RNA–Protein interactions for RNA: ENST00000543405.1

CACNA2D4-216, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 5

Gene CACNA2D4, Length 575 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-216ENST00000543405 BRCA1P38398 1863 aaKnown RBP17.36■□□□□ 0.37
CACNA2D4-216ENST00000543405 MMP10P09238 476 aa17.36■□□□□ 0.37
CACNA2D4-216ENST00000543405 ITPK1Q13572 414 aa17.36■□□□□ 0.37
CACNA2D4-216ENST00000543405 GNPATO15228 680 aa17.35■□□□□ 0.37
CACNA2D4-216ENST00000543405 COL13A1Q5TAT6 717 aaPredicted RBP17.35■□□□□ 0.37
CACNA2D4-216ENST00000543405 EMILIN1Q9Y6C2 1016 aa17.35■□□□□ 0.37
CACNA2D4-216ENST00000543405 KDRP35968 1356 aa17.35■□□□□ 0.37
CACNA2D4-216ENST00000543405 HTRA3P83110 453 aa17.34■□□□□ 0.37
CACNA2D4-216ENST00000543405 BCS1LQ9Y276 419 aa17.34■□□□□ 0.37
CACNA2D4-216ENST00000543405 COL5A3P25940 1745 aaPredicted RBP17.33■□□□□ 0.37
CACNA2D4-216ENST00000543405 C4AP0C0L4 1744 aa17.33■□□□□ 0.36
CACNA2D4-216ENST00000543405 PCNTO95613 3336 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 NPM3O75607 178 aaKnown RBP17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 TMF1P82094 1093 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 JMYQ8N9B5 988 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 KLRG1Q96E93 195 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 ASAP1Q9ULH1 1129 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
CACNA2D4-216ENST00000543405 A0A0G2JLW4 131 aa17.31■□□□□ 0.36
CACNA2D4-216ENST00000543405 TGFB2P61812 414 aa17.31■□□□□ 0.36
CACNA2D4-216ENST00000543405 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
CACNA2D4-216ENST00000543405 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
CACNA2D4-216ENST00000543405 TMOD3Q9NYL9 352 aa17.31■□□□□ 0.36
CACNA2D4-216ENST00000543405 PLEKHG2Q9H7P9 1386 aa17.3■□□□□ 0.36
CACNA2D4-216ENST00000543405 ATG3Q9NT62 314 aa17.3■□□□□ 0.36
CACNA2D4-216ENST00000543405 ARFGEF1Q9Y6D6 1849 aa17.3■□□□□ 0.36
CACNA2D4-216ENST00000543405 WASHC2AQ641Q2 1341 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 CAPN15O75808 1086 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 PHKG2P15735 406 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 ARHGAP27Q6ZUM4 889 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 EYA1Q99502 592 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 KCPQ6ZWJ8 1503 aa17.29■□□□□ 0.36
CACNA2D4-216ENST00000543405 DPEP1P16444 411 aa17.28■□□□□ 0.36
CACNA2D4-216ENST00000543405 FCHSD2O94868 740 aa17.27■□□□□ 0.36
CACNA2D4-216ENST00000543405 C9orf131Q5VYM1 1079 aa17.27■□□□□ 0.36
CACNA2D4-216ENST00000543405 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
CACNA2D4-216ENST00000543405 SLC4A9Q96Q91 983 aa17.27■□□□□ 0.36
CACNA2D4-216ENST00000543405 TNRC6CQ9HCJ0 1690 aaKnown RBP17.26■□□□□ 0.35
CACNA2D4-216ENST00000543405 MYH14Q7Z406 1995 aaKnown RBP17.26■□□□□ 0.35
CACNA2D4-216ENST00000543405 FSTL1Q12841 308 aa17.26■□□□□ 0.35
CACNA2D4-216ENST00000543405 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
CACNA2D4-216ENST00000543405 NLGN1Q8N2Q7 840 aa17.25■□□□□ 0.35
CACNA2D4-216ENST00000543405 CNTNAP4Q9C0A0 1308 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 GYS1P13807 737 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 KCNA3P22001 575 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 CDCA8Q53HL2 280 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 TRAPPC3LQ5T215 181 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 RC3H1Q5TC82 1133 aaKnown RBP17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 TNS4Q8IZW8 715 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 CCDC87Q9NVE4 849 aa17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 RTCBQ9Y3I0 505 aaKnown RBP17.24■□□□□ 0.35
CACNA2D4-216ENST00000543405 PPM1GO15355 546 aaPredicted RBP17.23■□□□□ 0.35
CACNA2D4-216ENST00000543405 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
CACNA2D4-216ENST00000543405 PRELPP51888 382 aa17.22■□□□□ 0.35
CACNA2D4-216ENST00000543405 DCAF5Q96JK2 942 aa17.22■□□□□ 0.35
CACNA2D4-216ENST00000543405 POLKQ9UBT6 870 aa17.22■□□□□ 0.35
CACNA2D4-216ENST00000543405 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.35
CACNA2D4-216ENST00000543405 ADAMTS7Q9UKP4 1686 aa17.21■□□□□ 0.35
CACNA2D4-216ENST00000543405 TJP1Q07157 1748 aa17.21■□□□□ 0.35
CACNA2D4-216ENST00000543405 KDM2BQ8NHM5 1336 aa17.21■□□□□ 0.34
CACNA2D4-216ENST00000543405 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 RPS6KA4O75676 772 aa17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 RNF181Q9P0P0 153 aa17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 PARP3Q9Y6F1 533 aa17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 SBF1O95248 1867 aa17.2■□□□□ 0.34
CACNA2D4-216ENST00000543405 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
CACNA2D4-216ENST00000543405 RRAGCQ9HB90 399 aa17.18■□□□□ 0.34
CACNA2D4-216ENST00000543405 PIM2Q9P1W9 311 aa17.18■□□□□ 0.34
CACNA2D4-216ENST00000543405 RFC4P35249 363 aa17.17■□□□□ 0.34
CACNA2D4-216ENST00000543405 DALRD3Q5D0E6 543 aaKnown RBP17.17■□□□□ 0.34
CACNA2D4-216ENST00000543405 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
CACNA2D4-216ENST00000543405 DDR1Q08345 913 aa17.16■□□□□ 0.34
CACNA2D4-216ENST00000543405 USP42Q9H9J4 1324 aaKnown RBP17.16■□□□□ 0.34
CACNA2D4-216ENST00000543405 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
CACNA2D4-216ENST00000543405 HSPA1AP0DMV8 641 aaKnown RBP17.15■□□□□ 0.34
CACNA2D4-216ENST00000543405 HSPA1BP0DMV9 641 aaKnown RBP17.15■□□□□ 0.34
CACNA2D4-216ENST00000543405 CHRNA5P30532 468 aa17.14■□□□□ 0.33
CACNA2D4-216ENST00000543405 FKBP8Q14318 412 aa17.14■□□□□ 0.33
CACNA2D4-216ENST00000543405 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
CACNA2D4-216ENST00000543405 DLEC1Q9Y238 1755 aa17.13■□□□□ 0.33
CACNA2D4-216ENST00000543405 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
CACNA2D4-216ENST00000543405 RASSF7Q02833 373 aa17.13■□□□□ 0.33
CACNA2D4-216ENST00000543405 TIAM2Q8IVF5 1701 aa17.13■□□□□ 0.33
CACNA2D4-216ENST00000543405 NRXN2Q9P2S2 1712 aa17.13■□□□□ 0.33
CACNA2D4-216ENST00000543405 ZC3H4Q9UPT8 1303 aaKnown RBP17.12■□□□□ 0.33
CACNA2D4-216ENST00000543405 SCN11AQ9UI33 1791 aa17.12■□□□□ 0.33
CACNA2D4-216ENST00000543405 CABP4P57796 275 aa17.11■□□□□ 0.33
CACNA2D4-216ENST00000543405 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
CACNA2D4-216ENST00000543405 ZNF530Q6P9A1 599 aaPredicted RBP17.11■□□□□ 0.33
CACNA2D4-216ENST00000543405 AFDNP55196 1824 aaKnown RBP17.11■□□□□ 0.33
CACNA2D4-216ENST00000543405 POLRMTO00411 1230 aaKnown RBP17.1■□□□□ 0.33
CACNA2D4-216ENST00000543405 AMOTQ4VCS5 1084 aa17.1■□□□□ 0.33
CACNA2D4-216ENST00000543405 PTCD1O75127 700 aaKnown RBP17.09■□□□□ 0.33
CACNA2D4-216ENST00000543405 TM4SF1P30408 202 aa17.09■□□□□ 0.33
CACNA2D4-216ENST00000543405 TNNT2P45379 298 aaPredicted RBP17.08■□□□□ 0.32
CACNA2D4-216ENST00000543405 INTS5Q6P9B9 1019 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms