RNA–Protein interactions for RNA: ENST00000544964.6

ACTN1-206, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 891 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-206ENST00000544964 PHF14O94880 888 aa16.96■□□□□ 0.31
ACTN1-206ENST00000544964 HMGB2P26583 209 aaKnown RBP16.96■□□□□ 0.31
ACTN1-206ENST00000544964 PELP1Q8IZL8 1130 aaKnown RBP16.96■□□□□ 0.31
ACTN1-206ENST00000544964 C4AP0C0L4 1744 aa16.96■□□□□ 0.3
ACTN1-206ENST00000544964 CICQ96RK0 1608 aaPredicted RBP16.96■□□□□ 0.3
ACTN1-206ENST00000544964 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
ACTN1-206ENST00000544964 KNSTRNQ9Y448 316 aa16.95■□□□□ 0.3
ACTN1-206ENST00000544964 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
ACTN1-206ENST00000544964 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
ACTN1-206ENST00000544964 MYH14Q7Z406 1995 aaKnown RBP16.95■□□□□ 0.3
ACTN1-206ENST00000544964 SCN11AQ9UI33 1791 aa16.94■□□□□ 0.3
ACTN1-206ENST00000544964 SSFA2P28290 1259 aa16.94■□□□□ 0.3
ACTN1-206ENST00000544964 AEBP1Q8IUX7 1158 aa16.94■□□□□ 0.3
ACTN1-206ENST00000544964 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
ACTN1-206ENST00000544964 PER1O15534 1290 aaPredicted RBP16.93■□□□□ 0.3
ACTN1-206ENST00000544964 SLC4A9Q96Q91 983 aa16.93■□□□□ 0.3
ACTN1-206ENST00000544964 CD2APQ9Y5K6 639 aa16.93■□□□□ 0.3
ACTN1-206ENST00000544964 TJP1Q07157 1748 aa16.93■□□□□ 0.3
ACTN1-206ENST00000544964 GNPATO15228 680 aa16.92■□□□□ 0.3
ACTN1-206ENST00000544964 CNGB1Q14028 1251 aaPredicted RBP16.92■□□□□ 0.3
ACTN1-206ENST00000544964 ATP6V1AP38606 617 aa16.91■□□□□ 0.3
ACTN1-206ENST00000544964 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
ACTN1-206ENST00000544964 MORC1Q86VD1 984 aa16.91■□□□□ 0.3
ACTN1-206ENST00000544964 ERVV-2B6SEH9 535 aa16.9■□□□□ 0.3
ACTN1-206ENST00000544964 ZNF530Q6P9A1 599 aaPredicted RBP16.9■□□□□ 0.3
ACTN1-206ENST00000544964 DCAF5Q96JK2 942 aa16.9■□□□□ 0.3
ACTN1-206ENST00000544964 GRIN3BO60391 1043 aa16.89■□□□□ 0.29
ACTN1-206ENST00000544964 HSP90AB1P08238 724 aaKnown RBP16.89■□□□□ 0.29
ACTN1-206ENST00000544964 ADAMTS7Q9UKP4 1686 aa16.88■□□□□ 0.29
ACTN1-206ENST00000544964 MRC1P22897 1456 aa16.88■□□□□ 0.29
ACTN1-206ENST00000544964 IL13P35225 146 aa16.88■□□□□ 0.29
ACTN1-206ENST00000544964 AMOTQ4VCS5 1084 aa16.88■□□□□ 0.29
ACTN1-206ENST00000544964 PLEKHO1Q53GL0 409 aaPredicted RBP16.88■□□□□ 0.29
ACTN1-206ENST00000544964 CC2D1BQ5T0F9 858 aaKnown RBP16.88■□□□□ 0.29
ACTN1-206ENST00000544964 ADCY9O60503 1353 aa16.88■□□□□ 0.29
ACTN1-206ENST00000544964 N4BP2Q86UW6 1770 aaPredicted RBP16.87■□□□□ 0.29
ACTN1-206ENST00000544964 BRCA1P38398 1863 aaKnown RBP16.87■□□□□ 0.29
ACTN1-206ENST00000544964 CNTNAP4Q9C0A0 1308 aa16.87■□□□□ 0.29
ACTN1-206ENST00000544964 PXDNLA1KZ92 1463 aa16.86■□□□□ 0.29
ACTN1-206ENST00000544964 C1QTNF8P60827 252 aa16.86■□□□□ 0.29
ACTN1-206ENST00000544964 SULT6B1Q6IMI4 303 aa16.86■□□□□ 0.29
ACTN1-206ENST00000544964 C10orf71Q711Q0 1435 aa16.86■□□□□ 0.29
ACTN1-206ENST00000544964 ATP10DQ9P241 1426 aa16.86■□□□□ 0.29
ACTN1-206ENST00000544964 CEP350Q5VT06 3117 aa16.85■□□□□ 0.29
ACTN1-206ENST00000544964 RBM42Q9BTD8 480 aaKnown RBP16.85■□□□□ 0.29
ACTN1-206ENST00000544964 MMP10P09238 476 aa16.84■□□□□ 0.29
ACTN1-206ENST00000544964 CABP4P57796 275 aa16.84■□□□□ 0.29
ACTN1-206ENST00000544964 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
ACTN1-206ENST00000544964 ADRA2BP18089 450 aa16.83■□□□□ 0.28
ACTN1-206ENST00000544964 MTHFSP49914 203 aa16.83■□□□□ 0.28
ACTN1-206ENST00000544964 C1orf141Q5JVX7 400 aa16.83■□□□□ 0.28
ACTN1-206ENST00000544964 RC3H1Q5TC82 1133 aaKnown RBP16.83■□□□□ 0.28
ACTN1-206ENST00000544964 WWC3Q9ULE0 1092 aa16.83■□□□□ 0.28
ACTN1-206ENST00000544964 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
ACTN1-206ENST00000544964 UBR2Q8IWV8 1755 aa16.82■□□□□ 0.28
ACTN1-206ENST00000544964 NPC1L1Q9UHC9 1359 aa16.82■□□□□ 0.28
ACTN1-206ENST00000544964 GIGYF1O75420 1035 aaPredicted RBP16.82■□□□□ 0.28
ACTN1-206ENST00000544964 KCPQ6ZWJ8 1503 aa16.81■□□□□ 0.28
ACTN1-206ENST00000544964 GYS1P13807 737 aa16.81■□□□□ 0.28
ACTN1-206ENST00000544964 TRAPPC3LQ5T215 181 aa16.81■□□□□ 0.28
ACTN1-206ENST00000544964 NFATC2IPQ8NCF5 419 aa16.81■□□□□ 0.28
ACTN1-206ENST00000544964 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
ACTN1-206ENST00000544964 PTCD1O75127 700 aaKnown RBP16.8■□□□□ 0.28
ACTN1-206ENST00000544964 RPS6KA4O75676 772 aa16.8■□□□□ 0.28
ACTN1-206ENST00000544964 SENP3-EIF4A1A0A087X0R7 540 aa16.79■□□□□ 0.28
ACTN1-206ENST00000544964 CRKLP46109 303 aaKnown RBP16.79■□□□□ 0.28
ACTN1-206ENST00000544964 ARFGEF1Q9Y6D6 1849 aa16.79■□□□□ 0.28
ACTN1-206ENST00000544964 AKAP4Q5JQC9 854 aa16.78■□□□□ 0.28
ACTN1-206ENST00000544964 SIPA1L3O60292 1781 aaPredicted RBP16.77■□□□□ 0.28
ACTN1-206ENST00000544964 HMOX1P09601 288 aa16.77■□□□□ 0.28
ACTN1-206ENST00000544964 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
ACTN1-206ENST00000544964 SLC52A2Q9HAB3 445 aa16.77■□□□□ 0.28
ACTN1-206ENST00000544964 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
ACTN1-206ENST00000544964 RFC4P35249 363 aa16.76■□□□□ 0.27
ACTN1-206ENST00000544964 LGR6Q9HBX8 967 aa16.76■□□□□ 0.27
ACTN1-206ENST00000544964 INTS5Q6P9B9 1019 aaKnown RBP16.75■□□□□ 0.27
ACTN1-206ENST00000544964 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
ACTN1-206ENST00000544964 AFDNP55196 1824 aaKnown RBP16.75■□□□□ 0.27
ACTN1-206ENST00000544964 NRXN2Q9P2S2 1712 aa16.74■□□□□ 0.27
ACTN1-206ENST00000544964 RNMTO43148 476 aaKnown RBP16.74■□□□□ 0.27
ACTN1-206ENST00000544964 TGFB2P61812 414 aa16.74■□□□□ 0.27
ACTN1-206ENST00000544964 MTHFSDQ2M296 383 aaKnown RBP16.74■□□□□ 0.27
ACTN1-206ENST00000544964 DIAPH1O60610 1272 aaKnown RBP16.73■□□□□ 0.27
ACTN1-206ENST00000544964 DDR1Q08345 913 aa16.73■□□□□ 0.27
ACTN1-206ENST00000544964 FKBP8Q14318 412 aa16.73■□□□□ 0.27
ACTN1-206ENST00000544964 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
ACTN1-206ENST00000544964 CCDC87Q9NVE4 849 aa16.73■□□□□ 0.27
ACTN1-206ENST00000544964 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-206ENST00000544964 DLEC1Q9Y238 1755 aa16.72■□□□□ 0.27
ACTN1-206ENST00000544964 A0A0G2JLW4 131 aa16.72■□□□□ 0.27
ACTN1-206ENST00000544964 DPEP1P16444 411 aa16.72■□□□□ 0.27
ACTN1-206ENST00000544964 SLC39A6Q13433 755 aa16.72■□□□□ 0.27
ACTN1-206ENST00000544964 GPBP1L1Q9HC44 474 aaPredicted RBP16.72■□□□□ 0.27
ACTN1-206ENST00000544964 PARP3Q9Y6F1 533 aa16.72■□□□□ 0.27
ACTN1-206ENST00000544964 PPP2R1AP30153 589 aa16.71■□□□□ 0.27
ACTN1-206ENST00000544964 RALBP1Q15311 655 aa16.71■□□□□ 0.27
ACTN1-206ENST00000544964 ZNF526Q8TF50 670 aaPredicted RBP16.71■□□□□ 0.27
ACTN1-206ENST00000544964 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
ACTN1-206ENST00000544964 CYP19A1P11511 503 aaPredicted RBP16.7■□□□□ 0.26
ACTN1-206ENST00000544964 KCNA3P22001 575 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms