RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 DNAJC5GQ8N7S2 189 aa20.34■□□□□ 0.85
COPS7A-220ENST00000544725 KIF20BQ96Q89 1820 aa20.33■□□□□ 0.85
COPS7A-220ENST00000544725 A0A0G2JLW4 131 aa20.33■□□□□ 0.85
COPS7A-220ENST00000544725 PPM1GO15355 546 aaPredicted RBP20.33■□□□□ 0.85
COPS7A-220ENST00000544725 TRAPPC3LQ5T215 181 aa20.33■□□□□ 0.85
COPS7A-220ENST00000544725 ARHGAP27Q6ZUM4 889 aa20.33■□□□□ 0.85
COPS7A-220ENST00000544725 ATG3Q9NT62 314 aa20.33■□□□□ 0.85
COPS7A-220ENST00000544725 RTCBQ9Y3I0 505 aaKnown RBP20.33■□□□□ 0.85
COPS7A-220ENST00000544725 PHKG2P15735 406 aa20.32■□□□□ 0.84
COPS7A-220ENST00000544725 C10orf71Q711Q0 1435 aa20.31■□□□□ 0.84
COPS7A-220ENST00000544725 EYA1Q99502 592 aa20.31■□□□□ 0.84
COPS7A-220ENST00000544725 NMRK2Q9NPI5 230 aa20.31■□□□□ 0.84
COPS7A-220ENST00000544725 CCDC87Q9NVE4 849 aa20.31■□□□□ 0.84
COPS7A-220ENST00000544725 WASHC2AQ641Q2 1341 aa20.3■□□□□ 0.84
COPS7A-220ENST00000544725 KIF13BQ9NQT8 1826 aa20.3■□□□□ 0.84
COPS7A-220ENST00000544725 FCHSD2O94868 740 aa20.3■□□□□ 0.84
COPS7A-220ENST00000544725 ADRA2BP18089 450 aa20.3■□□□□ 0.84
COPS7A-220ENST00000544725 DPEP1P16444 411 aa20.29■□□□□ 0.84
COPS7A-220ENST00000544725 C16orf71Q8IYS4 520 aaPredicted RBP20.29■□□□□ 0.84
COPS7A-220ENST00000544725 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
COPS7A-220ENST00000544725 KIAA1551Q9HCM1 1747 aa20.28■□□□□ 0.84
COPS7A-220ENST00000544725 RC3H1Q5TC82 1133 aaKnown RBP20.28■□□□□ 0.84
COPS7A-220ENST00000544725 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
COPS7A-220ENST00000544725 N4BP2Q86UW6 1770 aaPredicted RBP20.27■□□□□ 0.84
COPS7A-220ENST00000544725 KDRP35968 1356 aa20.27■□□□□ 0.84
COPS7A-220ENST00000544725 ARHGEF1Q92888 912 aaKnown RBP20.27■□□□□ 0.84
COPS7A-220ENST00000544725 PARP3Q9Y6F1 533 aa20.27■□□□□ 0.84
COPS7A-220ENST00000544725 PLEKHG2Q9H7P9 1386 aa20.26■□□□□ 0.83
COPS7A-220ENST00000544725 GYS1P13807 737 aa20.26■□□□□ 0.83
COPS7A-220ENST00000544725 RFC4P35249 363 aa20.26■□□□□ 0.83
COPS7A-220ENST00000544725 C9orf131Q5VYM1 1079 aa20.26■□□□□ 0.83
COPS7A-220ENST00000544725 RBM42Q9BTD8 480 aaKnown RBP20.26■□□□□ 0.83
COPS7A-220ENST00000544725 CNTNAP4Q9C0A0 1308 aa20.25■□□□□ 0.83
COPS7A-220ENST00000544725 ERVV-2B6SEH9 535 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 RPS6KA4O75676 772 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 FSTL1Q12841 308 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 KLRG1Q96E93 195 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 C4AP0C0L4 1744 aa20.24■□□□□ 0.83
COPS7A-220ENST00000544725 PIM2Q9P1W9 311 aa20.23■□□□□ 0.83
COPS7A-220ENST00000544725 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
COPS7A-220ENST00000544725 KDM2BQ8NHM5 1336 aa20.23■□□□□ 0.83
COPS7A-220ENST00000544725 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
COPS7A-220ENST00000544725 HSP90AB1P08238 724 aaKnown RBP20.22■□□□□ 0.83
COPS7A-220ENST00000544725 KCNA3P22001 575 aa20.22■□□□□ 0.83
COPS7A-220ENST00000544725 POLKQ9UBT6 870 aa20.22■□□□□ 0.83
COPS7A-220ENST00000544725 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
COPS7A-220ENST00000544725 DCAF5Q96JK2 942 aa20.21■□□□□ 0.83
COPS7A-220ENST00000544725 ZNF831Q5JPB2 1677 aa20.21■□□□□ 0.83
COPS7A-220ENST00000544725 EIF4A2Q14240 407 aaKnown RBP20.2■□□□□ 0.82
COPS7A-220ENST00000544725 DALRD3Q5D0E6 543 aaKnown RBP20.2■□□□□ 0.82
COPS7A-220ENST00000544725 HTRA3P83110 453 aa20.19■□□□□ 0.82
COPS7A-220ENST00000544725 BRCA1P38398 1863 aaKnown RBP20.18■□□□□ 0.82
COPS7A-220ENST00000544725 PLEKHO1Q53GL0 409 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-220ENST00000544725 COL13A1Q5TAT6 717 aaPredicted RBP20.18■□□□□ 0.82
COPS7A-220ENST00000544725 RNF181Q9P0P0 153 aa20.18■□□□□ 0.82
COPS7A-220ENST00000544725 KCPQ6ZWJ8 1503 aa20.17■□□□□ 0.82
COPS7A-220ENST00000544725 CABP4P57796 275 aa20.17■□□□□ 0.82
COPS7A-220ENST00000544725 COL5A3P25940 1745 aaPredicted RBP20.16■□□□□ 0.82
COPS7A-220ENST00000544725 ARFGEF1Q9Y6D6 1849 aa20.16■□□□□ 0.82
COPS7A-220ENST00000544725 RRAGCQ9HB90 399 aa20.16■□□□□ 0.82
COPS7A-220ENST00000544725 PCNTO95613 3336 aa20.16■□□□□ 0.82
COPS7A-220ENST00000544725 USP42Q9H9J4 1324 aaKnown RBP20.14■□□□□ 0.81
COPS7A-220ENST00000544725 PTCD1O75127 700 aaKnown RBP20.14■□□□□ 0.81
COPS7A-220ENST00000544725 CRKLP46109 303 aaKnown RBP20.14■□□□□ 0.81
COPS7A-220ENST00000544725 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
COPS7A-220ENST00000544725 ZNF530Q6P9A1 599 aaPredicted RBP20.14■□□□□ 0.81
COPS7A-220ENST00000544725 SMC1BQ8NDV3 1235 aa20.14■□□□□ 0.81
COPS7A-220ENST00000544725 SRP68Q9UHB9 627 aaKnown RBP20.14■□□□□ 0.81
COPS7A-220ENST00000544725 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
COPS7A-220ENST00000544725 DDR1Q08345 913 aa20.13■□□□□ 0.81
COPS7A-220ENST00000544725 FKBP8Q14318 412 aa20.13■□□□□ 0.81
COPS7A-220ENST00000544725 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
COPS7A-220ENST00000544725 CHRNA5P30532 468 aa20.12■□□□□ 0.81
COPS7A-220ENST00000544725 TNS4Q8IZW8 715 aa20.12■□□□□ 0.81
COPS7A-220ENST00000544725 ZC3H4Q9UPT8 1303 aaKnown RBP20.11■□□□□ 0.81
COPS7A-220ENST00000544725 CAPN15O75808 1086 aa20.11■□□□□ 0.81
COPS7A-220ENST00000544725 MTHFSP49914 203 aa20.11■□□□□ 0.81
COPS7A-220ENST00000544725 C1orf141Q5JVX7 400 aa20.11■□□□□ 0.81
COPS7A-220ENST00000544725 MYH14Q7Z406 1995 aaKnown RBP20.11■□□□□ 0.81
COPS7A-220ENST00000544725 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
COPS7A-220ENST00000544725 POLRMTO00411 1230 aaKnown RBP20.09■□□□□ 0.81
COPS7A-220ENST00000544725 NFATC2IPQ8NCF5 419 aa20.09■□□□□ 0.81
COPS7A-220ENST00000544725 ZPR1O75312 459 aa20.08■□□□□ 0.81
COPS7A-220ENST00000544725 TM4SF1P30408 202 aa20.08■□□□□ 0.81
COPS7A-220ENST00000544725 PRELPP51888 382 aa20.07■□□□□ 0.8
COPS7A-220ENST00000544725 INTS5Q6P9B9 1019 aaKnown RBP20.06■□□□□ 0.8
COPS7A-220ENST00000544725 VEGFAP15692 232 aaPredicted RBP20.05■□□□□ 0.8
COPS7A-220ENST00000544725 LMNB1P20700 586 aa20.05■□□□□ 0.8
COPS7A-220ENST00000544725 RASSF7Q02833 373 aa20.05■□□□□ 0.8
COPS7A-220ENST00000544725 USPL1Q5W0Q7 1092 aa20.05■□□□□ 0.8
COPS7A-220ENST00000544725 GLTPD2A6NH11 291 aa20.04■□□□□ 0.8
COPS7A-220ENST00000544725 POLR3GLQ9BT43 218 aa20.04■□□□□ 0.8
COPS7A-220ENST00000544725 SBF1O95248 1867 aa20.03■□□□□ 0.8
COPS7A-220ENST00000544725 AEBP1Q8IUX7 1158 aa20.03■□□□□ 0.8
COPS7A-220ENST00000544725 HSPA1AP0DMV8 641 aaKnown RBP20.02■□□□□ 0.8
COPS7A-220ENST00000544725 HSPA1BP0DMV9 641 aaKnown RBP20.02■□□□□ 0.8
COPS7A-220ENST00000544725 TJP1Q07157 1748 aa20.02■□□□□ 0.79
COPS7A-220ENST00000544725 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.79
COPS7A-220ENST00000544725 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms