RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 MTHFSDQ2M296 383 aaKnown RBP25.62■■□□□ 1.69
SPPL3-208ENST00000543854 SLC16A10Q8TF71 515 aa25.62■■□□□ 1.69
SPPL3-208ENST00000543854 AK7Q96M32 723 aa25.61■■□□□ 1.69
SPPL3-208ENST00000543854 ADAMTS7Q9UKP4 1686 aa25.61■■□□□ 1.69
SPPL3-208ENST00000543854 ATP6V1AP38606 617 aa25.59■■□□□ 1.69
SPPL3-208ENST00000543854 UBR3Q6ZT12 1888 aa25.59■■□□□ 1.69
SPPL3-208ENST00000543854 COL24A1Q17RW2 1714 aa25.58■■□□□ 1.69
SPPL3-208ENST00000543854 MSH5O43196 834 aa25.58■■□□□ 1.69
SPPL3-208ENST00000543854 LINC00116Q8NCU8 138 aa25.58■■□□□ 1.69
SPPL3-208ENST00000543854 DDX10Q13206 875 aaKnown RBP25.57■■□□□ 1.68
SPPL3-208ENST00000543854 ITPK1Q13572 414 aa25.57■■□□□ 1.68
SPPL3-208ENST00000543854 NFATC2IPQ8NCF5 419 aa25.57■■□□□ 1.68
SPPL3-208ENST00000543854 GAS2L2Q8NHY3 880 aa25.57■■□□□ 1.68
SPPL3-208ENST00000543854 SGIP1Q9BQI5 828 aa25.57■■□□□ 1.68
SPPL3-208ENST00000543854 MAP3K5Q99683 1374 aa25.56■■□□□ 1.68
SPPL3-208ENST00000543854 U2AF1L5P0DN76 240 aaPredicted RBP25.56■■□□□ 1.68
SPPL3-208ENST00000543854 PRKAR2BP31323 418 aa25.56■■□□□ 1.68
SPPL3-208ENST00000543854 U2AF1Q01081 240 aaKnown RBP eCLIP25.56■■□□□ 1.68
SPPL3-208ENST00000543854 COL23A1Q86Y22 540 aaPredicted RBP25.56■■□□□ 1.68
SPPL3-208ENST00000543854 FLAD1Q8NFF5 587 aa25.56■■□□□ 1.68
SPPL3-208ENST00000543854 RBM42Q9BTD8 480 aaKnown RBP25.56■■□□□ 1.68
SPPL3-208ENST00000543854 RSPH6AQ9H0K4 717 aa25.56■■□□□ 1.68
SPPL3-208ENST00000543854 SLC52A2Q9HAB3 445 aa25.56■■□□□ 1.68
SPPL3-208ENST00000543854 COL5A3P25940 1745 aaPredicted RBP25.56■■□□□ 1.68
SPPL3-208ENST00000543854 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
SPPL3-208ENST00000543854 LGR6Q9HBX8 967 aa25.54■■□□□ 1.68
SPPL3-208ENST00000543854 CICQ96RK0 1608 aaPredicted RBP25.53■■□□□ 1.68
SPPL3-208ENST00000543854 POLD1P28340 1107 aa25.53■■□□□ 1.68
SPPL3-208ENST00000543854 PHF14O94880 888 aa25.52■■□□□ 1.68
SPPL3-208ENST00000543854 ARXQ96QS3 562 aa25.52■■□□□ 1.68
SPPL3-208ENST00000543854 GNAT3A8MTJ3 354 aa25.51■■□□□ 1.67
SPPL3-208ENST00000543854 GNPATO15228 680 aa25.51■■□□□ 1.67
SPPL3-208ENST00000543854 PTCD1O75127 700 aaKnown RBP25.51■■□□□ 1.67
SPPL3-208ENST00000543854 SSFA2P28290 1259 aa25.51■■□□□ 1.67
SPPL3-208ENST00000543854 RALBP1Q15311 655 aa25.51■■□□□ 1.67
SPPL3-208ENST00000543854 SLC4A9Q96Q91 983 aa25.51■■□□□ 1.67
SPPL3-208ENST00000543854 TJP1Q07157 1748 aa25.5■■□□□ 1.67
SPPL3-208ENST00000543854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.49■■□□□ 1.67
SPPL3-208ENST00000543854 FCHSD2O94868 740 aa25.49■■□□□ 1.67
SPPL3-208ENST00000543854 AMIGO3Q86WK7 504 aa25.49■■□□□ 1.67
SPPL3-208ENST00000543854 FHDC1Q9C0D6 1143 aaPredicted RBP25.49■■□□□ 1.67
SPPL3-208ENST00000543854 CNTNAP4Q9C0A0 1308 aa25.48■■□□□ 1.67
SPPL3-208ENST00000543854 PHACTR3Q96KR7 559 aa25.48■■□□□ 1.67
SPPL3-208ENST00000543854 MSL1Q68DK7 614 aa25.47■■□□□ 1.67
SPPL3-208ENST00000543854 KCPQ6ZWJ8 1503 aa25.47■■□□□ 1.67
SPPL3-208ENST00000543854 SIPA1L3O60292 1781 aaPredicted RBP25.46■■□□□ 1.67
SPPL3-208ENST00000543854 UBR2Q8IWV8 1755 aa25.46■■□□□ 1.67
SPPL3-208ENST00000543854 TEFQ10587 303 aa25.45■■□□□ 1.66
SPPL3-208ENST00000543854 RC3H1Q5TC82 1133 aaKnown RBP25.44■■□□□ 1.66
SPPL3-208ENST00000543854 SMIM5Q71RC9 77 aa25.44■■□□□ 1.66
SPPL3-208ENST00000543854 RTCBQ9Y3I0 505 aaKnown RBP25.44■■□□□ 1.66
SPPL3-208ENST00000543854 MYBBP1AQ9BQG0 1328 aaKnown RBP25.43■■□□□ 1.66
SPPL3-208ENST00000543854 NEFMP07197 916 aa25.43■■□□□ 1.66
SPPL3-208ENST00000543854 SLC39A6Q13433 755 aa25.43■■□□□ 1.66
SPPL3-208ENST00000543854 IL17REQ8NFR9 667 aa25.43■■□□□ 1.66
SPPL3-208ENST00000543854 SYT17Q9BSW7 474 aa25.43■■□□□ 1.66
SPPL3-208ENST00000543854 CEMIPQ8WUJ3 1361 aa25.43■■□□□ 1.66
SPPL3-208ENST00000543854 DCAF8L1A6NGE4 600 aa25.42■■□□□ 1.66
SPPL3-208ENST00000543854 KLHL34Q8N239 644 aa25.42■■□□□ 1.66
SPPL3-208ENST00000543854 MYH14Q7Z406 1995 aaKnown RBP25.42■■□□□ 1.66
SPPL3-208ENST00000543854 C4AP0C0L4 1744 aa25.41■■□□□ 1.66
SPPL3-208ENST00000543854 TTC5Q8N0Z6 440 aa25.41■■□□□ 1.66
SPPL3-208ENST00000543854 ADRA2BP18089 450 aa25.4■■□□□ 1.66
SPPL3-208ENST00000543854 CRKLP46109 303 aaKnown RBP25.4■■□□□ 1.66
SPPL3-208ENST00000543854 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
SPPL3-208ENST00000543854 RPS6KA4O75676 772 aa25.38■■□□□ 1.65
SPPL3-208ENST00000543854 TRAPPC3LQ5T215 181 aa25.38■■□□□ 1.65
SPPL3-208ENST00000543854 DNAJC10Q8IXB1 793 aa25.37■■□□□ 1.65
SPPL3-208ENST00000543854 PNNQ9H307 717 aaKnown RBP25.37■■□□□ 1.65
SPPL3-208ENST00000543854 VSIG10Q8N0Z9 540 aa25.36■■□□□ 1.65
SPPL3-208ENST00000543854 MAPK8IP3Q9UPT6 1336 aa25.36■■□□□ 1.65
SPPL3-208ENST00000543854 ZNF790Q6PG37 636 aa25.35■■□□□ 1.65
SPPL3-208ENST00000543854 DLG5Q8TDM6 1919 aa25.35■■□□□ 1.65
SPPL3-208ENST00000543854 HTATSF1O43719 755 aaKnown RBP25.34■■□□□ 1.65
SPPL3-208ENST00000543854 RFC4P35249 363 aa25.34■■□□□ 1.65
SPPL3-208ENST00000543854 MCM10Q7L590 875 aa25.34■■□□□ 1.65
SPPL3-208ENST00000543854 ARHGEF1Q92888 912 aaKnown RBP25.34■■□□□ 1.65
SPPL3-208ENST00000543854 CCDC87Q9NVE4 849 aa25.34■■□□□ 1.65
SPPL3-208ENST00000543854 BTBD11A6QL63 1104 aa25.33■■□□□ 1.65
SPPL3-208ENST00000543854 PLEKHF1Q96S99 279 aa25.33■■□□□ 1.65
SPPL3-208ENST00000543854 CYP19A1P11511 503 aaPredicted RBP25.32■■□□□ 1.64
SPPL3-208ENST00000543854 INTS5Q6P9B9 1019 aaKnown RBP25.32■■□□□ 1.64
SPPL3-208ENST00000543854 HEG1Q9ULI3 1381 aa25.31■■□□□ 1.64
SPPL3-208ENST00000543854 ZNF496Q96IT1 587 aaPredicted RBP25.31■■□□□ 1.64
SPPL3-208ENST00000543854 PRKRIP1Q9H875 184 aaPredicted RBP25.31■■□□□ 1.64
SPPL3-208ENST00000543854 DCTN1Q14203 1278 aa25.3■■□□□ 1.64
SPPL3-208ENST00000543854 FMNL2Q96PY5 1086 aa25.3■■□□□ 1.64
SPPL3-208ENST00000543854 NFE2L2Q16236 605 aa25.29■■□□□ 1.64
SPPL3-208ENST00000543854 NLGN2Q8NFZ4 835 aa25.29■■□□□ 1.64
SPPL3-208ENST00000543854 SOS1Q07889 1333 aaPredicted RBP25.29■■□□□ 1.64
SPPL3-208ENST00000543854 UTRNP46939 3433 aa25.28■■□□□ 1.64
SPPL3-208ENST00000543854 STARD3NLO95772 234 aa25.28■■□□□ 1.64
SPPL3-208ENST00000543854 MMP10P09238 476 aa25.28■■□□□ 1.64
SPPL3-208ENST00000543854 NLGN1Q8N2Q7 840 aa25.28■■□□□ 1.64
SPPL3-208ENST00000543854 GOLGB1Q14789 3259 aaKnown RBP25.28■■□□□ 1.64
SPPL3-208ENST00000543854 GYS1P13807 737 aa25.27■■□□□ 1.64
SPPL3-208ENST00000543854 ZBTB1Q9Y2K1 713 aa25.27■■□□□ 1.64
SPPL3-208ENST00000543854 CD2APQ9Y5K6 639 aa25.27■■□□□ 1.64
SPPL3-208ENST00000543854 USP42Q9H9J4 1324 aaKnown RBP25.27■■□□□ 1.64
SPPL3-208ENST00000543854 WDR43Q15061 677 aaKnown RBP eCLIP25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms