RNA–Protein interactions for RNA: ENST00000542791.1

MRPS35-205, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-205ENST00000542791 PHKG2P15735 406 aa10.7□□□□□ -0.7
MRPS35-205ENST00000542791 HMGB2P26583 209 aaKnown RBP10.7□□□□□ -0.7
MRPS35-205ENST00000542791 MORC1Q86VD1 984 aa10.7□□□□□ -0.7
MRPS35-205ENST00000542791 IFNL2Q8IZJ0 200 aa10.7□□□□□ -0.7
MRPS35-205ENST00000542791 KNSTRNQ9Y448 316 aa10.7□□□□□ -0.7
MRPS35-205ENST00000542791 YY1P25490 414 aa10.69□□□□□ -0.7
MRPS35-205ENST00000542791 POLD1P28340 1107 aa10.69□□□□□ -0.7
MRPS35-205ENST00000542791 COL23A1Q86Y22 540 aaPredicted RBP10.69□□□□□ -0.7
MRPS35-205ENST00000542791 CEP350Q5VT06 3117 aa10.68□□□□□ -0.7
MRPS35-205ENST00000542791 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
MRPS35-205ENST00000542791 TMOD3Q9NYL9 352 aa10.68□□□□□ -0.7
MRPS35-205ENST00000542791 TUBGCP6Q96RT7 1819 aa10.68□□□□□ -0.7
MRPS35-205ENST00000542791 KDRP35968 1356 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 PER1O15534 1290 aaPredicted RBP10.67□□□□□ -0.7
MRPS35-205ENST00000542791 SIK1P57059 783 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 FLAD1Q8NFF5 587 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 ASAP1Q9ULH1 1129 aa10.67□□□□□ -0.7
MRPS35-205ENST00000542791 ERVV-2B6SEH9 535 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 IL13P35225 146 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 AMOTQ4VCS5 1084 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 AMIGO3Q86WK7 504 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 AEBP1Q8IUX7 1158 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 DCAF5Q96JK2 942 aa10.66□□□□□ -0.7
MRPS35-205ENST00000542791 HSP90AB1P08238 724 aaKnown RBP10.65□□□□□ -0.7
MRPS35-205ENST00000542791 ITPK1Q13572 414 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 PLEKHO1Q53GL0 409 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-205ENST00000542791 LINC00116Q8NCU8 138 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 AK7Q96M32 723 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 ATG3Q9NT62 314 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 SSUH2Q9Y2M2 353 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 C5P01031 1676 aa10.65□□□□□ -0.7
MRPS35-205ENST00000542791 KDM6AO15550 1401 aaPredicted RBP10.65□□□□□ -0.7
MRPS35-205ENST00000542791 ITGB4P16144 1822 aa10.65□□□□□ -0.71
MRPS35-205ENST00000542791 SSFA2P28290 1259 aa10.64□□□□□ -0.71
MRPS35-205ENST00000542791 MSL1Q68DK7 614 aa10.64□□□□□ -0.71
MRPS35-205ENST00000542791 SULT6B1Q6IMI4 303 aa10.64□□□□□ -0.71
MRPS35-205ENST00000542791 ZNF530Q6P9A1 599 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-205ENST00000542791 SPDYE1Q8NFV5 336 aaPredicted RBP10.64□□□□□ -0.71
MRPS35-205ENST00000542791 NLGN2Q8NFZ4 835 aa10.64□□□□□ -0.71
MRPS35-205ENST00000542791 C4BP0C0L5 1744 aa10.64□□□□□ -0.71
MRPS35-205ENST00000542791 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.63□□□□□ -0.71
MRPS35-205ENST00000542791 SLC4A9Q96Q91 983 aa10.63□□□□□ -0.71
MRPS35-205ENST00000542791 NPC1L1Q9UHC9 1359 aa10.63□□□□□ -0.71
MRPS35-205ENST00000542791 TAF1LQ8IZX4 1826 aa10.63□□□□□ -0.71
MRPS35-205ENST00000542791 ATP6V1AP38606 617 aa10.62□□□□□ -0.71
MRPS35-205ENST00000542791 MTHFSP49914 203 aa10.62□□□□□ -0.71
MRPS35-205ENST00000542791 SMIM5Q71RC9 77 aa10.62□□□□□ -0.71
MRPS35-205ENST00000542791 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
MRPS35-205ENST00000542791 GNPATO15228 680 aa10.61□□□□□ -0.71
MRPS35-205ENST00000542791 PHF14O94880 888 aa10.61□□□□□ -0.71
MRPS35-205ENST00000542791 GPR162Q16538 588 aa10.61□□□□□ -0.71
MRPS35-205ENST00000542791 C1orf141Q5JVX7 400 aa10.61□□□□□ -0.71
MRPS35-205ENST00000542791 CD2APQ9Y5K6 639 aa10.61□□□□□ -0.71
MRPS35-205ENST00000542791 UBR3Q6ZT12 1888 aa10.6□□□□□ -0.71
MRPS35-205ENST00000542791 CABP4P57796 275 aa10.6□□□□□ -0.71
MRPS35-205ENST00000542791 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
MRPS35-205ENST00000542791 PIP4P2Q8N4L2 257 aa10.6□□□□□ -0.71
MRPS35-205ENST00000542791 ZNF784Q8NCA9 323 aaPredicted RBP10.6□□□□□ -0.71
MRPS35-205ENST00000542791 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
MRPS35-205ENST00000542791 AKAP4Q5JQC9 854 aa10.59□□□□□ -0.71
MRPS35-205ENST00000542791 RC3H1Q5TC82 1133 aaKnown RBP10.59□□□□□ -0.71
MRPS35-205ENST00000542791 CNTNAP4Q9C0A0 1308 aa10.58□□□□□ -0.71
MRPS35-205ENST00000542791 ZNF831Q5JPB2 1677 aa10.58□□□□□ -0.72
MRPS35-205ENST00000542791 COL3A1P02461 1466 aaPredicted RBP10.58□□□□□ -0.72
MRPS35-205ENST00000542791 DIAPH1O60610 1272 aaKnown RBP10.58□□□□□ -0.72
MRPS35-205ENST00000542791 YBX3P16989 372 aaKnown RBP eCLIP10.58□□□□□ -0.721e-6■□□□□ 10.1
MRPS35-205ENST00000542791 FXR2P51116 673 aaKnown RBP eCLIP10.58□□□□□ -0.72
MRPS35-205ENST00000542791 NFATC2IPQ8NCF5 419 aa10.58□□□□□ -0.72
MRPS35-205ENST00000542791 HMOX1P09601 288 aa10.57□□□□□ -0.72
MRPS35-205ENST00000542791 RTCBQ9Y3I0 505 aaKnown RBP10.57□□□□□ -0.72
MRPS35-205ENST00000542791 MRC1P22897 1456 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 GRIN3BO60391 1043 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 PTCD1O75127 700 aaKnown RBP10.56□□□□□ -0.72
MRPS35-205ENST00000542791 RPS6KA4O75676 772 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 TRAPPC3LQ5T215 181 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 PELP1Q8IZL8 1130 aaKnown RBP10.56□□□□□ -0.72
MRPS35-205ENST00000542791 ARHGEF1Q92888 912 aaKnown RBP10.56□□□□□ -0.72
MRPS35-205ENST00000542791 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 LGR6Q9HBX8 967 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 CLEC11AQ9Y240 323 aa10.56□□□□□ -0.72
MRPS35-205ENST00000542791 RNMTO43148 476 aaKnown RBP10.55□□□□□ -0.72
MRPS35-205ENST00000542791 MMP10P09238 476 aa10.55□□□□□ -0.72
MRPS35-205ENST00000542791 MTHFSDQ2M296 383 aaKnown RBP10.55□□□□□ -0.72
MRPS35-205ENST00000542791 CHD4Q14839 1912 aa10.54□□□□□ -0.72
MRPS35-205ENST00000542791 GYS1P13807 737 aa10.54□□□□□ -0.72
MRPS35-205ENST00000542791 COL5A3P25940 1745 aaPredicted RBP10.54□□□□□ -0.72
MRPS35-205ENST00000542791 CRKLP46109 303 aaKnown RBP10.54□□□□□ -0.72
MRPS35-205ENST00000542791 NLGN1Q8N2Q7 840 aa10.54□□□□□ -0.72
MRPS35-205ENST00000542791 CICQ96RK0 1608 aaPredicted RBP10.53□□□□□ -0.72
MRPS35-205ENST00000542791 MYH14Q7Z406 1995 aaKnown RBP10.53□□□□□ -0.72
MRPS35-205ENST00000542791 C10orf71Q711Q0 1435 aa10.52□□□□□ -0.73
MRPS35-205ENST00000542791 RFC4P35249 363 aa10.52□□□□□ -0.73
MRPS35-205ENST00000542791 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
MRPS35-205ENST00000542791 ADAMTS7Q9UKP4 1686 aa10.52□□□□□ -0.73
MRPS35-205ENST00000542791 SCN11AQ9UI33 1791 aa10.52□□□□□ -0.73
MRPS35-205ENST00000542791 PXDNLA1KZ92 1463 aa10.51□□□□□ -0.73
MRPS35-205ENST00000542791 U2SURPO15042 1029 aaKnown RBP10.51□□□□□ -0.73
MRPS35-205ENST00000542791 SLC39A6Q13433 755 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms