RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 SMC1BQ8NDV3 1235 aa22.37■■□□□ 1.17
PAAF1-211ENST00000542293 PIGBQ92521 554 aa22.37■■□□□ 1.17
PAAF1-211ENST00000542293 LOC102724428A0A0B4J2F2 783 aa22.36■■□□□ 1.17
PAAF1-211ENST00000542293 KCNA3P22001 575 aa22.36■■□□□ 1.17
PAAF1-211ENST00000542293 SIK1P57059 783 aa22.36■■□□□ 1.17
PAAF1-211ENST00000542293 SBF1O95248 1867 aa22.36■■□□□ 1.17
PAAF1-211ENST00000542293 ITPK1Q13572 414 aa22.35■■□□□ 1.17
PAAF1-211ENST00000542293 TERF2IPQ9NYB0 399 aa22.35■■□□□ 1.17
PAAF1-211ENST00000542293 C4AP0C0L4 1744 aa22.34■■□□□ 1.17
PAAF1-211ENST00000542293 COG3Q96JB2 828 aa22.34■■□□□ 1.17
PAAF1-211ENST00000542293 RNF181Q9P0P0 153 aa22.34■■□□□ 1.17
PAAF1-211ENST00000542293 RTL1A6NKG5 1358 aa22.33■■□□□ 1.17
PAAF1-211ENST00000542293 RRS1Q15050 365 aaKnown RBP22.31■■□□□ 1.16
PAAF1-211ENST00000542293 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
PAAF1-211ENST00000542293 CCDC87Q9NVE4 849 aa22.31■■□□□ 1.16
PAAF1-211ENST00000542293 NLGN1Q8N2Q7 840 aa22.3■■□□□ 1.16
PAAF1-211ENST00000542293 TMF1P82094 1093 aa22.29■■□□□ 1.16
PAAF1-211ENST00000542293 ATP6V1AP38606 617 aa22.28■■□□□ 1.16
PAAF1-211ENST00000542293 ASAP1Q9ULH1 1129 aa22.28■■□□□ 1.16
PAAF1-211ENST00000542293 SMG6Q86US8 1419 aaKnown RBP22.27■■□□□ 1.16
PAAF1-211ENST00000542293 PIM2Q9P1W9 311 aa22.27■■□□□ 1.16
PAAF1-211ENST00000542293 NKX1-1Q15270 411 aaPredicted RBP22.26■■□□□ 1.15
PAAF1-211ENST00000542293 TRAPPC3LQ5T215 181 aa22.25■■□□□ 1.15
PAAF1-211ENST00000542293 GYS1P13807 737 aa22.24■■□□□ 1.15
PAAF1-211ENST00000542293 DALRD3Q5D0E6 543 aaKnown RBP22.24■■□□□ 1.15
PAAF1-211ENST00000542293 ARHGEF1Q92888 912 aaKnown RBP22.24■■□□□ 1.15
PAAF1-211ENST00000542293 RTCBQ9Y3I0 505 aaKnown RBP22.24■■□□□ 1.15
PAAF1-211ENST00000542293 PARP3Q9Y6F1 533 aa22.24■■□□□ 1.15
PAAF1-211ENST00000542293 HSP90AB2PQ58FF8 381 aa22.23■■□□□ 1.15
PAAF1-211ENST00000542293 TMOD3Q9NYL9 352 aa22.22■■□□□ 1.15
PAAF1-211ENST00000542293 ATG3Q9NT62 314 aa22.21■■□□□ 1.15
PAAF1-211ENST00000542293 INSRP06213 1382 aa22.21■■□□□ 1.15
PAAF1-211ENST00000542293 VEGFAP15692 232 aaPredicted RBP22.2■■□□□ 1.14
PAAF1-211ENST00000542293 KDRP35968 1356 aa22.2■■□□□ 1.14
PAAF1-211ENST00000542293 COL5A3P25940 1745 aaPredicted RBP22.2■■□□□ 1.14
PAAF1-211ENST00000542293 FOXN1O15353 648 aa22.19■■□□□ 1.14
PAAF1-211ENST00000542293 RASSF7Q02833 373 aa22.19■■□□□ 1.14
PAAF1-211ENST00000542293 PUS7Q96PZ0 661 aaKnown RBP22.19■■□□□ 1.14
PAAF1-211ENST00000542293 SLC4A9Q96Q91 983 aa22.19■■□□□ 1.14
PAAF1-211ENST00000542293 KDM6AO15550 1401 aaPredicted RBP22.19■■□□□ 1.14
PAAF1-211ENST00000542293 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
PAAF1-211ENST00000542293 GLTPD2A6NH11 291 aa22.18■■□□□ 1.14
PAAF1-211ENST00000542293 CHRNA5P30532 468 aa22.18■■□□□ 1.14
PAAF1-211ENST00000542293 RFC4P35249 363 aa22.17■■□□□ 1.14
PAAF1-211ENST00000542293 PCDH10Q9P2E7 1040 aa22.17■■□□□ 1.14
PAAF1-211ENST00000542293 MYH14Q7Z406 1995 aaKnown RBP22.17■■□□□ 1.14
PAAF1-211ENST00000542293 ZNF831Q5JPB2 1677 aa22.17■■□□□ 1.14
PAAF1-211ENST00000542293 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
PAAF1-211ENST00000542293 GGNBP2Q9H3C7 697 aa22.16■■□□□ 1.14
PAAF1-211ENST00000542293 PRDM10Q9NQV6 1147 aa22.16■■□□□ 1.14
PAAF1-211ENST00000542293 CCDC88AQ3V6T2 1871 aa22.15■■□□□ 1.14
PAAF1-211ENST00000542293 NCAPD2Q15021 1401 aa22.15■■□□□ 1.14
PAAF1-211ENST00000542293 FLT4P35916 1363 aa22.15■■□□□ 1.14
PAAF1-211ENST00000542293 TIAM2Q8IVF5 1701 aa22.15■■□□□ 1.14
PAAF1-211ENST00000542293 RC3H1Q5TC82 1133 aaKnown RBP22.15■■□□□ 1.14
PAAF1-211ENST00000542293 MKRN1Q9UHC7 482 aaKnown RBP22.15■■□□□ 1.14
PAAF1-211ENST00000542293 POTECB2RU33 542 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 FYB1O15117 783 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 RPS6KA4O75676 772 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 DDR1Q08345 913 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 FAM161AQ3B820 660 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 CARD11Q9BXL7 1154 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 SPG7Q9UQ90 795 aa22.14■■□□□ 1.13
PAAF1-211ENST00000542293 CNTNAP4Q9C0A0 1308 aa22.13■■□□□ 1.13
PAAF1-211ENST00000542293 LMNB1P20700 586 aa22.12■■□□□ 1.13
PAAF1-211ENST00000542293 CREBZFQ9NS37 354 aa22.11■■□□□ 1.13
PAAF1-211ENST00000542293 SRP68Q9UHB9 627 aaKnown RBP22.11■■□□□ 1.13
PAAF1-211ENST00000542293 PHKG2P15735 406 aa22.1■■□□□ 1.13
PAAF1-211ENST00000542293 FKBP8Q14318 412 aa22.1■■□□□ 1.13
PAAF1-211ENST00000542293 RBM42Q9BTD8 480 aaKnown RBP22.1■■□□□ 1.13
PAAF1-211ENST00000542293 KIF24Q5T7B8 1368 aa22.1■■□□□ 1.13
PAAF1-211ENST00000542293 IFNL2Q8IZJ0 200 aa22.08■■□□□ 1.13
PAAF1-211ENST00000542293 CTCFP49711 727 aaPredicted RBP22.07■■□□□ 1.12
PAAF1-211ENST00000542293 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.12
PAAF1-211ENST00000542293 NEUROD1Q13562 356 aa22.06■■□□□ 1.12
PAAF1-211ENST00000542293 EMILIN1Q9Y6C2 1016 aa22.06■■□□□ 1.12
PAAF1-211ENST00000542293 CNTNAP1P78357 1384 aa22.06■■□□□ 1.12
PAAF1-211ENST00000542293 TONSLQ96HA7 1378 aa22.06■■□□□ 1.12
PAAF1-211ENST00000542293 KIF20BQ96Q89 1820 aa22.06■■□□□ 1.12
PAAF1-211ENST00000542293 USP42Q9H9J4 1324 aaKnown RBP22.06■■□□□ 1.12
PAAF1-211ENST00000542293 POLRMTO00411 1230 aaKnown RBP22.05■■□□□ 1.12
PAAF1-211ENST00000542293 ABHD8Q96I13 439 aa22.05■■□□□ 1.12
PAAF1-211ENST00000542293 DLEC1Q9Y238 1755 aa22.04■■□□□ 1.12
PAAF1-211ENST00000542293 TESK2Q96S53 571 aa22.04■■□□□ 1.12
PAAF1-211ENST00000542293 AFDNP55196 1824 aaKnown RBP22.03■■□□□ 1.12
PAAF1-211ENST00000542293 VIRMAQ69YN4 1812 aaKnown RBP22.03■■□□□ 1.12
PAAF1-211ENST00000542293 TM4SF1P30408 202 aa22.03■■□□□ 1.12
PAAF1-211ENST00000542293 CHADLQ6NUI6 762 aa22.03■■□□□ 1.12
PAAF1-211ENST00000542293 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
PAAF1-211ENST00000542293 NFKBIEO00221 500 aa22.02■■□□□ 1.12
PAAF1-211ENST00000542293 POTEIP0CG38 1075 aa22.02■■□□□ 1.12
PAAF1-211ENST00000542293 POTEJP0CG39 1038 aa22.02■■□□□ 1.12
PAAF1-211ENST00000542293 LBX1P52954 281 aa22.02■■□□□ 1.12
PAAF1-211ENST00000542293 EYA1Q99502 592 aa22.02■■□□□ 1.12
PAAF1-211ENST00000542293 AIDAQ96BJ3 306 aa22.01■■□□□ 1.11
PAAF1-211ENST00000542293 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
PAAF1-211ENST00000542293 CRKLP46109 303 aaKnown RBP22■■□□□ 1.11
PAAF1-211ENST00000542293 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
PAAF1-211ENST00000542293 ERVV-2B6SEH9 535 aa21.99■■□□□ 1.11
PAAF1-211ENST00000542293 VEGFBP49765 207 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms