RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 AMIGO3Q86WK7 504 aa23.85■■□□□ 1.41
PPP1CA-210ENST00000542876 ATG3Q9NT62 314 aa23.84■■□□□ 1.41
PPP1CA-210ENST00000542876 ERVV-2B6SEH9 535 aa23.83■■□□□ 1.41
PPP1CA-210ENST00000542876 GIGYF1O75420 1035 aaPredicted RBP23.83■■□□□ 1.41
PPP1CA-210ENST00000542876 ITPK1Q13572 414 aa23.83■■□□□ 1.41
PPP1CA-210ENST00000542876 SMIM5Q71RC9 77 aa23.83■■□□□ 1.41
PPP1CA-210ENST00000542876 DCAF5Q96JK2 942 aa23.83■■□□□ 1.41
PPP1CA-210ENST00000542876 AMOTQ4VCS5 1084 aa23.82■■□□□ 1.4
PPP1CA-210ENST00000542876 KNSTRNQ9Y448 316 aa23.81■■□□□ 1.4
PPP1CA-210ENST00000542876 SENP3-EIF4A1A0A087X0R7 540 aa23.8■■□□□ 1.4
PPP1CA-210ENST00000542876 ZNF530Q6P9A1 599 aaPredicted RBP23.8■■□□□ 1.4
PPP1CA-210ENST00000542876 RBM42Q9BTD8 480 aaKnown RBP23.8■■□□□ 1.4
PPP1CA-210ENST00000542876 CABP4P57796 275 aa23.79■■□□□ 1.4
PPP1CA-210ENST00000542876 C1orf141Q5JVX7 400 aa23.78■■□□□ 1.4
PPP1CA-210ENST00000542876 RTCBQ9Y3I0 505 aaKnown RBP23.78■■□□□ 1.4
PPP1CA-210ENST00000542876 UBR3Q6ZT12 1888 aa23.77■■□□□ 1.4
PPP1CA-210ENST00000542876 TRAPPC3LQ5T215 181 aa23.77■■□□□ 1.4
PPP1CA-210ENST00000542876 MTHFSP49914 203 aa23.76■■□□□ 1.39
PPP1CA-210ENST00000542876 KDRP35968 1356 aa23.74■■□□□ 1.39
PPP1CA-210ENST00000542876 MMP10P09238 476 aa23.73■■□□□ 1.39
PPP1CA-210ENST00000542876 RC3H1Q5TC82 1133 aaKnown RBP23.73■■□□□ 1.39
PPP1CA-210ENST00000542876 SULT6B1Q6IMI4 303 aa23.73■■□□□ 1.39
PPP1CA-210ENST00000542876 AEBP1Q8IUX7 1158 aa23.73■■□□□ 1.39
PPP1CA-210ENST00000542876 WWC3Q9ULE0 1092 aa23.73■■□□□ 1.39
PPP1CA-210ENST00000542876 ADRA2BP18089 450 aa23.72■■□□□ 1.39
PPP1CA-210ENST00000542876 NLGN1Q8N2Q7 840 aa23.72■■□□□ 1.39
PPP1CA-210ENST00000542876 SLC4A9Q96Q91 983 aa23.71■■□□□ 1.39
PPP1CA-210ENST00000542876 KDM6AO15550 1401 aaPredicted RBP23.7■■□□□ 1.38
PPP1CA-210ENST00000542876 ATP10DQ9P241 1426 aa23.7■■□□□ 1.38
PPP1CA-210ENST00000542876 CNTNAP4Q9C0A0 1308 aa23.7■■□□□ 1.38
PPP1CA-210ENST00000542876 RFC4P35249 363 aa23.7■■□□□ 1.38
PPP1CA-210ENST00000542876 PTCD1O75127 700 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-210ENST00000542876 ARHGEF1Q92888 912 aaKnown RBP23.69■■□□□ 1.38
PPP1CA-210ENST00000542876 GPBP1L1Q9HC44 474 aaPredicted RBP23.69■■□□□ 1.38
PPP1CA-210ENST00000542876 RPS6KA4O75676 772 aa23.68■■□□□ 1.38
PPP1CA-210ENST00000542876 IL13P35225 146 aa23.68■■□□□ 1.38
PPP1CA-210ENST00000542876 NFATC2IPQ8NCF5 419 aa23.68■■□□□ 1.38
PPP1CA-210ENST00000542876 TGFB2P61812 414 aa23.66■■□□□ 1.38
PPP1CA-210ENST00000542876 AMER1Q5JTC6 1135 aaPredicted RBP23.65■■□□□ 1.38
PPP1CA-210ENST00000542876 CCDC87Q9NVE4 849 aa23.65■■□□□ 1.38
PPP1CA-210ENST00000542876 PARP3Q9Y6F1 533 aa23.65■■□□□ 1.38
PPP1CA-210ENST00000542876 ZNF831Q5JPB2 1677 aa23.64■■□□□ 1.38
PPP1CA-210ENST00000542876 GYS1P13807 737 aa23.64■■□□□ 1.37
PPP1CA-210ENST00000542876 AKAP4Q5JQC9 854 aa23.64■■□□□ 1.37
PPP1CA-210ENST00000542876 ZNF526Q8TF50 670 aaPredicted RBP23.64■■□□□ 1.37
PPP1CA-210ENST00000542876 KIF7Q2M1P5 1343 aa23.63■■□□□ 1.37
PPP1CA-210ENST00000542876 CRKLP46109 303 aaKnown RBP23.62■■□□□ 1.37
PPP1CA-210ENST00000542876 ADCY9O60503 1353 aa23.62■■□□□ 1.37
PPP1CA-210ENST00000542876 BCS1LQ9Y276 419 aa23.61■■□□□ 1.37
PPP1CA-210ENST00000542876 CICQ96RK0 1608 aaPredicted RBP23.61■■□□□ 1.37
PPP1CA-210ENST00000542876 A0A0G2JLW4 131 aa23.6■■□□□ 1.37
PPP1CA-210ENST00000542876 PXDNLA1KZ92 1463 aa23.6■■□□□ 1.37
PPP1CA-210ENST00000542876 HMOX1P09601 288 aa23.59■■□□□ 1.37
PPP1CA-210ENST00000542876 SLC52A2Q9HAB3 445 aa23.59■■□□□ 1.37
PPP1CA-210ENST00000542876 C10orf71Q711Q0 1435 aa23.59■■□□□ 1.37
PPP1CA-210ENST00000542876 COL5A3P25940 1745 aaPredicted RBP23.57■■□□□ 1.36
PPP1CA-210ENST00000542876 CC2D1BQ5T0F9 858 aaKnown RBP23.57■■□□□ 1.36
PPP1CA-210ENST00000542876 DIAPH1O60610 1272 aaKnown RBP23.56■■□□□ 1.36
PPP1CA-210ENST00000542876 DPEP1P16444 411 aa23.56■■□□□ 1.36
PPP1CA-210ENST00000542876 RNMTO43148 476 aaKnown RBP23.55■■□□□ 1.36
PPP1CA-210ENST00000542876 FCHSD2O94868 740 aa23.55■■□□□ 1.36
PPP1CA-210ENST00000542876 LGR6Q9HBX8 967 aa23.55■■□□□ 1.36
PPP1CA-210ENST00000542876 SRP68Q9UHB9 627 aaKnown RBP23.55■■□□□ 1.36
PPP1CA-210ENST00000542876 USP42Q9H9J4 1324 aaKnown RBP23.55■■□□□ 1.36
PPP1CA-210ENST00000542876 ARHGAP27Q6ZUM4 889 aa23.54■■□□□ 1.36
PPP1CA-210ENST00000542876 C4AP0C0L4 1744 aa23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 PER1O15534 1290 aaPredicted RBP23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 ZPR1O75312 459 aa23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 FKBP8Q14318 412 aa23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 INTS5Q6P9B9 1019 aaKnown RBP23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 DNAJC10Q8IXB1 793 aa23.53■■□□□ 1.36
PPP1CA-210ENST00000542876 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
PPP1CA-210ENST00000542876 MTHFSDQ2M296 383 aaKnown RBP23.51■■□□□ 1.35
PPP1CA-210ENST00000542876 PIM2Q9P1W9 311 aa23.51■■□□□ 1.35
PPP1CA-210ENST00000542876 KIF13BQ9NQT8 1826 aa23.51■■□□□ 1.35
PPP1CA-210ENST00000542876 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
PPP1CA-210ENST00000542876 CNGB1Q14028 1251 aaPredicted RBP23.49■■□□□ 1.35
PPP1CA-210ENST00000542876 SCN11AQ9UI33 1791 aa23.49■■□□□ 1.35
PPP1CA-210ENST00000542876 U2SURPO15042 1029 aaKnown RBP23.48■■□□□ 1.35
PPP1CA-210ENST00000542876 CYP19A1P11511 503 aaPredicted RBP23.48■■□□□ 1.35
PPP1CA-210ENST00000542876 HSPA6P17066 643 aa23.48■■□□□ 1.35
PPP1CA-210ENST00000542876 DDR1Q08345 913 aa23.48■■□□□ 1.35
PPP1CA-210ENST00000542876 TJP1Q07157 1748 aa23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 N4BP2Q86UW6 1770 aaPredicted RBP23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 DALRD3Q5D0E6 543 aaKnown RBP23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 USPL1Q5W0Q7 1092 aa23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 TTC5Q8N0Z6 440 aa23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 SOS1Q07889 1333 aaPredicted RBP23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 MRC1P22897 1456 aa23.47■■□□□ 1.35
PPP1CA-210ENST00000542876 KCNA3P22001 575 aa23.46■■□□□ 1.35
PPP1CA-210ENST00000542876 VSIG10Q8N0Z9 540 aa23.46■■□□□ 1.35
PPP1CA-210ENST00000542876 KIAA1551Q9HCM1 1747 aa23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 POLRMTO00411 1230 aaKnown RBP23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 KIF3CO14782 793 aa23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 TM4SF1P30408 202 aa23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 CEP350Q5VT06 3117 aa23.45■■□□□ 1.34
PPP1CA-210ENST00000542876 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
PPP1CA-210ENST00000542876 COL15A1P39059 1388 aa23.43■■□□□ 1.34
PPP1CA-210ENST00000542876 STARD3NLO95772 234 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms