RNA–Protein interactions for RNA: ENST00000543608.5

SPPL3-207, Transcript of signal peptide peptidase like 3, humanhuman

TSL 3

Gene SPPL3, Length 636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-207ENST00000543608 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.21■■□□□ 1.15
SPPL3-207ENST00000543608 IL13P35225 146 aa22.21■■□□□ 1.15
SPPL3-207ENST00000543608 ATP6V1AP38606 617 aa22.21■■□□□ 1.15
SPPL3-207ENST00000543608 FLAD1Q8NFF5 587 aa22.21■■□□□ 1.15
SPPL3-207ENST00000543608 GOLGB1Q14789 3259 aaKnown RBP22.21■■□□□ 1.15
SPPL3-207ENST00000543608 DCAF5Q96JK2 942 aa22.2■■□□□ 1.14
SPPL3-207ENST00000543608 CC2D1BQ5T0F9 858 aaKnown RBP22.19■■□□□ 1.14
SPPL3-207ENST00000543608 COL5A3P25940 1745 aaPredicted RBP22.19■■□□□ 1.14
SPPL3-207ENST00000543608 ERVV-2B6SEH9 535 aa22.18■■□□□ 1.14
SPPL3-207ENST00000543608 GNPATO15228 680 aa22.18■■□□□ 1.14
SPPL3-207ENST00000543608 PER1O15534 1290 aaPredicted RBP22.18■■□□□ 1.14
SPPL3-207ENST00000543608 HSP90AB1P08238 724 aaKnown RBP22.18■■□□□ 1.14
SPPL3-207ENST00000543608 HMGB2P26583 209 aaKnown RBP22.18■■□□□ 1.14
SPPL3-207ENST00000543608 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
SPPL3-207ENST00000543608 SLC4A9Q96Q91 983 aa22.18■■□□□ 1.14
SPPL3-207ENST00000543608 MTHFSP49914 203 aa22.17■■□□□ 1.14
SPPL3-207ENST00000543608 CNGB1Q14028 1251 aaPredicted RBP22.17■■□□□ 1.14
SPPL3-207ENST00000543608 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
SPPL3-207ENST00000543608 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
SPPL3-207ENST00000543608 SSFA2P28290 1259 aa22.16■■□□□ 1.14
SPPL3-207ENST00000543608 C1orf141Q5JVX7 400 aa22.16■■□□□ 1.14
SPPL3-207ENST00000543608 RBM42Q9BTD8 480 aaKnown RBP22.16■■□□□ 1.14
SPPL3-207ENST00000543608 CABP4P57796 275 aa22.15■■□□□ 1.14
SPPL3-207ENST00000543608 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
SPPL3-207ENST00000543608 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
SPPL3-207ENST00000543608 YBX3P16989 372 aaKnown RBP eCLIP22.14■■□□□ 1.13
SPPL3-207ENST00000543608 HMOX1P09601 288 aa22.13■■□□□ 1.13
SPPL3-207ENST00000543608 MYH14Q7Z406 1995 aaKnown RBP22.12■■□□□ 1.13
SPPL3-207ENST00000543608 C4AP0C0L4 1744 aa22.11■■□□□ 1.13
SPPL3-207ENST00000543608 TJP1Q07157 1748 aa22.11■■□□□ 1.13
SPPL3-207ENST00000543608 COL3A1P02461 1466 aaPredicted RBP22.1■■□□□ 1.13
SPPL3-207ENST00000543608 PTCD1O75127 700 aaKnown RBP22.1■■□□□ 1.13
SPPL3-207ENST00000543608 NFATC2IPQ8NCF5 419 aa22.1■■□□□ 1.13
SPPL3-207ENST00000543608 CD2APQ9Y5K6 639 aa22.09■■□□□ 1.13
SPPL3-207ENST00000543608 WWC3Q9ULE0 1092 aa22.08■■□□□ 1.13
SPPL3-207ENST00000543608 CNTNAP4Q9C0A0 1308 aa22.07■■□□□ 1.12
SPPL3-207ENST00000543608 CICQ96RK0 1608 aaPredicted RBP22.07■■□□□ 1.12
SPPL3-207ENST00000543608 DIAPH1O60610 1272 aaKnown RBP22.07■■□□□ 1.12
SPPL3-207ENST00000543608 RTCBQ9Y3I0 505 aaKnown RBP22.07■■□□□ 1.12
SPPL3-207ENST00000543608 AKAP4Q5JQC9 854 aa22.06■■□□□ 1.12
SPPL3-207ENST00000543608 MRC1P22897 1456 aa22.06■■□□□ 1.12
SPPL3-207ENST00000543608 NPC1L1Q9UHC9 1359 aa22.05■■□□□ 1.12
SPPL3-207ENST00000543608 TRAPPC3LQ5T215 181 aa22.05■■□□□ 1.12
SPPL3-207ENST00000543608 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
SPPL3-207ENST00000543608 ADAMTS7Q9UKP4 1686 aa22.04■■□□□ 1.12
SPPL3-207ENST00000543608 MMP10P09238 476 aa22.04■■□□□ 1.12
SPPL3-207ENST00000543608 MTHFSDQ2M296 383 aaKnown RBP22.03■■□□□ 1.12
SPPL3-207ENST00000543608 RC3H1Q5TC82 1133 aaKnown RBP22.03■■□□□ 1.12
SPPL3-207ENST00000543608 ARHGEF1Q92888 912 aaKnown RBP22.03■■□□□ 1.12
SPPL3-207ENST00000543608 KIAA1551Q9HCM1 1747 aa22.03■■□□□ 1.12
SPPL3-207ENST00000543608 KIF13BQ9NQT8 1826 aa22.02■■□□□ 1.12
SPPL3-207ENST00000543608 GRIN3BO60391 1043 aa22.02■■□□□ 1.12
SPPL3-207ENST00000543608 RPS6KA4O75676 772 aa22.02■■□□□ 1.12
SPPL3-207ENST00000543608 SLC52A2Q9HAB3 445 aa22.02■■□□□ 1.12
SPPL3-207ENST00000543608 RNMTO43148 476 aaKnown RBP22.01■■□□□ 1.11
SPPL3-207ENST00000543608 CRKLP46109 303 aaKnown RBP22.01■■□□□ 1.11
SPPL3-207ENST00000543608 N4BP2Q86UW6 1770 aaPredicted RBP22.01■■□□□ 1.11
SPPL3-207ENST00000543608 KCPQ6ZWJ8 1503 aa22.01■■□□□ 1.11
SPPL3-207ENST00000543608 U2SURPO15042 1029 aaKnown RBP22■■□□□ 1.11
SPPL3-207ENST00000543608 ADRA2BP18089 450 aa22■■□□□ 1.11
SPPL3-207ENST00000543608 SLC39A6Q13433 755 aa22■■□□□ 1.11
SPPL3-207ENST00000543608 GYS1P13807 737 aa21.99■■□□□ 1.11
SPPL3-207ENST00000543608 RFC4P35249 363 aa21.99■■□□□ 1.11
SPPL3-207ENST00000543608 PXDNLA1KZ92 1463 aa21.98■■□□□ 1.11
SPPL3-207ENST00000543608 DNAJC10Q8IXB1 793 aa21.98■■□□□ 1.11
SPPL3-207ENST00000543608 SRP68Q9UHB9 627 aaKnown RBP21.98■■□□□ 1.11
SPPL3-207ENST00000543608 C10orf71Q711Q0 1435 aa21.97■■□□□ 1.11
SPPL3-207ENST00000543608 UBR2Q8IWV8 1755 aa21.97■■□□□ 1.11
SPPL3-207ENST00000543608 NLGN1Q8N2Q7 840 aa21.97■■□□□ 1.11
SPPL3-207ENST00000543608 INTS5Q6P9B9 1019 aaKnown RBP21.95■■□□□ 1.1
SPPL3-207ENST00000543608 USP42Q9H9J4 1324 aaKnown RBP21.94■■□□□ 1.1
SPPL3-207ENST00000543608 SIPA1L3O60292 1781 aaPredicted RBP21.94■■□□□ 1.1
SPPL3-207ENST00000543608 CCDC87Q9NVE4 849 aa21.93■■□□□ 1.1
SPPL3-207ENST00000543608 ATP10DQ9P241 1426 aa21.93■■□□□ 1.1
SPPL3-207ENST00000543608 FKBP8Q14318 412 aa21.92■■□□□ 1.1
SPPL3-207ENST00000543608 PARP3Q9Y6F1 533 aa21.92■■□□□ 1.1
SPPL3-207ENST00000543608 BRCA1P38398 1863 aaKnown RBP21.92■■□□□ 1.1
SPPL3-207ENST00000543608 ADCY9O60503 1353 aa21.9■■□□□ 1.1
SPPL3-207ENST00000543608 SOS1Q07889 1333 aaPredicted RBP21.9■■□□□ 1.1
SPPL3-207ENST00000543608 A0A0G2JLW4 131 aa21.9■■□□□ 1.1
SPPL3-207ENST00000543608 CYP19A1P11511 503 aaPredicted RBP21.9■■□□□ 1.1
SPPL3-207ENST00000543608 DDR1Q08345 913 aa21.9■■□□□ 1.1
SPPL3-207ENST00000543608 ZBTB1Q9Y2K1 713 aa21.9■■□□□ 1.1
SPPL3-207ENST00000543608 GIGYF1O75420 1035 aaPredicted RBP21.89■■□□□ 1.09
SPPL3-207ENST00000543608 PPP2R1AP30153 589 aa21.89■■□□□ 1.09
SPPL3-207ENST00000543608 IL17REQ8NFR9 667 aa21.89■■□□□ 1.09
SPPL3-207ENST00000543608 GAS2L2Q8NHY3 880 aa21.89■■□□□ 1.09
SPPL3-207ENST00000543608 PRKAR2BP31323 418 aa21.88■■□□□ 1.09
SPPL3-207ENST00000543608 C1QTNF8P60827 252 aa21.88■■□□□ 1.09
SPPL3-207ENST00000543608 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
SPPL3-207ENST00000543608 CFAP53Q96M91 514 aa21.88■■□□□ 1.09
SPPL3-207ENST00000543608 RSPH6AQ9H0K4 717 aa21.88■■□□□ 1.09
SPPL3-207ENST00000543608 COL15A1P39059 1388 aa21.87■■□□□ 1.09
SPPL3-207ENST00000543608 GNAT3A8MTJ3 354 aa21.87■■□□□ 1.09
SPPL3-207ENST00000543608 DPEP1P16444 411 aa21.87■■□□□ 1.09
SPPL3-207ENST00000543608 TGFB2P61812 414 aa21.87■■□□□ 1.09
SPPL3-207ENST00000543608 USPL1Q5W0Q7 1092 aa21.87■■□□□ 1.09
SPPL3-207ENST00000543608 TEFQ10587 303 aa21.86■■□□□ 1.09
SPPL3-207ENST00000543608 TTC5Q8N0Z6 440 aa21.86■■□□□ 1.09
SPPL3-207ENST00000543608 BCS1LQ9Y276 419 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms