RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ZCRB1Q8TBF4 217 aaKnown RBP9.02□□□□□ -0.97
CDCA3-209ENST00000544610 SYTL4Q96C24 671 aaPredicted RBP9.02□□□□□ -0.97
CDCA3-209ENST00000544610 FBLN1P23142 703 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 POLD1P28340 1107 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 KCNQ4P56696 695 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 TFCP2L1Q9NZI6 479 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 FARP1Q9Y4F1 1045 aaPredicted RBP9.01□□□□□ -0.97
CDCA3-209ENST00000544610 RGPD2P0DJD1 1756 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 CGNL1Q0VF96 1302 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 KIF7Q2M1P5 1343 aa9.01□□□□□ -0.97
CDCA3-209ENST00000544610 CHD4Q14839 1912 aa9□□□□□ -0.97
CDCA3-209ENST00000544610 SMG6Q86US8 1419 aaKnown RBP9□□□□□ -0.97
CDCA3-209ENST00000544610 GPR162Q16538 588 aa9□□□□□ -0.97
CDCA3-209ENST00000544610 MAMSTRQ6ZN01 415 aa9□□□□□ -0.97
CDCA3-209ENST00000544610 SPRYD3Q8NCJ5 442 aa9□□□□□ -0.97
CDCA3-209ENST00000544610 CCNL1Q9UK58 526 aaPredicted RBP9□□□□□ -0.97
CDCA3-209ENST00000544610 FYB1O15117 783 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 RRS1Q15050 365 aaKnown RBP8.99□□□□□ -0.97
CDCA3-209ENST00000544610 NBPF6Q5VWK0 638 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 DIEXFQ68CQ4 756 aaKnown RBP8.99□□□□□ -0.97
CDCA3-209ENST00000544610 NLGN2Q8NFZ4 835 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 NBPF4Q96M43 638 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 INSRP06213 1382 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 FLT4P35916 1363 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 KIF24Q5T7B8 1368 aa8.99□□□□□ -0.97
CDCA3-209ENST00000544610 C5P01031 1676 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 C1QTNF8P60827 252 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 PLCD3Q8N3E9 789 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 USHBP1Q8N6Y0 703 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 RAPGEF4Q8WZA2 1011 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 GGNBP2Q9H3C7 697 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 PCDH11XQ9BZA7 1347 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 PCDH11YQ9BZA8 1340 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 KIF20BQ96Q89 1820 aa8.98□□□□□ -0.97
CDCA3-209ENST00000544610 RGL2O15211 777 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 TATP17735 454 aaPredicted RBP8.97□□□□□ -0.97
CDCA3-209ENST00000544610 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
CDCA3-209ENST00000544610 CDAN1Q8IWY9 1227 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 NPC1L1Q9UHC9 1359 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 PKD1L3Q7Z443 1732 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 TOGARAM1Q9Y4F4 1720 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 NCAPD2Q15021 1401 aa8.97□□□□□ -0.97
CDCA3-209ENST00000544610 SENP3-EIF4A1A0A087X0R7 540 aa8.96□□□□□ -0.98
CDCA3-209ENST00000544610 HSP90AB2PQ58FF8 381 aa8.96□□□□□ -0.98
CDCA3-209ENST00000544610 PELP1Q8IZL8 1130 aaKnown RBP8.96□□□□□ -0.98
CDCA3-209ENST00000544610 TSHZ2Q9NRE2 1034 aa8.96□□□□□ -0.98
CDCA3-209ENST00000544610 PALLDQ8WX93 1383 aa8.96□□□□□ -0.98
CDCA3-209ENST00000544610 C4BP0C0L5 1744 aa8.95□□□□□ -0.98
CDCA3-209ENST00000544610 ANKRD26Q9UPS8 1709 aa8.95□□□□□ -0.98
CDCA3-209ENST00000544610 GALR2O43603 387 aaPredicted RBP8.95□□□□□ -0.98
CDCA3-209ENST00000544610 YBX3P16989 372 aaKnown RBP eCLIP8.95□□□□□ -0.98
CDCA3-209ENST00000544610 HMGB2P26583 209 aaKnown RBP8.95□□□□□ -0.98
CDCA3-209ENST00000544610 SSUH2Q9Y2M2 353 aa8.95□□□□□ -0.98
CDCA3-209ENST00000544610 TAF1LQ8IZX4 1826 aa8.94□□□□□ -0.98
CDCA3-209ENST00000544610 CYP27B1O15528 508 aa8.94□□□□□ -0.98
CDCA3-209ENST00000544610 GRIN3BO60391 1043 aa8.94□□□□□ -0.98
CDCA3-209ENST00000544610 GIGYF1O75420 1035 aaPredicted RBP8.94□□□□□ -0.98
CDCA3-209ENST00000544610 MSL1Q68DK7 614 aa8.94□□□□□ -0.98
CDCA3-209ENST00000544610 FLAD1Q8NFF5 587 aa8.94□□□□□ -0.98
CDCA3-209ENST00000544610 DDX10Q13206 875 aaKnown RBP8.93□□□□□ -0.98
CDCA3-209ENST00000544610 MPRIPQ6WCQ1 1025 aa8.93□□□□□ -0.98
CDCA3-209ENST00000544610 CARD14Q9BXL6 1004 aa8.93□□□□□ -0.98
CDCA3-209ENST00000544610 CD2APQ9Y5K6 639 aa8.93□□□□□ -0.98
CDCA3-209ENST00000544610 NSD3Q9BZ95 1437 aa8.93□□□□□ -0.98
CDCA3-209ENST00000544610 KAT6BQ8WYB5 2073 aa8.92□□□□□ -0.98
CDCA3-209ENST00000544610 PER1O15534 1290 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-209ENST00000544610 NKX1-1Q15270 411 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-209ENST00000544610 SMARCC1Q92922 1105 aaPredicted RBP8.92□□□□□ -0.98
CDCA3-209ENST00000544610 EMILIN1Q9Y6C2 1016 aa8.92□□□□□ -0.98
CDCA3-209ENST00000544610 CEP350Q5VT06 3117 aa8.92□□□□□ -0.98
CDCA3-209ENST00000544610 ITGB4P16144 1822 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 ATP10DQ9P241 1426 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 ADCY9O60503 1353 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 NBR1Q14596 966 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 AMIGO3Q86WK7 504 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 PIGBQ92521 554 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 AK7Q96M32 723 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 UBR3Q6ZT12 1888 aa8.91□□□□□ -0.98
CDCA3-209ENST00000544610 MAP2P11137 1827 aaKnown RBP8.91□□□□□ -0.98
CDCA3-209ENST00000544610 PLEKHG2Q9H7P9 1386 aa8.9□□□□□ -0.98
CDCA3-209ENST00000544610 CCER2I3L3R5 266 aa8.9□□□□□ -0.98
CDCA3-209ENST00000544610 ANP32CO43423 234 aa8.9□□□□□ -0.98
CDCA3-209ENST00000544610 SSFA2P28290 1259 aa8.9□□□□□ -0.98
CDCA3-209ENST00000544610 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.9□□□□□ -0.98
CDCA3-209ENST00000544610 SPG7Q9UQ90 795 aa8.9□□□□□ -0.98
CDCA3-209ENST00000544610 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.89□□□□□ -0.99
CDCA3-209ENST00000544610 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
CDCA3-209ENST00000544610 SIK1P57059 783 aa8.89□□□□□ -0.99
CDCA3-209ENST00000544610 RALBP1Q15311 655 aa8.89□□□□□ -0.99
CDCA3-209ENST00000544610 CICQ96RK0 1608 aaPredicted RBP8.88□□□□□ -0.99
CDCA3-209ENST00000544610 IGSF1Q8N6C5 1336 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 PPM1GO15355 546 aaPredicted RBP8.88□□□□□ -0.99
CDCA3-209ENST00000544610 PHF14O94880 888 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 PHKG2P15735 406 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 SMIM5Q71RC9 77 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 MIER1Q8N108 512 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 LINC00116Q8NCU8 138 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 EYA1Q99502 592 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 PANK3Q9H999 370 aa8.88□□□□□ -0.99
CDCA3-209ENST00000544610 SCUBE2Q9NQ36 999 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 226.8 ms