RNA–Protein interactions for RNA: ENST00000542180.5

SUPT20H-224, Transcript of SPT20 homolog, SAGA complex component, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SUPT20H, Length 2,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-224ENST00000542180 CWC15Q9P013 229 aaKnown RBP8.61□□□□□ -1.03
SUPT20H-224ENST00000542180 EXOC6BQ9Y2D4 811 aa8.61□□□□□ -1.03
SUPT20H-224ENST00000542180 RRP15Q9Y3B9 282 aaKnown RBP8.61□□□□□ -1.03
SUPT20H-224ENST00000542180 EXOSC9Q06265 439 aaKnown RBP8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 E2F4Q16254 413 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 SRLQ86TD4 932 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 ARHGEF1Q92888 912 aaKnown RBP8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 RNF39Q9H2S5 420 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 CCDC141Q6ZP82 1450 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 TDRD9Q8NDG6 1382 aaKnown RBP8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 NEK4P51957 841 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 TPM4P67936 248 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 TSGA10IPQ3SY00 556 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 TTC31Q49AM3 519 aaPredicted RBP8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 PACS2Q86VP3 889 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 GCC1Q96CN9 775 aa8.6□□□□□ -1.03
SUPT20H-224ENST00000542180 SLU7O95391 586 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 CLCN6P51797 869 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 GPS2Q13227 327 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 ERCC6LQ2NKX8 1250 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 INTS3Q68E01 1043 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 TMED8Q6PL24 325 aaPredicted RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 FUCA2Q9BTY2 467 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 DEF6Q9H4E7 631 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 ZCCHC17Q9NP64 241 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 CNPY2Q9Y2B0 182 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 SPAG9O60271 1321 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 ERBB3P21860 1342 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 USP27XA6NNY8 438 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 PYGBP11216 843 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 H2AFXP16104 143 aaPredicted RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 ATP2B1P20020 1258 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 PTPN14Q15678 1187 aa8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 DNAJC21Q5F1R6 531 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 EIF4G3O43432 1585 aaKnown RBP8.59□□□□□ -1.03
SUPT20H-224ENST00000542180 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 EGFL6Q8IUX8 553 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 CXorf56Q9H5V9 222 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 CFDP1Q9UEE9 299 aaPredicted RBP8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 PPIP5K1Q6PFW1 1433 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 RNF20Q5VTR2 975 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 LUZP1Q86V48 1076 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 RASEFQ8IZ41 740 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 CACTINQ8WUQ7 758 aaKnown RBP8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 FAM212AQ96EL1 285 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 DONSONQ9NYP3 566 aa8.58□□□□□ -1.04
SUPT20H-224ENST00000542180 PDS5BQ9NTI5 1447 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 UBE2HP62256 183 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 FBXO18Q8NFZ0 1043 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 TRIM5Q9C035 493 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 PLB1Q6P1J6 1458 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 KANK1Q14678 1352 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC192P0DO97 292 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 SATB1Q01826 763 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC91Q7Z6B0 441 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 GOLGA5Q8TBA6 731 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 SRCIN1Q9C0H9 1055 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 TRMT1Q9NXH9 659 aaKnown RBP8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 SUFUQ9UMX1 484 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 RAD50Q92878 1312 aa8.57□□□□□ -1.04
SUPT20H-224ENST00000542180 ABCC10Q5T3U5 1492 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 IPO8O15397 1037 aaKnown RBP8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 FIBPO43427 364 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 TTC22Q5TAA0 569 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 CASC1Q6TDU7 716 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 LRRN4CLQ8ND94 238 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC171Q6TFL3 1326 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 WDR33Q9C0J8 1336 aaKnown RBP8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 PLEKHG2Q9H7P9 1386 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 A2MP01023 1474 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 CT47B1P0C2W7 299 aaPredicted RBP8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 OAS2P29728 719 aaKnown RBP8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 MAGEA9P43362 315 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 LMAN1P49257 510 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 CUL4AQ13619 759 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC27Q2M243 656 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 ARHGAP29Q52LW3 1261 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 TMCO3Q6UWJ1 677 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 TMEM87AQ8NBN3 555 aa8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 POLR3AO14802 1390 aaPredicted RBP8.56□□□□□ -1.04
SUPT20H-224ENST00000542180 UHRF1BP1LA0JNW5 1464 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 TDO2P48775 406 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 ZNF75DP51815 510 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 MKRN3Q13064 507 aaKnown RBP8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC144BQ3MJ40 725 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 NYAP1Q6ZVC0 841 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 CCDC144CPQ8IYA2 1237 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 C16orf71Q8IYS4 520 aaPredicted RBP8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 FAM200AQ8TCP9 573 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 AK7Q96M32 723 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 CLIP2Q9UDT6 1046 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 IQSEC2Q5JU85 1478 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 SCAF11Q99590 1463 aaKnown RBP8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 SIRT2Q8IXJ6 389 aa8.55□□□□□ -1.04
SUPT20H-224ENST00000542180 SYNMO15061 1565 aa8.54□□□□□ -1.04
SUPT20H-224ENST00000542180 LAMC1P11047 1609 aa8.54□□□□□ -1.04
SUPT20H-224ENST00000542180 CUL7Q14999 1698 aa8.54□□□□□ -1.04
SUPT20H-224ENST00000542180 ITSN2Q9NZM3 1697 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms