RNA–Protein interactions for RNA: ENST00000544154.1

NPIPB3-213, Transcript of nuclear pore complex interacting protein family member B3, human

TSL 5

Gene NPIPB3, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB3-213	ENST00000544154	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	SPATA31C2	B4DYI2	1134 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	CFAP99	D6REC4	459 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	PRRG2	O14669	202 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	BNIP3L	O60238	219 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	NRG1	Q02297	640 aa	Predicted RBP	4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	NUTM1	Q86Y26	1132 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	CARD14	Q9BXL6	1004 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	GRIP2	Q9C0E4	1043 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	HCN2	Q9UL51	889 aa		4.24	□□□□□ -1.73
NPIPB3-213	ENST00000544154	C9orf172	C9J069	976 aa		4.23	□□□□□ -1.73
NPIPB3-213	ENST00000544154	PER1	O15534	1290 aa	Predicted RBP	4.23	□□□□□ -1.73
NPIPB3-213	ENST00000544154	WDR44	Q5JSH3	913 aa		4.23	□□□□□ -1.73
NPIPB3-213	ENST00000544154	TIMMDC1	Q9NPL8	285 aa		4.23	□□□□□ -1.73
NPIPB3-213	ENST00000544154	ADGRE2	Q9UHX3	823 aa		4.23	□□□□□ -1.73
NPIPB3-213	ENST00000544154	BUD31	P41223	144 aa	Predicted RBP	4.22	□□□□□ -1.73
NPIPB3-213	ENST00000544154	MDM2	Q00987	491 aa	Predicted RBP	4.21	□□□□□ -1.74
NPIPB3-213	ENST00000544154	TRIM28	Q13263	835 aa	Known RBP	4.21	□□□□□ -1.74
NPIPB3-213	ENST00000544154	GPAM	Q9HCL2	828 aa		4.21	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MOXD2P	A6NHM9	499 aa		4.2	□□□□□ -1.74
NPIPB3-213	ENST00000544154	GPIHBP1	Q8IV16	184 aa		4.2	□□□□□ -1.74
NPIPB3-213	ENST00000544154	ARMC2	Q8NEN0	867 aa		4.2	□□□□□ -1.74
NPIPB3-213	ENST00000544154	ADH6	P28332	368 aa		4.19	□□□□□ -1.74
NPIPB3-213	ENST00000544154	SPIRE2	Q8WWL2	714 aa		4.19	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MDFI	Q99750	246 aa		4.19	□□□□□ -1.74
NPIPB3-213	ENST00000544154	FAM217B	Q9NTX9	383 aa	Predicted RBP	4.19	□□□□□ -1.74
NPIPB3-213	ENST00000544154	LBR	Q14739	615 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-213	ENST00000544154	LENG1	Q96BZ8	264 aa	Predicted RBP	4.18	□□□□□ -1.74
NPIPB3-213	ENST00000544154	CDV3	Q9UKY7	258 aa	Known RBP	4.18	□□□□□ -1.74
NPIPB3-213	ENST00000544154		A0A1W2PRU2	124 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	ERVH48-1	M5A8F1	160 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MEN1	O00255	615 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	WASL	O00401	505 aa	Predicted RBP	4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	IRF6	O14896	467 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MAP2K5	Q13163	448 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154	SHISA2	Q6UWI4	295 aa		4.17	□□□□□ -1.74
NPIPB3-213	ENST00000544154		B8ZZF3	427 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	NID1	P14543	1247 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	SLC27A3	Q5K4L6	730 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	TAS1R3	Q7RTX0	852 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MICALL1	Q8N3F8	863 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	SLC10A4	Q96EP9	437 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	RUBCNL	Q9H714	662 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	AVEN	Q9NQS1	362 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	PRDM6	Q9NQX0	595 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	KDM2A	Q9Y2K7	1162 aa		4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	MINK1	Q8N4C8	1332 aa	Predicted RBP	4.16	□□□□□ -1.74
NPIPB3-213	ENST00000544154	DBX1	A6NMT0	343 aa		4.15	□□□□□ -1.75
NPIPB3-213	ENST00000544154	SPINK2	P20155	84 aa		4.15	□□□□□ -1.75
NPIPB3-213	ENST00000544154	C8orf86	Q6ZUL3	223 aa		4.15	□□□□□ -1.75
NPIPB3-213	ENST00000544154	SLC51A	Q86UW1	340 aa		4.15	□□□□□ -1.75
NPIPB3-213	ENST00000544154	FST	P19883	344 aa		4.14	□□□□□ -1.75
NPIPB3-213	ENST00000544154	LILRA6	Q6PI73	481 aa		4.14	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PRR23C	Q6ZRP0	262 aa		4.14	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ATP5J2-PTCD1	G3V325	749 aa		4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	CLCN1	P35523	988 aa		4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PCBP4	P57723	403 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	KRI1	Q8N9T8	703 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	OCSTAMP	Q9BR26	566 aa		4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	GPCPD1	Q9NPB8	672 aa		4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	DNAAF2	Q9NVR5	837 aa	Known RBP	4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	STARD13	Q9Y3M8	1113 aa		4.13	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ELOA3C	A0A087WX78	387 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154		A0A1B0GTH6	734 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ELOA3D	A6NLF2	546 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154		M0R082	166 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ZNF124	Q15973	351 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ELOA3B	Q3SY89	546 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	FAM182B	Q5T319	152 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ELOA3	Q8NG57	546 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ZNF417	Q8TAU3	575 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ZNF587	Q96SQ5	575 aa	Predicted RBP	4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PCDHB15	Q9Y5E8	787 aa		4.12	□□□□□ -1.75
NPIPB3-213	ENST00000544154	TULP1	O00294	542 aa	Predicted RBP	4.11	□□□□□ -1.75
NPIPB3-213	ENST00000544154	RAB15	P59190	212 aa		4.11	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ARHGAP9	Q9BRR9	750 aa		4.11	□□□□□ -1.75
NPIPB3-213	ENST00000544154	CYLD	Q9NQC7	956 aa		4.11	□□□□□ -1.75
NPIPB3-213	ENST00000544154	TGFB1	P01137	390 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	HRC	P23327	699 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	MSX1	P28360	303 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PHKA2	P46019	1235 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PLCB2	Q00722	1185 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ZNF648	Q5T619	568 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ZNF468	Q5VIY5	522 aa	Predicted RBP	4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154	CCDC102A	Q96A19	550 aa		4.1	□□□□□ -1.75
NPIPB3-213	ENST00000544154		A0A0A0MRY4	1105 aa		4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ALB	P02768	609 aa		4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	SSTR3	P32745	418 aa	Predicted RBP	4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	CLN3	Q13286	438 aa		4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	EFHC2	Q5JST6	749 aa		4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	PDXDC2P	Q6P474	469 aa		4.09	□□□□□ -1.75
NPIPB3-213	ENST00000544154	ESPN	B1AK53	854 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	CSB-PGBD3	P0DP91	1061 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	CD33	P20138	364 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	PGBD3	Q8N328	593 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	MEGF10	Q96KG7	1140 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	NLRP3	Q96P20	1036 aa		4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	ZCCHC2	Q9C0B9	1178 aa	Known RBP	4.08	□□□□□ -1.76
NPIPB3-213	ENST00000544154	GJA5	P36382	358 aa		4.07	□□□□□ -1.76

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