RNA–Protein interactions for RNA: ENST00000545720.6

RAP1B-233, Transcript of RAP1B, member of RAS oncogene family, human

TSL 5

Gene RAP1B, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-233	ENST00000545720	COL5A3	P25940	1745 aa	Predicted RBP	32.54	■■■□□ 2.8
RAP1B-233	ENST00000545720	GNPAT	O15228	680 aa		32.53	■■■□□ 2.8
RAP1B-233	ENST00000545720	KNSTRN	Q9Y448	316 aa		32.53	■■■□□ 2.8
RAP1B-233	ENST00000545720	CD2AP	Q9Y5K6	639 aa		32.53	■■■□□ 2.8
RAP1B-233	ENST00000545720	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.52	■■■□□ 2.8
RAP1B-233	ENST00000545720	KDM6A	O15550	1401 aa	Predicted RBP	32.51	■■■□□ 2.8
RAP1B-233	ENST00000545720	KDR	P35968	1356 aa		32.51	■■■□□ 2.79
RAP1B-233	ENST00000545720	ZNF530	Q6P9A1	599 aa	Predicted RBP	32.51	■■■□□ 2.79
RAP1B-233	ENST00000545720	AEBP1	Q8IUX7	1158 aa		32.51	■■■□□ 2.79
RAP1B-233	ENST00000545720	ERVV-2	B6SEH9	535 aa		32.5	■■■□□ 2.79
RAP1B-233	ENST00000545720	GRIN3B	O60391	1043 aa		32.5	■■■□□ 2.79
RAP1B-233	ENST00000545720	HSP90AB1	P08238	724 aa	Known RBP	32.5	■■■□□ 2.79
RAP1B-233	ENST00000545720	DCAF5	Q96JK2	942 aa		32.5	■■■□□ 2.79
RAP1B-233	ENST00000545720	VIRMA	Q69YN4	1812 aa	Known RBP	32.49	■■■□□ 2.79
RAP1B-233	ENST00000545720	SCN11A	Q9UI33	1791 aa		32.48	■■■□□ 2.79
RAP1B-233	ENST00000545720	AMOT	Q4VCS5	1084 aa		32.47	■■■□□ 2.79
RAP1B-233	ENST00000545720	MYH14	Q7Z406	1995 aa	Known RBP	32.47	■■■□□ 2.79
RAP1B-233	ENST00000545720	RBM42	Q9BTD8	480 aa	Known RBP	32.46	■■■□□ 2.79
RAP1B-233	ENST00000545720	SULT6B1	Q6IMI4	303 aa		32.44	■■■□□ 2.78
RAP1B-233	ENST00000545720	SLC4A9	Q96Q91	983 aa		32.44	■■■□□ 2.78
RAP1B-233	ENST00000545720	KIF7	Q2M1P5	1343 aa		32.44	■■■□□ 2.78
RAP1B-233	ENST00000545720	C4A	P0C0L4	1744 aa		32.43	■■■□□ 2.78
RAP1B-233	ENST00000545720	CABP4	P57796	275 aa		32.43	■■■□□ 2.78
RAP1B-233	ENST00000545720	C1orf141	Q5JVX7	400 aa		32.43	■■■□□ 2.78
RAP1B-233	ENST00000545720	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.42	■■■□□ 2.78
RAP1B-233	ENST00000545720	KIF13B	Q9NQT8	1826 aa		32.42	■■■□□ 2.78
RAP1B-233	ENST00000545720	MTHFS	P49914	203 aa		32.41	■■■□□ 2.78
RAP1B-233	ENST00000545720	IL13	P35225	146 aa		32.4	■■■□□ 2.78
RAP1B-233	ENST00000545720	RTCB	Q9Y3I0	505 aa	Known RBP	32.4	■■■□□ 2.78
RAP1B-233	ENST00000545720	WWC3	Q9ULE0	1092 aa		32.39	■■■□□ 2.78
RAP1B-233	ENST00000545720	TJP1	Q07157	1748 aa		32.38	■■■□□ 2.77
RAP1B-233	ENST00000545720	C1QTNF8	P60827	252 aa		32.38	■■■□□ 2.77
RAP1B-233	ENST00000545720	N4BP2	Q86UW6	1770 aa	Predicted RBP	32.37	■■■□□ 2.77
RAP1B-233	ENST00000545720	CIC	Q96RK0	1608 aa	Predicted RBP	32.37	■■■□□ 2.77
RAP1B-233	ENST00000545720	CNTNAP4	Q9C0A0	1308 aa		32.36	■■■□□ 2.77
RAP1B-233	ENST00000545720	MMP10	P09238	476 aa		32.36	■■■□□ 2.77
RAP1B-233	ENST00000545720	TRAPPC3L	Q5T215	181 aa		32.36	■■■□□ 2.77
RAP1B-233	ENST00000545720	KIAA1551	Q9HCM1	1747 aa		32.36	■■■□□ 2.77
RAP1B-233	ENST00000545720	GIGYF1	O75420	1035 aa	Predicted RBP	32.35	■■■□□ 2.77
RAP1B-233	ENST00000545720	RC3H1	Q5TC82	1133 aa	Known RBP	32.34	■■■□□ 2.77
RAP1B-233	ENST00000545720	PTCD1	O75127	700 aa	Known RBP	32.33	■■■□□ 2.77
RAP1B-233	ENST00000545720	NFATC2IP	Q8NCF5	419 aa		32.33	■■■□□ 2.77
RAP1B-233	ENST00000545720	SENP3-EIF4A1	A0A087X0R7	540 aa		32.31	■■■□□ 2.76
RAP1B-233	ENST00000545720	ADRA2B	P18089	450 aa		32.31	■■■□□ 2.76
RAP1B-233	ENST00000545720	ARHGEF1	Q92888	912 aa	Known RBP	32.31	■■■□□ 2.76
RAP1B-233	ENST00000545720	ATP10D	Q9P241	1426 aa		32.31	■■■□□ 2.76
RAP1B-233	ENST00000545720	RPS6KA4	O75676	772 aa		32.29	■■■□□ 2.76
RAP1B-233	ENST00000545720	RFC4	P35249	363 aa		32.28	■■■□□ 2.76
RAP1B-233	ENST00000545720	CC2D1B	Q5T0F9	858 aa	Known RBP	32.28	■■■□□ 2.76
RAP1B-233	ENST00000545720	NLGN1	Q8N2Q7	840 aa		32.28	■■■□□ 2.76
RAP1B-233	ENST00000545720	PXDNL	A1KZ92	1463 aa		32.28	■■■□□ 2.76
RAP1B-233	ENST00000545720	HMOX1	P09601	288 aa		32.27	■■■□□ 2.76
RAP1B-233	ENST00000545720	BRCA1	P38398	1863 aa	Known RBP	32.27	■■■□□ 2.76
RAP1B-233	ENST00000545720	PER1	O15534	1290 aa	Predicted RBP	32.26	■■■□□ 2.75
RAP1B-233	ENST00000545720	AKAP4	Q5JQC9	854 aa		32.26	■■■□□ 2.75
RAP1B-233	ENST00000545720	C10orf71	Q711Q0	1435 aa		32.26	■■■□□ 2.75
RAP1B-233	ENST00000545720	GYS1	P13807	737 aa		32.25	■■■□□ 2.75
RAP1B-233	ENST00000545720	CRKL	P46109	303 aa	Known RBP	32.25	■■■□□ 2.75
RAP1B-233	ENST00000545720	MRC1	P22897	1456 aa		32.24	■■■□□ 2.75
RAP1B-233	ENST00000545720	ADCY9	O60503	1353 aa		32.24	■■■□□ 2.75
RAP1B-233	ENST00000545720	ADAMTS7	Q9UKP4	1686 aa		32.23	■■■□□ 2.75
RAP1B-233	ENST00000545720	SLC52A2	Q9HAB3	445 aa		32.21	■■■□□ 2.75
RAP1B-233	ENST00000545720	LGR6	Q9HBX8	967 aa		32.21	■■■□□ 2.75
RAP1B-233	ENST00000545720	DIAPH1	O60610	1272 aa	Known RBP	32.2	■■■□□ 2.75
RAP1B-233	ENST00000545720	CNGB1	Q14028	1251 aa	Predicted RBP	32.19	■■■□□ 2.74
RAP1B-233	ENST00000545720	CCDC87	Q9NVE4	849 aa		32.19	■■■□□ 2.74
RAP1B-233	ENST00000545720	PARP3	Q9Y6F1	533 aa		32.19	■■■□□ 2.74
RAP1B-233	ENST00000545720	RNMT	O43148	476 aa	Known RBP	32.18	■■■□□ 2.74
RAP1B-233	ENST00000545720	ZNF526	Q8TF50	670 aa	Predicted RBP	32.18	■■■□□ 2.74
RAP1B-233	ENST00000545720	GPBP1L1	Q9HC44	474 aa	Predicted RBP	32.18	■■■□□ 2.74
RAP1B-233	ENST00000545720	SRP68	Q9UHB9	627 aa	Known RBP	32.18	■■■□□ 2.74
RAP1B-233	ENST00000545720		A0A0G2JLW4	131 aa		32.17	■■■□□ 2.74
RAP1B-233	ENST00000545720	TGFB2	P61812	414 aa		32.17	■■■□□ 2.74
RAP1B-233	ENST00000545720	UBR2	Q8IWV8	1755 aa		32.17	■■■□□ 2.74
RAP1B-233	ENST00000545720	COL3A1	P02461	1466 aa	Predicted RBP	32.16	■■■□□ 2.74
RAP1B-233	ENST00000545720	KCP	Q6ZWJ8	1503 aa		32.16	■■■□□ 2.74
RAP1B-233	ENST00000545720	MTHFSD	Q2M296	383 aa	Known RBP	32.16	■■■□□ 2.74
RAP1B-233	ENST00000545720	USP42	Q9H9J4	1324 aa	Known RBP	32.16	■■■□□ 2.74
RAP1B-233	ENST00000545720	ARFGEF1	Q9Y6D6	1849 aa		32.16	■■■□□ 2.74
RAP1B-233	ENST00000545720	SLC39A6	Q13433	755 aa		32.15	■■■□□ 2.74
RAP1B-233	ENST00000545720	DNAJC10	Q8IXB1	793 aa		32.15	■■■□□ 2.74
RAP1B-233	ENST00000545720	INTS5	Q6P9B9	1019 aa	Known RBP	32.14	■■■□□ 2.74
RAP1B-233	ENST00000545720	BCS1L	Q9Y276	419 aa		32.14	■■■□□ 2.74
RAP1B-233	ENST00000545720	FKBP8	Q14318	412 aa		32.13	■■■□□ 2.73
RAP1B-233	ENST00000545720	NPC1L1	Q9UHC9	1359 aa		32.13	■■■□□ 2.73
RAP1B-233	ENST00000545720	DPEP1	P16444	411 aa		32.12	■■■□□ 2.73
RAP1B-233	ENST00000545720	AFDN	P55196	1824 aa	Known RBP	32.1	■■■□□ 2.73
RAP1B-233	ENST00000545720	SIPA1L3	O60292	1781 aa	Predicted RBP	32.09	■■■□□ 2.73
RAP1B-233	ENST00000545720	DDR1	Q08345	913 aa		32.09	■■■□□ 2.73
RAP1B-233	ENST00000545720	SOS1	Q07889	1333 aa	Predicted RBP	32.07	■■■□□ 2.72
RAP1B-233	ENST00000545720	U2SURP	O15042	1029 aa	Known RBP	32.07	■■■□□ 2.72
RAP1B-233	ENST00000545720	CYP19A1	P11511	503 aa	Predicted RBP	32.07	■■■□□ 2.72
RAP1B-233	ENST00000545720	CEP350	Q5VT06	3117 aa		32.06	■■■□□ 2.72
RAP1B-233	ENST00000545720	FCHSD2	O94868	740 aa		32.06	■■■□□ 2.72
RAP1B-233	ENST00000545720	ZPR1	O75312	459 aa		32.05	■■■□□ 2.72
RAP1B-233	ENST00000545720	USPL1	Q5W0Q7	1092 aa		32.04	■■■□□ 2.72
RAP1B-233	ENST00000545720	COL15A1	P39059	1388 aa		32.04	■■■□□ 2.72
RAP1B-233	ENST00000545720	ARHGAP27	Q6ZUM4	889 aa		32.03	■■■□□ 2.72
RAP1B-233	ENST00000545720	KCNA3	P22001	575 aa		32.02	■■■□□ 2.72
RAP1B-233	ENST00000545720	ZBTB1	Q9Y2K1	713 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms