RNA–Protein interactions for RNA: ENST00000544658.5

CDK2AP1-206, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 2 BASIC

Gene CDK2AP1, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-206ENST00000544658 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
CDK2AP1-206ENST00000544658 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.41
CDK2AP1-206ENST00000544658 SCN11AQ9UI33 1791 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 SBF2Q86WG5 1849 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 MCM10Q7L590 875 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 ADAMTS7Q9UKP4 1686 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 ITGB4P16144 1822 aa12.51□□□□□ -0.41
CDK2AP1-206ENST00000544658 RIPK4P57078 832 aa12.5□□□□□ -0.41
CDK2AP1-206ENST00000544658 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
CDK2AP1-206ENST00000544658 KRT27Q7Z3Y8 459 aa12.5□□□□□ -0.41
CDK2AP1-206ENST00000544658 DOT1LQ8TEK3 1739 aa12.5□□□□□ -0.41
CDK2AP1-206ENST00000544658 EP400Q96L91 3159 aa12.5□□□□□ -0.41
CDK2AP1-206ENST00000544658 PCDH11XQ9BZA7 1347 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 PCDH11YQ9BZA8 1340 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 MAPK8IP3Q9UPT6 1336 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 KCNQ2O43526 872 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 NKX1-1Q15270 411 aaPredicted RBP12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 AKAP4Q5JQC9 854 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 IFNL2Q8IZJ0 200 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
CDK2AP1-206ENST00000544658 SIPA1L3O60292 1781 aaPredicted RBP12.48□□□□□ -0.41
CDK2AP1-206ENST00000544658 MAP3K5Q99683 1374 aa12.48□□□□□ -0.41
CDK2AP1-206ENST00000544658 RNMTO43148 476 aaKnown RBP12.48□□□□□ -0.41
CDK2AP1-206ENST00000544658 PDE3BQ13370 1112 aa12.48□□□□□ -0.41
CDK2AP1-206ENST00000544658 GAS2L2Q8NHY3 880 aa12.48□□□□□ -0.41
CDK2AP1-206ENST00000544658 GNAT3A8MTJ3 354 aa12.47□□□□□ -0.41
CDK2AP1-206ENST00000544658 PLEKHG2Q9H7P9 1386 aa12.46□□□□□ -0.41
CDK2AP1-206ENST00000544658 KCNQ3O43525 872 aa12.46□□□□□ -0.41
CDK2AP1-206ENST00000544658 PRIM1P49642 420 aaKnown RBP12.46□□□□□ -0.41
CDK2AP1-206ENST00000544658 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
CDK2AP1-206ENST00000544658 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
CDK2AP1-206ENST00000544658 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
CDK2AP1-206ENST00000544658 ZNF521Q96K83 1311 aa12.45□□□□□ -0.42
CDK2AP1-206ENST00000544658 C1orf141Q5JVX7 400 aa12.45□□□□□ -0.42
CDK2AP1-206ENST00000544658 WWC1Q8IX03 1113 aa12.45□□□□□ -0.42
CDK2AP1-206ENST00000544658 YTHDC1Q96MU7 727 aaKnown RBP12.45□□□□□ -0.42
CDK2AP1-206ENST00000544658 HNRNPUQ00839 825 aaKnown RBP eCLIP12.44□□□□□ -0.42
CDK2AP1-206ENST00000544658 NFATC2IPQ8NCF5 419 aa12.44□□□□□ -0.42
CDK2AP1-206ENST00000544658 PIGBQ92521 554 aa12.44□□□□□ -0.42
CDK2AP1-206ENST00000544658 BTAF1O14981 1849 aa12.44□□□□□ -0.42
CDK2AP1-206ENST00000544658 NHSQ6T4R5 1651 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 MRC1P22897 1456 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 SLC39A6Q13433 755 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 CDCA7LQ96GN5 454 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 DCAF5Q96JK2 942 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 BCL9O00512 1426 aa12.43□□□□□ -0.42
CDK2AP1-206ENST00000544658 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
CDK2AP1-206ENST00000544658 TRIM37O94972 964 aa12.42□□□□□ -0.42
CDK2AP1-206ENST00000544658 NEFMP07197 916 aa12.42□□□□□ -0.42
CDK2AP1-206ENST00000544658 CCDC27Q2M243 656 aa12.42□□□□□ -0.42
CDK2AP1-206ENST00000544658 ZNF853P0CG23 659 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 LHX8Q68G74 356 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 FAM196AQ6ZSG2 479 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 SYTL4Q96C24 671 aaPredicted RBP12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 TNS1Q9HBL0 1735 aaKnown RBP12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
CDK2AP1-206ENST00000544658 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 ERVV-2B6SEH9 535 aa12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 HSP90AB1P08238 724 aaKnown RBP12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 CABP4P57796 275 aa12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 RTF1Q92541 710 aaKnown RBP12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
CDK2AP1-206ENST00000544658 CD44P16070 742 aaKnown RBP12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 KCNQ4P56696 695 aa12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 SLC4A9Q96Q91 983 aa12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 LAS1LQ9Y4W2 734 aaKnown RBP12.39□□□□□ -0.43
CDK2AP1-206ENST00000544658 PRAMEF22A3QJZ6 481 aa12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 CHL1O00533 1208 aa12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 UBR2Q8IWV8 1755 aa12.38□□□□□ -0.43
CDK2AP1-206ENST00000544658 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 POTEIP0CG38 1075 aa12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 TEFQ10587 303 aa12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 PROM2Q8N271 834 aa12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 BCL11BQ9C0K0 894 aaPredicted RBP12.37□□□□□ -0.43
CDK2AP1-206ENST00000544658 BTBD11A6QL63 1104 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 SLFN5Q08AF3 891 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 LMOD3Q0VAK6 560 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 TRMT2AQ8IZ69 625 aaKnown RBP12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 UPF1Q92900 1129 aaKnown RBP eCLIP12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 LY75O60449 1722 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 ZBED9Q6R2W3 1325 aa12.36□□□□□ -0.43
CDK2AP1-206ENST00000544658 C5P01031 1676 aa12.35□□□□□ -0.43
CDK2AP1-206ENST00000544658 DEFB132Q7Z7B7 95 aa12.35□□□□□ -0.43
CDK2AP1-206ENST00000544658 ZNF496Q96IT1 587 aaPredicted RBP12.35□□□□□ -0.43
CDK2AP1-206ENST00000544658 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
CDK2AP1-206ENST00000544658 FANCIQ9NVI1 1328 aa12.35□□□□□ -0.43
CDK2AP1-206ENST00000544658 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
CDK2AP1-206ENST00000544658 EIF4A1P60842 406 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms