RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SYTL4Q96C24 671 aaPredicted RBP15.47■□□□□ 0.07
DDB1-223ENST00000543658 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
DDB1-223ENST00000543658 IFT57Q9NWB7 429 aa15.47■□□□□ 0.07
DDB1-223ENST00000543658 TMOD3Q9NYL9 352 aa15.47■□□□□ 0.07
DDB1-223ENST00000543658 PAPPAQ13219 1627 aa15.46■□□□□ 0.07
DDB1-223ENST00000543658 BTAF1O14981 1849 aa15.46■□□□□ 0.07
DDB1-223ENST00000543658 TAF7Q15545 349 aaPredicted RBP15.46■□□□□ 0.07
DDB1-223ENST00000543658 ADRA2BP18089 450 aa15.45■□□□□ 0.06
DDB1-223ENST00000543658 ACSBG1Q96GR2 724 aa15.45■□□□□ 0.06
DDB1-223ENST00000543658 CFAP44Q96MT7 982 aa15.45■□□□□ 0.06
DDB1-223ENST00000543658 TSPYL4Q9UJ04 414 aa15.45■□□□□ 0.06
DDB1-223ENST00000543658 BTBD11A6QL63 1104 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 SOCS7O14512 581 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 FAM196AQ6ZSG2 479 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 TTC5Q8N0Z6 440 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 UBR2Q8IWV8 1755 aa15.44■□□□□ 0.06
DDB1-223ENST00000543658 BCL9O00512 1426 aa15.43■□□□□ 0.06
DDB1-223ENST00000543658 NFATC2IPQ8NCF5 419 aa15.43■□□□□ 0.06
DDB1-223ENST00000543658 SLFN5Q08AF3 891 aa15.42■□□□□ 0.06
DDB1-223ENST00000543658 FAM182BQ5T319 152 aa15.42■□□□□ 0.06
DDB1-223ENST00000543658 CENPBP07199 599 aaPredicted RBP15.41■□□□□ 0.06
DDB1-223ENST00000543658 PRIM1P49642 420 aaKnown RBP15.41■□□□□ 0.06
DDB1-223ENST00000543658 CDCA7LQ96GN5 454 aa15.41■□□□□ 0.06
DDB1-223ENST00000543658 MBIPQ9NS73 344 aa15.41■□□□□ 0.06
DDB1-223ENST00000543658 LAMB4A4D0S4 1761 aa15.41■□□□□ 0.06
DDB1-223ENST00000543658 FANCIQ9NVI1 1328 aa15.41■□□□□ 0.06
DDB1-223ENST00000543658 TSR2Q969E8 191 aaKnown RBP15.4■□□□□ 0.06
DDB1-223ENST00000543658 CHL1O00533 1208 aa15.39■□□□□ 0.05
DDB1-223ENST00000543658 ZNF853P0CG23 659 aa15.39■□□□□ 0.05
DDB1-223ENST00000543658 MIS18AQ9NYP9 233 aa15.39■□□□□ 0.05
DDB1-223ENST00000543658 TNS1Q9HBL0 1735 aaKnown RBP15.38■□□□□ 0.05
DDB1-223ENST00000543658 ZNF790Q6PG37 636 aa15.38■□□□□ 0.05
DDB1-223ENST00000543658 PIGBQ92521 554 aa15.38■□□□□ 0.05
DDB1-223ENST00000543658 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
DDB1-223ENST00000543658 C5P01031 1676 aa15.38■□□□□ 0.05
DDB1-223ENST00000543658 CACNA1FO60840 1977 aa15.37■□□□□ 0.05
DDB1-223ENST00000543658 SLC39A6Q13433 755 aa15.37■□□□□ 0.05
DDB1-223ENST00000543658 DUSP27Q5VZP5 1158 aa15.37■□□□□ 0.05
DDB1-223ENST00000543658 SMARCC1Q92922 1105 aaPredicted RBP15.37■□□□□ 0.05
DDB1-223ENST00000543658 LY75O60449 1722 aa15.37■□□□□ 0.05
DDB1-223ENST00000543658 FMNL2Q96PY5 1086 aa15.36■□□□□ 0.05
DDB1-223ENST00000543658 KCPQ6ZWJ8 1503 aa15.35■□□□□ 0.05
DDB1-223ENST00000543658 KCNQ2O43526 872 aa15.35■□□□□ 0.05
DDB1-223ENST00000543658 TRIM37O94972 964 aa15.35■□□□□ 0.05
DDB1-223ENST00000543658 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
DDB1-223ENST00000543658 BCL11BQ9C0K0 894 aaPredicted RBP15.35■□□□□ 0.05
DDB1-223ENST00000543658 PALLDQ8WX93 1383 aa15.35■□□□□ 0.05
DDB1-223ENST00000543658 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
DDB1-223ENST00000543658 RGPD3A6NKT7 1758 aaPredicted RBP15.34■□□□□ 0.05
DDB1-223ENST00000543658 RGPD4Q7Z3J3 1758 aa15.34■□□□□ 0.05
DDB1-223ENST00000543658 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
DDB1-223ENST00000543658 RBM42Q9BTD8 480 aaKnown RBP15.34■□□□□ 0.05
DDB1-223ENST00000543658 CHMP4AQ9BY43 222 aa15.34■□□□□ 0.05
DDB1-223ENST00000543658 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
DDB1-223ENST00000543658 KCNQ3O43525 872 aa15.33■□□□□ 0.04
DDB1-223ENST00000543658 PTCD1O75127 700 aaKnown RBP15.33■□□□□ 0.04
DDB1-223ENST00000543658 EIF4A1P60842 406 aaKnown RBP15.33■□□□□ 0.04
DDB1-223ENST00000543658 SF3B2Q13435 895 aaKnown RBP15.33■□□□□ 0.04
DDB1-223ENST00000543658 TWISTNBQ3B726 338 aaPredicted RBP15.33■□□□□ 0.04
DDB1-223ENST00000543658 ATG3Q9NT62 314 aa15.33■□□□□ 0.04
DDB1-223ENST00000543658 TJP1Q07157 1748 aa15.33■□□□□ 0.04
DDB1-223ENST00000543658 SOS1Q07889 1333 aaPredicted RBP15.33■□□□□ 0.04
DDB1-223ENST00000543658 CICQ96RK0 1608 aaPredicted RBP15.32■□□□□ 0.04
DDB1-223ENST00000543658 TAF1LQ8IZX4 1826 aa15.32■□□□□ 0.04
DDB1-223ENST00000543658 CT47B1P0C2W7 299 aaPredicted RBP15.32■□□□□ 0.04
DDB1-223ENST00000543658 HEG1Q9ULI3 1381 aa15.32■□□□□ 0.04
DDB1-223ENST00000543658 ELL2O00472 640 aaPredicted RBP15.31■□□□□ 0.04
DDB1-223ENST00000543658 HOXB7P09629 217 aa15.31■□□□□ 0.04
DDB1-223ENST00000543658 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
DDB1-223ENST00000543658 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
DDB1-223ENST00000543658 COL5A3P25940 1745 aaPredicted RBP15.31■□□□□ 0.04
DDB1-223ENST00000543658 APBA3O96018 575 aa15.29■□□□□ 0.04
DDB1-223ENST00000543658 KRT24Q2M2I5 525 aa15.29■□□□□ 0.04
DDB1-223ENST00000543658 VSIG10Q8N0Z9 540 aa15.29■□□□□ 0.04
DDB1-223ENST00000543658 C8orf58Q8NAV2 365 aa15.29■□□□□ 0.04
DDB1-223ENST00000543658 ZNF428Q96B54 188 aa15.29■□□□□ 0.04
DDB1-223ENST00000543658 TEX13AQ9BXU3 409 aaPredicted RBP15.29■□□□□ 0.04
DDB1-223ENST00000543658 LOC102724428A0A0B4J2F2 783 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 GIGYF1O75420 1035 aaPredicted RBP15.28■□□□□ 0.04
DDB1-223ENST00000543658 EIF2S2P20042 333 aaKnown RBP15.28■□□□□ 0.04
DDB1-223ENST00000543658 HMGB2P26583 209 aaKnown RBP15.28■□□□□ 0.04
DDB1-223ENST00000543658 ATP6V1AP38606 617 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 SIK1P57059 783 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 HDGFL1Q5TGJ6 251 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 CCDC30Q5VVM6 783 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 PTF1AQ7RTS3 328 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 TSPYL6Q8N831 410 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
DDB1-223ENST00000543658 CCNL1Q9UK58 526 aaPredicted RBP15.27■□□□□ 0.04
DDB1-223ENST00000543658 VAMP4O75379 141 aa15.26■□□□□ 0.03
DDB1-223ENST00000543658 STARD3NLO95772 234 aa15.26■□□□□ 0.03
DDB1-223ENST00000543658 BAG6P46379 1132 aa15.26■□□□□ 0.03
DDB1-223ENST00000543658 NECTIN2Q92692 538 aa15.26■□□□□ 0.03
DDB1-223ENST00000543658 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
DDB1-223ENST00000543658 SMC4Q9NTJ3 1288 aa15.25■□□□□ 0.03
DDB1-223ENST00000543658 C4BP0C0L5 1744 aa15.24■□□□□ 0.03
DDB1-223ENST00000543658 ALDH1L2Q3SY69 923 aa15.24■□□□□ 0.03
DDB1-223ENST00000543658 SLC27A3Q5K4L6 730 aa15.24■□□□□ 0.03
DDB1-223ENST00000543658 NPM2Q86SE8 214 aaKnown RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms