RNA–Protein interactions for RNA: ENST00000544105.5

LDHC-208, Transcript of lactate dehydrogenase C, humanhuman

TSL 5 BASIC

Gene LDHC, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-208ENST00000544105 ASTLQ6HA08 431 aaPredicted RBP13.22□□□□□ -0.29
LDHC-208ENST00000544105 SSH1Q8WYL5 1049 aa13.22□□□□□ -0.29
LDHC-208ENST00000544105 OTUD5Q96G74 571 aa13.22□□□□□ -0.29
LDHC-208ENST00000544105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.22□□□□□ -0.29
LDHC-208ENST00000544105 ELL2O00472 640 aaPredicted RBP13.21□□□□□ -0.29
LDHC-208ENST00000544105 ATMINO43313 823 aaPredicted RBP13.21□□□□□ -0.29
LDHC-208ENST00000544105 C7P10643 843 aa13.21□□□□□ -0.29
LDHC-208ENST00000544105 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.29
LDHC-208ENST00000544105 TOM1L2Q6ZVM7 507 aa13.21□□□□□ -0.29
LDHC-208ENST00000544105 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
LDHC-208ENST00000544105 CRB1P82279 1406 aa13.21□□□□□ -0.3
LDHC-208ENST00000544105 NCAPD2Q15021 1401 aa13.21□□□□□ -0.3
LDHC-208ENST00000544105 PLEKHG2Q9H7P9 1386 aa13.2□□□□□ -0.3
LDHC-208ENST00000544105 SOS1Q07889 1333 aaPredicted RBP13.2□□□□□ -0.3
LDHC-208ENST00000544105 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
LDHC-208ENST00000544105 DZIP1LQ8IYY4 767 aaKnown RBP13.2□□□□□ -0.3
LDHC-208ENST00000544105 IL17REQ8NFR9 667 aa13.2□□□□□ -0.3
LDHC-208ENST00000544105 NOB1Q9ULX3 412 aaKnown RBP13.2□□□□□ -0.3
LDHC-208ENST00000544105 WDR17Q8IZU2 1322 aa13.19□□□□□ -0.3
LDHC-208ENST00000544105 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
LDHC-208ENST00000544105 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
LDHC-208ENST00000544105 ATF7IPQ6VMQ6 1270 aa13.19□□□□□ -0.3
LDHC-208ENST00000544105 C8orf58Q8NAV2 365 aa13.19□□□□□ -0.3
LDHC-208ENST00000544105 ARHGAP45Q92619 1136 aa13.19□□□□□ -0.3
LDHC-208ENST00000544105 FAM208AQ9UK61 1670 aaKnown RBP13.18□□□□□ -0.3
LDHC-208ENST00000544105 ROBO1Q9Y6N7 1651 aa13.18□□□□□ -0.3
LDHC-208ENST00000544105 UBAP1LF5GYI3 381 aa13.18□□□□□ -0.3
LDHC-208ENST00000544105 PIP4K2BP78356 416 aa13.18□□□□□ -0.3
LDHC-208ENST00000544105 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
LDHC-208ENST00000544105 ZBTB47Q9UFB7 747 aaPredicted RBP13.18□□□□□ -0.3
LDHC-208ENST00000544105 COG6Q9Y2V7 657 aa13.18□□□□□ -0.3
LDHC-208ENST00000544105 COL18A1P39060 1754 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 AHDC1Q5TGY3 1603 aaPredicted RBP13.17□□□□□ -0.3
LDHC-208ENST00000544105 CRYBG1Q9Y4K1 1723 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
LDHC-208ENST00000544105 IFNL2Q8IZJ0 200 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 MRPL50Q8N5N7 158 aaKnown RBP13.17□□□□□ -0.3
LDHC-208ENST00000544105 PANK1Q8TE04 598 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 CARD10Q9BWT7 1032 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
LDHC-208ENST00000544105 STRN4Q9NRL3 753 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 PLSCR2Q9NRY7 297 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 MIS18AQ9NYP9 233 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 RGPD5Q99666 1765 aa13.17□□□□□ -0.3
LDHC-208ENST00000544105 CAMTA1Q9Y6Y1 1673 aa13.16□□□□□ -0.3
LDHC-208ENST00000544105 MPRIPQ6WCQ1 1025 aa13.16□□□□□ -0.3
LDHC-208ENST00000544105 CLUAP1Q96AJ1 413 aa13.16□□□□□ -0.3
LDHC-208ENST00000544105 KIF12Q96FN5 646 aa13.16□□□□□ -0.3
LDHC-208ENST00000544105 RGPD2P0DJD1 1756 aa13.16□□□□□ -0.3
LDHC-208ENST00000544105 OVOS2A0A0G2JMS6 1433 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 BTBD11A6QL63 1104 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 MVPQ14764 893 aaKnown RBP13.15□□□□□ -0.3
LDHC-208ENST00000544105 CCDC30Q5VVM6 783 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 LGR6Q9HBX8 967 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 DDX19BQ9UMR2 479 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 CEMIPQ8WUJ3 1361 aa13.15□□□□□ -0.3
LDHC-208ENST00000544105 TRIM27P14373 513 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 IL2RBP14784 551 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 MAMSTRQ6ZN01 415 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 ITPRIPQ8IWB1 547 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 RASEFQ8IZ41 740 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 LMO7Q8WWI1 1683 aa13.14□□□□□ -0.31
LDHC-208ENST00000544105 COL5A2P05997 1499 aaPredicted RBP13.13□□□□□ -0.31
LDHC-208ENST00000544105 PHKG2P15735 406 aa13.13□□□□□ -0.31
LDHC-208ENST00000544105 CENPQQ7L2Z9 268 aaPredicted RBP13.13□□□□□ -0.31
LDHC-208ENST00000544105 ZCRB1Q8TBF4 217 aaKnown RBP13.13□□□□□ -0.31
LDHC-208ENST00000544105 DCAF5Q96JK2 942 aa13.13□□□□□ -0.31
LDHC-208ENST00000544105 BTG4Q9NY30 223 aa13.13□□□□□ -0.31
LDHC-208ENST00000544105 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
LDHC-208ENST00000544105 MAP3K13O43283 966 aa13.12□□□□□ -0.31
LDHC-208ENST00000544105 HOXB7P09629 217 aa13.12□□□□□ -0.31
LDHC-208ENST00000544105 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
LDHC-208ENST00000544105 PTPRCP08575 1304 aa13.12□□□□□ -0.31
LDHC-208ENST00000544105 PHLPP1O60346 1717 aa13.11□□□□□ -0.31
LDHC-208ENST00000544105 RLBP1P12271 317 aa13.11□□□□□ -0.31
LDHC-208ENST00000544105 LARP1Q6PKG0 1096 aaKnown RBP13.11□□□□□ -0.31
LDHC-208ENST00000544105 PCDH11XQ9BZA7 1347 aa13.11□□□□□ -0.31
LDHC-208ENST00000544105 PCDH11YQ9BZA8 1340 aa13.11□□□□□ -0.31
LDHC-208ENST00000544105 ABCA3Q99758 1704 aa13.1□□□□□ -0.31
LDHC-208ENST00000544105 LRRC37A3O60309 1634 aa13.1□□□□□ -0.31
LDHC-208ENST00000544105 KRT24Q2M2I5 525 aa13.1□□□□□ -0.31
LDHC-208ENST00000544105 RWDD1Q9H446 243 aaPredicted RBP13.1□□□□□ -0.31
LDHC-208ENST00000544105 COL22A1Q8NFW1 1626 aaPredicted RBP13.1□□□□□ -0.31
LDHC-208ENST00000544105 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-208ENST00000544105 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-208ENST00000544105 ADAMTS2O95450 1211 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 CABP4P57796 275 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 EIF4A1P60842 406 aaKnown RBP13.09□□□□□ -0.31
LDHC-208ENST00000544105 HDGFL1Q5TGJ6 251 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
LDHC-208ENST00000544105 TMEM57Q8N5G2 664 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 CERKQ8TCT0 537 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 SLC52A2Q9HAB3 445 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 SCUBE2Q9NQ36 999 aa13.09□□□□□ -0.31
LDHC-208ENST00000544105 COL14A1Q05707 1796 aaKnown RBP13.09□□□□□ -0.31
LDHC-208ENST00000544105 MEGF6O75095 1541 aa13.08□□□□□ -0.31
LDHC-208ENST00000544105 TTC5Q8N0Z6 440 aa13.08□□□□□ -0.32
LDHC-208ENST00000544105 USP35Q9P2H5 1018 aa13.08□□□□□ -0.32
LDHC-208ENST00000544105 TNNQ9UQP3 1299 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms