RNA–Protein interactions for RNA: ENST00000542452.1

C2CD3-217, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 956 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-217ENST00000542452 LGR6Q9HBX8 967 aa15.48■□□□□ 0.07
C2CD3-217ENST00000542452 ZBTB7AO95365 584 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 PRKAR2BP31323 418 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 ITPK1Q13572 414 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 AMIGO3Q86WK7 504 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 SMARCC1Q92922 1105 aaPredicted RBP15.47■□□□□ 0.07
C2CD3-217ENST00000542452 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 KCPQ6ZWJ8 1503 aa15.47■□□□□ 0.07
C2CD3-217ENST00000542452 MYH14Q7Z406 1995 aaKnown RBP15.46■□□□□ 0.07
C2CD3-217ENST00000542452 LOC102724428A0A0B4J2F2 783 aa15.46■□□□□ 0.07
C2CD3-217ENST00000542452 RNMTO43148 476 aaKnown RBP15.46■□□□□ 0.07
C2CD3-217ENST00000542452 SIK1P57059 783 aa15.46■□□□□ 0.07
C2CD3-217ENST00000542452 LINC00116Q8NCU8 138 aa15.46■□□□□ 0.07
C2CD3-217ENST00000542452 MAP3K5Q99683 1374 aa15.46■□□□□ 0.07
C2CD3-217ENST00000542452 U2AF1L5P0DN76 240 aaPredicted RBP15.45■□□□□ 0.06
C2CD3-217ENST00000542452 PTGER2P43116 358 aa15.45■□□□□ 0.06
C2CD3-217ENST00000542452 CABP4P57796 275 aa15.45■□□□□ 0.06
C2CD3-217ENST00000542452 U2AF1Q01081 240 aaKnown RBP eCLIP15.45■□□□□ 0.06
C2CD3-217ENST00000542452 RALBP1Q15311 655 aa15.45■□□□□ 0.06
C2CD3-217ENST00000542452 C4AP0C0L4 1744 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 NFATC2IPQ8NCF5 419 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 SGIP1Q9BQI5 828 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 SLC52A2Q9HAB3 445 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 SPON1Q9HCB6 807 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
C2CD3-217ENST00000542452 SMIM5Q71RC9 77 aa15.43■□□□□ 0.06
C2CD3-217ENST00000542452 GAS2L2Q8NHY3 880 aa15.43■□□□□ 0.06
C2CD3-217ENST00000542452 ATF5Q9Y2D1 282 aaPredicted RBP15.43■□□□□ 0.06
C2CD3-217ENST00000542452 MYBBP1AQ9BQG0 1328 aaKnown RBP15.43■□□□□ 0.06
C2CD3-217ENST00000542452 CEMIPQ8WUJ3 1361 aa15.42■□□□□ 0.06
C2CD3-217ENST00000542452 MTFR1LQ9H019 292 aa15.42■□□□□ 0.06
C2CD3-217ENST00000542452 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
C2CD3-217ENST00000542452 ATP6V1AP38606 617 aa15.41■□□□□ 0.06
C2CD3-217ENST00000542452 COL23A1Q86Y22 540 aaPredicted RBP15.41■□□□□ 0.06
C2CD3-217ENST00000542452 IL17REQ8NFR9 667 aa15.41■□□□□ 0.06
C2CD3-217ENST00000542452 FCHSD2O94868 740 aa15.4■□□□□ 0.06
C2CD3-217ENST00000542452 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
C2CD3-217ENST00000542452 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
C2CD3-217ENST00000542452 PRKRIP1Q9H875 184 aaPredicted RBP15.4■□□□□ 0.06
C2CD3-217ENST00000542452 GNAT3A8MTJ3 354 aa15.39■□□□□ 0.05
C2CD3-217ENST00000542452 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
C2CD3-217ENST00000542452 ZNF316A6NFI3 1004 aaPredicted RBP15.38■□□□□ 0.05
C2CD3-217ENST00000542452 PTCD1O75127 700 aaKnown RBP15.38■□□□□ 0.05
C2CD3-217ENST00000542452 AK7Q96M32 723 aa15.38■□□□□ 0.05
C2CD3-217ENST00000542452 KDM3BQ7LBC6 1761 aa15.37■□□□□ 0.05
C2CD3-217ENST00000542452 PHF14O94880 888 aa15.37■□□□□ 0.05
C2CD3-217ENST00000542452 CNTNAP4Q9C0A0 1308 aa15.37■□□□□ 0.05
C2CD3-217ENST00000542452 GNPATO15228 680 aa15.36■□□□□ 0.05
C2CD3-217ENST00000542452 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.35■□□□□ 0.05
C2CD3-217ENST00000542452 DCTN1Q14203 1278 aa15.35■□□□□ 0.05
C2CD3-217ENST00000542452 MSL1Q68DK7 614 aa15.35■□□□□ 0.05
C2CD3-217ENST00000542452 MCM10Q7L590 875 aa15.35■□□□□ 0.05
C2CD3-217ENST00000542452 SLC16A10Q8TF71 515 aa15.35■□□□□ 0.05
C2CD3-217ENST00000542452 SSFA2P28290 1259 aa15.34■□□□□ 0.05
C2CD3-217ENST00000542452 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
C2CD3-217ENST00000542452 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
C2CD3-217ENST00000542452 MSH5O43196 834 aa15.33■□□□□ 0.04
C2CD3-217ENST00000542452 KCNQ3O43525 872 aa15.33■□□□□ 0.04
C2CD3-217ENST00000542452 LAMB4A4D0S4 1761 aa15.33■□□□□ 0.04
C2CD3-217ENST00000542452 CRKLP46109 303 aaKnown RBP15.32■□□□□ 0.04
C2CD3-217ENST00000542452 TEFQ10587 303 aa15.32■□□□□ 0.04
C2CD3-217ENST00000542452 RC3H1Q5TC82 1133 aaKnown RBP15.32■□□□□ 0.04
C2CD3-217ENST00000542452 FHDC1Q9C0D6 1143 aaPredicted RBP15.32■□□□□ 0.04
C2CD3-217ENST00000542452 NFE2L2Q16236 605 aa15.31■□□□□ 0.04
C2CD3-217ENST00000542452 ZNF790Q6PG37 636 aa15.31■□□□□ 0.04
C2CD3-217ENST00000542452 FLAD1Q8NFF5 587 aa15.31■□□□□ 0.04
C2CD3-217ENST00000542452 ZNF496Q96IT1 587 aaPredicted RBP15.31■□□□□ 0.04
C2CD3-217ENST00000542452 ARXQ96QS3 562 aa15.31■□□□□ 0.04
C2CD3-217ENST00000542452 RPS6KA4O75676 772 aa15.3■□□□□ 0.04
C2CD3-217ENST00000542452 SCN7AQ01118 1682 aa15.3■□□□□ 0.04
C2CD3-217ENST00000542452 CCDC184Q52MB2 194 aa15.3■□□□□ 0.04
C2CD3-217ENST00000542452 INTS5Q6P9B9 1019 aaKnown RBP15.3■□□□□ 0.04
C2CD3-217ENST00000542452 THUMPD2Q9BTF0 503 aaKnown RBP15.3■□□□□ 0.04
C2CD3-217ENST00000542452 KIAA1551Q9HCM1 1747 aa15.3■□□□□ 0.04
C2CD3-217ENST00000542452 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
C2CD3-217ENST00000542452 MAPK8IP3Q9UPT6 1336 aa15.29■□□□□ 0.04
C2CD3-217ENST00000542452 HTATSF1O43719 755 aaKnown RBP15.29■□□□□ 0.04
C2CD3-217ENST00000542452 CYP19A1P11511 503 aaPredicted RBP15.29■□□□□ 0.04
C2CD3-217ENST00000542452 HMGB2P26583 209 aaKnown RBP15.29■□□□□ 0.04
C2CD3-217ENST00000542452 CCDC146Q8IYE0 955 aa15.29■□□□□ 0.04
C2CD3-217ENST00000542452 ZBTB1Q9Y2K1 713 aa15.29■□□□□ 0.04
C2CD3-217ENST00000542452 RTCBQ9Y3I0 505 aaKnown RBP15.29■□□□□ 0.04
C2CD3-217ENST00000542452 KIF13BQ9NQT8 1826 aa15.29■□□□□ 0.04
C2CD3-217ENST00000542452 SOS1Q07889 1333 aaPredicted RBP15.28■□□□□ 0.04
C2CD3-217ENST00000542452 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 POLD1P28340 1107 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 TTC5Q8N0Z6 440 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 VSIG10Q8N0Z9 540 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 RTF1Q92541 710 aaKnown RBP15.28■□□□□ 0.04
C2CD3-217ENST00000542452 ARHGEF1Q92888 912 aaKnown RBP15.28■□□□□ 0.04
C2CD3-217ENST00000542452 SYT17Q9BSW7 474 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 BCORQ6W2J9 1755 aa15.28■□□□□ 0.04
C2CD3-217ENST00000542452 CCDC87Q9NVE4 849 aa15.27■□□□□ 0.04
C2CD3-217ENST00000542452 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
C2CD3-217ENST00000542452 COL15A1P39059 1388 aa15.26■□□□□ 0.03
C2CD3-217ENST00000542452 PRAMEF22A3QJZ6 481 aa15.26■□□□□ 0.03
C2CD3-217ENST00000542452 ADRA2BP18089 450 aa15.26■□□□□ 0.03
C2CD3-217ENST00000542452 SRP68Q9UHB9 627 aaKnown RBP15.26■□□□□ 0.03
C2CD3-217ENST00000542452 USP42Q9H9J4 1324 aaKnown RBP15.25■□□□□ 0.03
C2CD3-217ENST00000542452 GYS1P13807 737 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms