RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 ERVV-2B6SEH9 535 aa14.52□□□□□ -0.09
CHEK1-218ENST00000544373 LINC00116Q8NCU8 138 aa14.52□□□□□ -0.09
CHEK1-218ENST00000544373 NPC1L1Q9UHC9 1359 aa14.51□□□□□ -0.09
CHEK1-218ENST00000544373 MSL1Q68DK7 614 aa14.51□□□□□ -0.09
CHEK1-218ENST00000544373 SLC4A9Q96Q91 983 aa14.51□□□□□ -0.09
CHEK1-218ENST00000544373 ITGB4P16144 1822 aa14.51□□□□□ -0.09
CHEK1-218ENST00000544373 DIAPH1O60610 1272 aaKnown RBP14.5□□□□□ -0.09
CHEK1-218ENST00000544373 HSP90AB1P08238 724 aaKnown RBP14.5□□□□□ -0.09
CHEK1-218ENST00000544373 ATP6V1AP38606 617 aa14.5□□□□□ -0.09
CHEK1-218ENST00000544373 CABP4P57796 275 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 C1orf141Q5JVX7 400 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 TUBGCP6Q96RT7 1819 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 PHF14O94880 888 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 POLD1P28340 1107 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 NFATC2IPQ8NCF5 419 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 AK7Q96M32 723 aa14.49□□□□□ -0.09
CHEK1-218ENST00000544373 KLHL34Q8N239 644 aa14.48□□□□□ -0.09
CHEK1-218ENST00000544373 LGR6Q9HBX8 967 aa14.48□□□□□ -0.09
CHEK1-218ENST00000544373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.47□□□□□ -0.09
CHEK1-218ENST00000544373 RBM42Q9BTD8 480 aaKnown RBP14.47□□□□□ -0.09
CHEK1-218ENST00000544373 C5P01031 1676 aa14.47□□□□□ -0.09
CHEK1-218ENST00000544373 U2SURPO15042 1029 aaKnown RBP14.46□□□□□ -0.09
CHEK1-218ENST00000544373 MTHFSDQ2M296 383 aaKnown RBP14.46□□□□□ -0.09
CHEK1-218ENST00000544373 COL3A1P02461 1466 aaPredicted RBP14.46□□□□□ -0.09
CHEK1-218ENST00000544373 QSER1Q2KHR3 1735 aa14.46□□□□□ -0.09
CHEK1-218ENST00000544373 GNPATO15228 680 aa14.46□□□□□ -0.1
CHEK1-218ENST00000544373 AKAP4Q5JQC9 854 aa14.46□□□□□ -0.1
CHEK1-218ENST00000544373 FLAD1Q8NFF5 587 aa14.46□□□□□ -0.1
CHEK1-218ENST00000544373 C4BP0C0L5 1744 aa14.45□□□□□ -0.1
CHEK1-218ENST00000544373 MAP3K5Q99683 1374 aa14.45□□□□□ -0.1
CHEK1-218ENST00000544373 PTCD1O75127 700 aaKnown RBP14.45□□□□□ -0.1
CHEK1-218ENST00000544373 NLGN2Q8NFZ4 835 aa14.45□□□□□ -0.1
CHEK1-218ENST00000544373 HMGB2P26583 209 aaKnown RBP14.44□□□□□ -0.1
CHEK1-218ENST00000544373 TAF1LQ8IZX4 1826 aa14.43□□□□□ -0.1
CHEK1-218ENST00000544373 PPP2R1AP30153 589 aa14.43□□□□□ -0.1
CHEK1-218ENST00000544373 RNMTO43148 476 aaKnown RBP14.42□□□□□ -0.1
CHEK1-218ENST00000544373 YY1P25490 414 aa14.42□□□□□ -0.1
CHEK1-218ENST00000544373 SSFA2P28290 1259 aa14.42□□□□□ -0.1
CHEK1-218ENST00000544373 SLC52A2Q9HAB3 445 aa14.42□□□□□ -0.1
CHEK1-218ENST00000544373 COL24A1Q17RW2 1714 aa14.41□□□□□ -0.1
CHEK1-218ENST00000544373 SLC39A6Q13433 755 aa14.41□□□□□ -0.1
CHEK1-218ENST00000544373 PHACTR3Q96KR7 559 aa14.41□□□□□ -0.1
CHEK1-218ENST00000544373 RC3H1Q5TC82 1133 aaKnown RBP14.39□□□□□ -0.11
CHEK1-218ENST00000544373 RTCBQ9Y3I0 505 aaKnown RBP14.39□□□□□ -0.11
CHEK1-218ENST00000544373 GPR162Q16538 588 aa14.39□□□□□ -0.11
CHEK1-218ENST00000544373 TRAPPC3LQ5T215 181 aa14.39□□□□□ -0.11
CHEK1-218ENST00000544373 IL17REQ8NFR9 667 aa14.39□□□□□ -0.11
CHEK1-218ENST00000544373 ARHGEF1Q92888 912 aaKnown RBP14.39□□□□□ -0.11
CHEK1-218ENST00000544373 CFAP53Q96M91 514 aa14.39□□□□□ -0.11
CHEK1-218ENST00000544373 CNTNAP4Q9C0A0 1308 aa14.39□□□□□ -0.11
CHEK1-218ENST00000544373 UBR3Q6ZT12 1888 aa14.38□□□□□ -0.11
CHEK1-218ENST00000544373 PRKAR2BP31323 418 aa14.38□□□□□ -0.11
CHEK1-218ENST00000544373 CRKLP46109 303 aaKnown RBP14.38□□□□□ -0.11
CHEK1-218ENST00000544373 PELP1Q8IZL8 1130 aaKnown RBP14.38□□□□□ -0.11
CHEK1-218ENST00000544373 RSPH6AQ9H0K4 717 aa14.38□□□□□ -0.11
CHEK1-218ENST00000544373 RPS6KA4O75676 772 aa14.37□□□□□ -0.11
CHEK1-218ENST00000544373 DNAJC10Q8IXB1 793 aa14.37□□□□□ -0.11
CHEK1-218ENST00000544373 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
CHEK1-218ENST00000544373 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.118e-7■□□□□ 8.6
CHEK1-218ENST00000544373 INTS5Q6P9B9 1019 aaKnown RBP14.36□□□□□ -0.11
CHEK1-218ENST00000544373 GNAT3A8MTJ3 354 aa14.36□□□□□ -0.11
CHEK1-218ENST00000544373 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
CHEK1-218ENST00000544373 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.11
CHEK1-218ENST00000544373 GAS2L2Q8NHY3 880 aa14.36□□□□□ -0.11
CHEK1-218ENST00000544373 CD2APQ9Y5K6 639 aa14.36□□□□□ -0.11
CHEK1-218ENST00000544373 MRC1P22897 1456 aa14.35□□□□□ -0.11
CHEK1-218ENST00000544373 MMP10P09238 476 aa14.35□□□□□ -0.11
CHEK1-218ENST00000544373 GYS1P13807 737 aa14.35□□□□□ -0.11
CHEK1-218ENST00000544373 NUDCQ9Y266 331 aa14.35□□□□□ -0.11
CHEK1-218ENST00000544373 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
CHEK1-218ENST00000544373 SRP68Q9UHB9 627 aaKnown RBP14.34□□□□□ -0.11
CHEK1-218ENST00000544373 ZNF831Q5JPB2 1677 aa14.33□□□□□ -0.11
CHEK1-218ENST00000544373 CYP19A1P11511 503 aaPredicted RBP14.33□□□□□ -0.11
CHEK1-218ENST00000544373 RFC4P35249 363 aa14.33□□□□□ -0.11
CHEK1-218ENST00000544373 WWC3Q9ULE0 1092 aa14.33□□□□□ -0.11
CHEK1-218ENST00000544373 C1QBPQ07021 282 aaKnown RBP14.33□□□□□ -0.12
CHEK1-218ENST00000544373 NLGN1Q8N2Q7 840 aa14.33□□□□□ -0.12
CHEK1-218ENST00000544373 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.12
CHEK1-218ENST00000544373 MYH14Q7Z406 1995 aaKnown RBP14.32□□□□□ -0.12
CHEK1-218ENST00000544373 ADAMTS7Q9UKP4 1686 aa14.32□□□□□ -0.12
CHEK1-218ENST00000544373 COL5A3P25940 1745 aaPredicted RBP14.32□□□□□ -0.12
CHEK1-218ENST00000544373 FCHSD2O94868 740 aa14.32□□□□□ -0.12
CHEK1-218ENST00000544373 TEFQ10587 303 aa14.32□□□□□ -0.12
CHEK1-218ENST00000544373 CCDC87Q9NVE4 849 aa14.32□□□□□ -0.12
CHEK1-218ENST00000544373 KCNQ3O43525 872 aa14.31□□□□□ -0.12
CHEK1-218ENST00000544373 DDX10Q13206 875 aaKnown RBP14.31□□□□□ -0.12
CHEK1-218ENST00000544373 FKBP8Q14318 412 aa14.31□□□□□ -0.12
CHEK1-218ENST00000544373 ZNF496Q96IT1 587 aaPredicted RBP14.31□□□□□ -0.12
CHEK1-218ENST00000544373 TJP1Q07157 1748 aa14.31□□□□□ -0.12
CHEK1-218ENST00000544373 ZNF790Q6PG37 636 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 MCM10Q7L590 875 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 TTC5Q8N0Z6 440 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 ZBTB1Q9Y2K1 713 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 CEMIPQ8WUJ3 1361 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 VSIG10Q8N0Z9 540 aa14.3□□□□□ -0.12
CHEK1-218ENST00000544373 ZNF784Q8NCA9 323 aaPredicted RBP14.3□□□□□ -0.12
CHEK1-218ENST00000544373 SOS1Q07889 1333 aaPredicted RBP14.29□□□□□ -0.12
CHEK1-218ENST00000544373 USP42Q9H9J4 1324 aaKnown RBP14.29□□□□□ -0.12
CHEK1-218ENST00000544373 CANXP27824 592 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms