP22.15■■□□□ 1.14
CADM1-220ENST00000546000 MYH16Q9H6N6 1097 aa22.15■■□□□ 1.14
CADM1-220ENST00000546000 BTBD11A6QL63 1104 aa22.14■■□□□ 1.13
CADM1-220ENST00000546000 ERVV-2B6SEH9 535 aa22.14■■□□□ 1.13
CADM1-220ENST00000546000 PRIM1P49642 420 aaKnown RBP22.14■■□□□ 1.13
CADM1-220ENST00000546000 SYTL4Q96C24 671 aaPredicted RBP22.14■■□□□ 1.13
CADM1-220ENST00000546000 NHSQ6T4R5 1651 aa22.14■■□□□ 1.13
CADM1-220ENST00000546000 KCNQ2O43526 872 aa22.13■■□□□ 1.13
CADM1-220ENST00000546000 EXOSC9Q06265 439 aaKnown RBP22.13■■□□□ 1.13
CADM1-220ENST00000546000 PTF1AQ7RTS3 328 aa22.13■■□□□ 1.13
CADM1-220ENST00000546000 KRT27Q7Z3Y8 459 aa22.13■■□□□ 1.13
CADM1-220ENST00000546000 PIGBQ92521 554 aa22.12■■□□□ 1.13
CADM1-220ENST00000546000 TMOD3Q9NYL9 352 aa22.12■■□□□ 1.13
CADM1-220ENST00000546000 BCL9O00512 1426 aa22.12■■□□□ 1.13
CADM1-220ENST00000546000 SBF2Q86WG5 1849 aa22.1■■□□□ 1.13
CADM1-220ENST00000546000 KCPQ6ZWJ8 1503 aa22.1■■□□□ 1.13
CADM1-220ENST00000546000 TSPYL6Q8N831 410 aa22.09■■□□□ 1.13
CADM1-220ENST00000546000 C8orf58Q8NAV2 365 aa22.09■■□□□ 1.13
CADM1-220ENST00000546000 UBR2Q8IWV8 1755 aa22.09■■□□□ 1.13
CADM1-220ENST00000546000 KAT6BQ8WYB5 2073 aa22.08■■□□□ 1.13
CADM1-220ENST00000546000 C5P01031 1676 aa22.08■■□□□ 1.13
CADM1-220ENST00000546000 CENPBP07199 599 aaPredicted RBP22.08■■□□□ 1.13
CADM1-220ENST00000546000 ELL2O00472 640 aaPredicted RBP22.07■■□□□ 1.12
CADM1-220ENST00000546000 ASAP1Q9ULH1 1129 aa22.07■■□□□ 1.12
CADM1-220ENST00000546000 BTAF1O14981 1849 aa22.07■■□□□ 1.12
CADM1-220ENST00000546000 EIF4A1P60842 406 aaKnown RBP22.06■■□□□ 1.12
CADM1-220ENST00000546000 ZNF790Q6PG37 636 aa22.06■■□□□ 1.12
CADM1-220ENST00000546000 ATG3Q9NT62 314 aa22.06■■□□□ 1.12
CADM1-220ENST00000546000 EP400Q96L91 3159 aa22.05■■□□□ 1.12
CADM1-220ENST00000546000 BABAM1Q9NWV8 329 aa22.05■■□□□ 1.12
CADM1-220ENST00000546000 PRAMEF22A3QJZ6 481 aa22.04■■□□□ 1.12
CADM1-220ENST00000546000 ZNF496Q96IT1 587 aaPredicted RBP22.04■■□□□ 1.12
CADM1-220ENST00000546000 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.12
CADM1-220ENST00000546000 PTCD1O75127 700 aaKnown RBP22.02■■□□□ 1.12
CADM1-220ENST00000546000 TWISTNBQ3B726 338 aaPredicted RBP22.02■■□□□ 1.12
CADM1-220ENST00000546000 TTC5Q8N0Z6 440 aa22.02■■□□□ 1.12
CADM1-220ENST00000546000 FAM196AQ6ZSG2 479 aa22.01■■□□□ 1.11
CADM1-220ENST00000546000 HEG1Q9ULI3 1381 aa22■■□□□ 1.11
CADM1-220ENST00000546000 TRIM37O94972 964 aa22■■□□□ 1.11
CADM1-220ENST00000546000 BCL2L13Q9BXK5 485 aa22■■□□□ 1.11
CADM1-220ENST00000546000 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
CADM1-220ENST00000546000 NECTIN2Q92692 538 aa21.99■■□□□ 1.11
CADM1-220ENST00000546000 TJP1Q07157 1748 aa21.99■■□□□ 1.11
CADM1-220ENST00000546000 TNS1Q9HBL0 1735 aaKnown RBP21.98■■□□□ 1.11
CADM1-220ENST00000546000 LAMB4A4D0S4 1761 aa21.98■■□□□ 1.11
CADM1-220ENST00000546000 VAMP4O75379 141 aa21.98■■□□□ 1.11
CADM1-220ENST00000546000 FMNL2Q96PY5 1086 aa21.98■■□□□ 1.11
CADM1-220ENST00000546000 SLC4A9Q96Q91 983 aa21.98■■□□□ 1.11
CADM1-220ENST00000546000 RCAN3Q9UKA8 241 aa21.98■■□□□ 1.11
CADM1-220ENST00000546000 RBM42Q9BTD8 480 aaKnown RBP21.97■■□□□ 1.11
CADM1-220ENST00000546000 GIGYF1O75420 1035 aaPredicted RBP21.96■■□□□ 1.11
CADM1-220ENST00000546000 BCAR3O75815 825 aa21.95■■□□□ 1.1
CADM1-220ENST00000546000 RARSP54136 660 aaKnown RBP21.95■■□□□ 1.1
CADM1-220ENST00000546000 BCL11BQ9C0K0 894 aaPredicted RBP21.95■■□□□ 1.1
CADM1-220ENST00000546000 EIF2S2P20042 333 aaKnown RBP21.94■■□□□ 1.1
CADM1-220ENST00000546000 SSH1Q8WYL5 1049 aa21.94■■□□□ 1.1
CADM1-220ENST00000546000 KCNQ4P56696 695 aa21.93■■□□□ 1.1
CADM1-220ENST00000546000 HDGFL1Q5TGJ6 251 aa21.93■■□□□ 1.1
CADM1-220ENST00000546000 DNAJC10Q8IXB1 793 aa21.93■■□□□ 1.1
CADM1-220ENST00000546000 LY75O60449 1722 aa21.92■■□□□ 1.1
CADM1-220ENST00000546000 ANXA1P04083 346 aa21.91■■□□□ 1.1
CADM1-220ENST00000546000 SNRPA1P09661 255 aaKnown RBP21.91■■□□□ 1.1
CADM1-220ENST00000546000 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
CADM1-220ENST00000546000 PIP4K2AP48426 406 aaPredicted RBP21.91■■□□□ 1.1
CADM1-220ENST00000546000 SMC4Q9NTJ3 1288 aa21.91■■□□□ 1.1
CADM1-220ENST00000546000 USP16Q9Y5T5 823 aa21.91■■□□□ 1.1
CADM1-220ENST00000546000 SRCAPQ6ZRS2 3230 aa21.9■■□□□ 1.1
CADM1-220ENST00000546000 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
CADM1-220ENST00000546000 SIK1P57059 783 aa21.9■■□□□ 1.1
CADM1-220ENST00000546000 ITPK1Q13572 414 aa21.9■■□□□ 1.1
CADM1-220ENST00000546000 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
CADM1-220ENST00000546000 SUPT16HQ9Y5B9 1047 aaKnown RBP21.9■■□□□ 1.1
CADM1-220ENST00000546000 CICQ96RK0 1608 aaPredicted RBP21.9■■□□□ 1.1
CADM1-220ENST00000546000 HOXB7P09629 217 aa21.89■■□□□ 1.09
CADM1-220ENST00000546000 PROSER3Q2NL68 480 aa21.89■■□□□ 1.09
CADM1-220ENST00000546000 MRPL50Q8N5N7 158 aaKnown RBP21.88■■□□□ 1.09
CADM1-220ENST00000546000 CHPF2Q9P2E5 772 aa21.88■■□□□ 1.09
CADM1-220ENST00000546000 COL5A3P25940 1745 aaPredicted RBP21.88■■□□□ 1.09
CADM1-220ENST00000546000 PLIN1O60240 522 aa21.87■■□□□ 1.09
CADM1-220ENST00000546000 TNNQ9UQP3 1299 aa21.87■■□□□ 1.09
CADM1-220ENST00000546000 SOS1Q07889 1333 aaPredicted RBP21.86■■□□□ 1.09
CADM1-220ENST00000546000 ATP6V1AP38606 617 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms