RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 PNPLA7Q6ZV29 1317 aa8.39□□□□□ -1.07
LRTOMT-220ENST00000542846 LOC102724428A0A0B4J2F2 783 aa8.39□□□□□ -1.07
LRTOMT-220ENST00000542846 SIK1P57059 783 aa8.39□□□□□ -1.07
LRTOMT-220ENST00000542846 GAS2L2Q8NHY3 880 aa8.39□□□□□ -1.07
LRTOMT-220ENST00000542846 ASAP1Q9ULH1 1129 aa8.39□□□□□ -1.07
LRTOMT-220ENST00000542846 UBR2Q8IWV8 1755 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 MAP3K5Q99683 1374 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 TJP1Q07157 1748 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 RNMTO43148 476 aaKnown RBP8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 FCHSD2O94868 740 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 ZBTB7AO95365 584 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 U2AF1L5P0DN76 240 aaPredicted RBP8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 PRKAR2BP31323 418 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 U2AF1Q01081 240 aaKnown RBP eCLIP8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 SLC16A10Q8TF71 515 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 MTFR1LQ9H019 292 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 SLC52A2Q9HAB3 445 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 TFCP2L1Q9NZI6 479 aa8.38□□□□□ -1.07
LRTOMT-220ENST00000542846 MYBBP1AQ9BQG0 1328 aaKnown RBP8.37□□□□□ -1.07
LRTOMT-220ENST00000542846 NFATC2IPQ8NCF5 419 aa8.37□□□□□ -1.07
LRTOMT-220ENST00000542846 LGR6Q9HBX8 967 aa8.37□□□□□ -1.07
LRTOMT-220ENST00000542846 KCPQ6ZWJ8 1503 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 GNAT3A8MTJ3 354 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 ATP6V1AP38606 617 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 PTGER2P43116 358 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 ITPK1Q13572 414 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 LINC00116Q8NCU8 138 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 FLAD1Q8NFF5 587 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 PHACTR3Q96KR7 559 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 AK7Q96M32 723 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 SLC4A9Q96Q91 983 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 SGIP1Q9BQI5 828 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 DLG5Q8TDM6 1919 aa8.36□□□□□ -1.07
LRTOMT-220ENST00000542846 CEMIPQ8WUJ3 1361 aa8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 COL23A1Q86Y22 540 aaPredicted RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 RBM42Q9BTD8 480 aaKnown RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 PRKRIP1Q9H875 184 aaPredicted RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 PPP1R1BQ9UD71 204 aaPredicted RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 ATF5Q9Y2D1 282 aaPredicted RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 MYH14Q7Z406 1995 aaKnown RBP8.35□□□□□ -1.07
LRTOMT-220ENST00000542846 CNTNAP4Q9C0A0 1308 aa8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 ZNF316A6NFI3 1004 aaPredicted RBP8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 SSFA2P28290 1259 aa8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 RC3H1Q5TC82 1133 aaKnown RBP8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 C4AP0C0L4 1744 aa8.34□□□□□ -1.07
LRTOMT-220ENST00000542846 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 GNPATO15228 680 aa8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 HTATSF1O43719 755 aaKnown RBP8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 NEFMP07197 916 aa8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 TEFQ10587 303 aa8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 AMIGO3Q86WK7 504 aa8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 PLEKHF1Q96S99 279 aa8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 PNNQ9H307 717 aaKnown RBP8.33□□□□□ -1.08
LRTOMT-220ENST00000542846 MSH5O43196 834 aa8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 POLD1P28340 1107 aa8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 SLC39A6Q13433 755 aa8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 VSIG10Q8N0Z9 540 aa8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 ARXQ96QS3 562 aa8.32□□□□□ -1.08
LRTOMT-220ENST00000542846 MAPK8IP3Q9UPT6 1336 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 KDM3BQ7LBC6 1761 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 RPS6KA4O75676 772 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 PHF14O94880 888 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 ADRA2BP18089 450 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 NFE2L2Q16236 605 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 ZNF790Q6PG37 636 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 DNAJC10Q8IXB1 793 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 RTCBQ9Y3I0 505 aaKnown RBP8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 HEG1Q9ULI3 1381 aa8.31□□□□□ -1.08
LRTOMT-220ENST00000542846 CRKLP46109 303 aaKnown RBP8.3□□□□□ -1.08
LRTOMT-220ENST00000542846 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
LRTOMT-220ENST00000542846 SMIM5Q71RC9 77 aa8.3□□□□□ -1.08
LRTOMT-220ENST00000542846 MCM10Q7L590 875 aa8.3□□□□□ -1.08
LRTOMT-220ENST00000542846 FHDC1Q9C0D6 1143 aaPredicted RBP8.3□□□□□ -1.08
LRTOMT-220ENST00000542846 BTBD11A6QL63 1104 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 DCTN1Q14203 1278 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 WDR43Q15061 677 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 ZNF496Q96IT1 587 aaPredicted RBP8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 FMNL2Q96PY5 1086 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 SYT17Q9BSW7 474 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 CCDC87Q9NVE4 849 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 LAMB4A4D0S4 1761 aa8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 SOS1Q07889 1333 aaPredicted RBP8.29□□□□□ -1.08
LRTOMT-220ENST00000542846 RFC4P35249 363 aa8.28□□□□□ -1.08
LRTOMT-220ENST00000542846 TAF7Q15545 349 aaPredicted RBP8.28□□□□□ -1.08
LRTOMT-220ENST00000542846 ARHGEF1Q92888 912 aaKnown RBP8.28□□□□□ -1.08
LRTOMT-220ENST00000542846 TEX13AQ9BXU3 409 aaPredicted RBP8.28□□□□□ -1.08
LRTOMT-220ENST00000542846 USP42Q9H9J4 1324 aaKnown RBP8.28□□□□□ -1.08
LRTOMT-220ENST00000542846 SCN7AQ01118 1682 aa8.27□□□□□ -1.08
LRTOMT-220ENST00000542846 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
LRTOMT-220ENST00000542846 COL15A1P39059 1388 aa8.27□□□□□ -1.09
LRTOMT-220ENST00000542846 KCNQ3O43525 872 aa8.27□□□□□ -1.09
LRTOMT-220ENST00000542846 STARD3NLO95772 234 aa8.27□□□□□ -1.09
LRTOMT-220ENST00000542846 GYS1P13807 737 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms