RNA–Protein interactions for RNA: ENST00000545869.5

PDCD2-214, Transcript of programmed cell death 2, humanhuman

TSL 5

Gene PDCD2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-214ENST00000545869 IGSF1Q8N6C5 1336 aa32.5■■■□□ 2.79
PDCD2-214ENST00000545869 SSFA2P28290 1259 aa32.49■■■□□ 2.79
PDCD2-214ENST00000545869 HMGB2P26583 209 aaKnown RBP32.48■■■□□ 2.79
PDCD2-214ENST00000545869 EIF4A2Q14240 407 aaKnown RBP32.48■■■□□ 2.79
PDCD2-214ENST00000545869 ATG3Q9NT62 314 aa32.47■■■□□ 2.79
PDCD2-214ENST00000545869 KDRP35968 1356 aa32.46■■■□□ 2.79
PDCD2-214ENST00000545869 IFNL2Q8IZJ0 200 aa32.46■■■□□ 2.79
PDCD2-214ENST00000545869 GNPATO15228 680 aa32.45■■■□□ 2.79
PDCD2-214ENST00000545869 TNNT2P45379 298 aaPredicted RBP32.45■■■□□ 2.79
PDCD2-214ENST00000545869 KIAA1551Q9HCM1 1747 aa32.45■■■□□ 2.78
PDCD2-214ENST00000545869 ATP6V1AP38606 617 aa32.43■■■□□ 2.78
PDCD2-214ENST00000545869 SLC4A9Q96Q91 983 aa32.43■■■□□ 2.78
PDCD2-214ENST00000545869 COL5A3P25940 1745 aaPredicted RBP32.4■■■□□ 2.78
PDCD2-214ENST00000545869 KIF13BQ9NQT8 1826 aa32.4■■■□□ 2.78
PDCD2-214ENST00000545869 ZNF526Q8TF50 670 aaPredicted RBP32.39■■■□□ 2.78
PDCD2-214ENST00000545869 CICQ96RK0 1608 aaPredicted RBP32.39■■■□□ 2.78
PDCD2-214ENST00000545869 ZNF831Q5JPB2 1677 aa32.38■■■□□ 2.77
PDCD2-214ENST00000545869 PXDNLA1KZ92 1463 aa32.37■■■□□ 2.77
PDCD2-214ENST00000545869 KDM6AO15550 1401 aaPredicted RBP32.37■■■□□ 2.77
PDCD2-214ENST00000545869 GPBP1L1Q9HC44 474 aaPredicted RBP32.37■■■□□ 2.77
PDCD2-214ENST00000545869 MMP10P09238 476 aa32.36■■■□□ 2.77
PDCD2-214ENST00000545869 N4BP2Q86UW6 1770 aaPredicted RBP32.36■■■□□ 2.77
PDCD2-214ENST00000545869 PLEKHG2Q9H7P9 1386 aa32.35■■■□□ 2.77
PDCD2-214ENST00000545869 PANK3Q9H999 370 aa32.35■■■□□ 2.77
PDCD2-214ENST00000545869 MYH14Q7Z406 1995 aaKnown RBP32.35■■■□□ 2.77
PDCD2-214ENST00000545869 C4AP0C0L4 1744 aa32.31■■■□□ 2.76
PDCD2-214ENST00000545869 C10orf71Q711Q0 1435 aa32.3■■■□□ 2.76
PDCD2-214ENST00000545869 ERVV-2B6SEH9 535 aa32.29■■■□□ 2.76
PDCD2-214ENST00000545869 AEBP1Q8IUX7 1158 aa32.29■■■□□ 2.76
PDCD2-214ENST00000545869 RBM42Q9BTD8 480 aaKnown RBP32.29■■■□□ 2.76
PDCD2-214ENST00000545869 RTCBQ9Y3I0 505 aaKnown RBP32.28■■■□□ 2.76
PDCD2-214ENST00000545869 ARHGEF1Q92888 912 aaKnown RBP32.27■■■□□ 2.76
PDCD2-214ENST00000545869 DCAF5Q96JK2 942 aa32.27■■■□□ 2.76
PDCD2-214ENST00000545869 DDX10Q13206 875 aaKnown RBP32.26■■■□□ 2.75
PDCD2-214ENST00000545869 TRAPPC3LQ5T215 181 aa32.26■■■□□ 2.75
PDCD2-214ENST00000545869 ZNF530Q6P9A1 599 aaPredicted RBP32.26■■■□□ 2.75
PDCD2-214ENST00000545869 BRCA1P38398 1863 aaKnown RBP32.26■■■□□ 2.75
PDCD2-214ENST00000545869 CNTNAP4Q9C0A0 1308 aa32.26■■■□□ 2.75
PDCD2-214ENST00000545869 GYS1P13807 737 aa32.24■■■□□ 2.75
PDCD2-214ENST00000545869 PLEKHO1Q53GL0 409 aaPredicted RBP32.24■■■□□ 2.75
PDCD2-214ENST00000545869 RC3H1Q5TC82 1133 aaKnown RBP32.24■■■□□ 2.75
PDCD2-214ENST00000545869 TJP1Q07157 1748 aa32.23■■■□□ 2.75
PDCD2-214ENST00000545869 A0A0G2JLW4 131 aa32.23■■■□□ 2.75
PDCD2-214ENST00000545869 KIF3CO14782 793 aa32.23■■■□□ 2.75
PDCD2-214ENST00000545869 HSPA6P17066 643 aa32.22■■■□□ 2.75
PDCD2-214ENST00000545869 PER1O15534 1290 aaPredicted RBP32.21■■■□□ 2.75
PDCD2-214ENST00000545869 RPS6KA4O75676 772 aa32.21■■■□□ 2.75
PDCD2-214ENST00000545869 HSP90AB1P08238 724 aaKnown RBP32.21■■■□□ 2.75
PDCD2-214ENST00000545869 NLGN1Q8N2Q7 840 aa32.21■■■□□ 2.75
PDCD2-214ENST00000545869 KNSTRNQ9Y448 316 aa32.21■■■□□ 2.75
PDCD2-214ENST00000545869 ADRA2BP18089 450 aa32.2■■■□□ 2.75
PDCD2-214ENST00000545869 CABP4P57796 275 aa32.2■■■□□ 2.75
PDCD2-214ENST00000545869 BCS1LQ9Y276 419 aa32.19■■■□□ 2.74
PDCD2-214ENST00000545869 DPEP1P16444 411 aa32.18■■■□□ 2.74
PDCD2-214ENST00000545869 TGFB2P61812 414 aa32.18■■■□□ 2.74
PDCD2-214ENST00000545869 SCN11AQ9UI33 1791 aa32.17■■■□□ 2.74
PDCD2-214ENST00000545869 PTCD1O75127 700 aaKnown RBP32.17■■■□□ 2.74
PDCD2-214ENST00000545869 AMOTQ4VCS5 1084 aa32.17■■■□□ 2.74
PDCD2-214ENST00000545869 ADAMTS7Q9UKP4 1686 aa32.17■■■□□ 2.74
PDCD2-214ENST00000545869 RFC4P35249 363 aa32.15■■■□□ 2.74
PDCD2-214ENST00000545869 MTHFSP49914 203 aa32.15■■■□□ 2.74
PDCD2-214ENST00000545869 SRP68Q9UHB9 627 aaKnown RBP32.15■■■□□ 2.74
PDCD2-214ENST00000545869 MORC1Q86VD1 984 aa32.14■■■□□ 2.74
PDCD2-214ENST00000545869 NFATC2IPQ8NCF5 419 aa32.14■■■□□ 2.74
PDCD2-214ENST00000545869 CCDC87Q9NVE4 849 aa32.14■■■□□ 2.74
PDCD2-214ENST00000545869 KCNA3P22001 575 aa32.13■■■□□ 2.73
PDCD2-214ENST00000545869 CRKLP46109 303 aaKnown RBP32.13■■■□□ 2.73
PDCD2-214ENST00000545869 SULT6B1Q6IMI4 303 aa32.13■■■□□ 2.73
PDCD2-214ENST00000545869 ARFGEF1Q9Y6D6 1849 aa32.12■■■□□ 2.73
PDCD2-214ENST00000545869 AMER1Q5JTC6 1135 aaPredicted RBP32.12■■■□□ 2.73
PDCD2-214ENST00000545869 NPC1L1Q9UHC9 1359 aa32.11■■■□□ 2.73
PDCD2-214ENST00000545869 IL13P35225 146 aa32.11■■■□□ 2.73
PDCD2-214ENST00000545869 DDR1Q08345 913 aa32.11■■■□□ 2.73
PDCD2-214ENST00000545869 C1orf141Q5JVX7 400 aa32.11■■■□□ 2.73
PDCD2-214ENST00000545869 PARP3Q9Y6F1 533 aa32.11■■■□□ 2.73
PDCD2-214ENST00000545869 IFFO2Q5TF58 517 aa32.1■■■□□ 2.73
PDCD2-214ENST00000545869 FKBP8Q14318 412 aa32.09■■■□□ 2.73
PDCD2-214ENST00000545869 ARHGAP27Q6ZUM4 889 aa32.09■■■□□ 2.73
PDCD2-214ENST00000545869 USP42Q9H9J4 1324 aaKnown RBP32.08■■■□□ 2.73
PDCD2-214ENST00000545869 FCHSD2O94868 740 aa32.08■■■□□ 2.73
PDCD2-214ENST00000545869 VIRMAQ69YN4 1812 aaKnown RBP32.07■■■□□ 2.73
PDCD2-214ENST00000545869 INTS5Q6P9B9 1019 aaKnown RBP32.07■■■□□ 2.72
PDCD2-214ENST00000545869 NMRK2Q9NPI5 230 aa32.05■■■□□ 2.72
PDCD2-214ENST00000545869 MRC1P22897 1456 aa32.04■■■□□ 2.72
PDCD2-214ENST00000545869 DNAJC10Q8IXB1 793 aa32.02■■■□□ 2.72
PDCD2-214ENST00000545869 LGR6Q9HBX8 967 aa32.02■■■□□ 2.72
PDCD2-214ENST00000545869 KCPQ6ZWJ8 1503 aa32■■■□□ 2.71
PDCD2-214ENST00000545869 POLRMTO00411 1230 aaKnown RBP31.99■■■□□ 2.71
PDCD2-214ENST00000545869 CHRNA5P30532 468 aa31.99■■■□□ 2.71
PDCD2-214ENST00000545869 AKAP4Q5JQC9 854 aa31.99■■■□□ 2.71
PDCD2-214ENST00000545869 C9orf131Q5VYM1 1079 aa31.99■■■□□ 2.71
PDCD2-214ENST00000545869 SLC52A2Q9HAB3 445 aa31.99■■■□□ 2.71
PDCD2-214ENST00000545869 CC2D1BQ5T0F9 858 aaKnown RBP31.98■■■□□ 2.71
PDCD2-214ENST00000545869 PIM2Q9P1W9 311 aa31.98■■■□□ 2.71
PDCD2-214ENST00000545869 AFDNP55196 1824 aaKnown RBP31.98■■■□□ 2.71
PDCD2-214ENST00000545869 SOS1Q07889 1333 aaPredicted RBP31.98■■■□□ 2.71
PDCD2-214ENST00000545869 TOMM70O94826 608 aa31.97■■■□□ 2.71
PDCD2-214ENST00000545869 TM4SF1P30408 202 aa31.97■■■□□ 2.71
PDCD2-214ENST00000545869 SLC39A6Q13433 755 aa31.97■■■□□ 2.71
PDCD2-214ENST00000545869 SBF1O95248 1867 aa31.97■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms