RNA–Protein interactions for RNA: ENST00000542150.5

COPS7A-213, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-213ENST00000542150 GNPATO15228 680 aa16.81■□□□□ 0.28
COPS7A-213ENST00000542150 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
COPS7A-213ENST00000542150 CLSPNQ9HAW4 1339 aa16.78■□□□□ 0.28
COPS7A-213ENST00000542150 TNNT2P45379 298 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-213ENST00000542150 RC3H1Q5TC82 1133 aaKnown RBP16.78■□□□□ 0.28
COPS7A-213ENST00000542150 GPBP1L1Q9HC44 474 aaPredicted RBP16.78■□□□□ 0.28
COPS7A-213ENST00000542150 MMP10P09238 476 aa16.77■□□□□ 0.28
COPS7A-213ENST00000542150 DCAF5Q96JK2 942 aa16.77■□□□□ 0.28
COPS7A-213ENST00000542150 TRAPPC3LQ5T215 181 aa16.76■□□□□ 0.27
COPS7A-213ENST00000542150 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
COPS7A-213ENST00000542150 PANK3Q9H999 370 aa16.76■□□□□ 0.27
COPS7A-213ENST00000542150 WWC3Q9ULE0 1092 aa16.76■□□□□ 0.27
COPS7A-213ENST00000542150 CNTNAP4Q9C0A0 1308 aa16.75■□□□□ 0.27
COPS7A-213ENST00000542150 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
COPS7A-213ENST00000542150 HSP90AB1P08238 724 aaKnown RBP16.75■□□□□ 0.27
COPS7A-213ENST00000542150 TGFB2P61812 414 aa16.75■□□□□ 0.27
COPS7A-213ENST00000542150 NLGN1Q8N2Q7 840 aa16.75■□□□□ 0.27
COPS7A-213ENST00000542150 RTCBQ9Y3I0 505 aaKnown RBP16.75■□□□□ 0.27
COPS7A-213ENST00000542150 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
COPS7A-213ENST00000542150 RPS6KA4O75676 772 aa16.74■□□□□ 0.27
COPS7A-213ENST00000542150 GYS1P13807 737 aa16.74■□□□□ 0.27
COPS7A-213ENST00000542150 ADRA2BP18089 450 aa16.74■□□□□ 0.27
COPS7A-213ENST00000542150 PLEKHO1Q53GL0 409 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-213ENST00000542150 CICQ96RK0 1608 aaPredicted RBP16.74■□□□□ 0.27
COPS7A-213ENST00000542150 ZNF831Q5JPB2 1677 aa16.73■□□□□ 0.27
COPS7A-213ENST00000542150 KIF3CO14782 793 aa16.73■□□□□ 0.27
COPS7A-213ENST00000542150 AMOTQ4VCS5 1084 aa16.73■□□□□ 0.27
COPS7A-213ENST00000542150 ZNF526Q8TF50 670 aaPredicted RBP16.73■□□□□ 0.27
COPS7A-213ENST00000542150 C10orf71Q711Q0 1435 aa16.72■□□□□ 0.27
COPS7A-213ENST00000542150 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
COPS7A-213ENST00000542150 HSPA6P17066 643 aa16.72■□□□□ 0.27
COPS7A-213ENST00000542150 AEBP1Q8IUX7 1158 aa16.72■□□□□ 0.27
COPS7A-213ENST00000542150 POLR3GLQ9BT43 218 aa16.72■□□□□ 0.27
COPS7A-213ENST00000542150 RBM42Q9BTD8 480 aaKnown RBP16.72■□□□□ 0.27
COPS7A-213ENST00000542150 A0A0G2JLW4 131 aa16.71■□□□□ 0.27
COPS7A-213ENST00000542150 CABP4P57796 275 aa16.71■□□□□ 0.27
COPS7A-213ENST00000542150 EIF4G2P78344 907 aaKnown RBP eCLIP16.71■□□□□ 0.27
COPS7A-213ENST00000542150 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
COPS7A-213ENST00000542150 KIAA1551Q9HCM1 1747 aa16.7■□□□□ 0.26
COPS7A-213ENST00000542150 KCNA3P22001 575 aa16.7■□□□□ 0.26
COPS7A-213ENST00000542150 KIF13BQ9NQT8 1826 aa16.7■□□□□ 0.26
COPS7A-213ENST00000542150 DPEP1P16444 411 aa16.69■□□□□ 0.26
COPS7A-213ENST00000542150 IL13P35225 146 aa16.69■□□□□ 0.26
COPS7A-213ENST00000542150 MTHFSP49914 203 aa16.69■□□□□ 0.26
COPS7A-213ENST00000542150 RFC4P35249 363 aa16.68■□□□□ 0.26
COPS7A-213ENST00000542150 IFFO2Q5TF58 517 aa16.68■□□□□ 0.26
COPS7A-213ENST00000542150 NFATC2IPQ8NCF5 419 aa16.68■□□□□ 0.26
COPS7A-213ENST00000542150 CCDC87Q9NVE4 849 aa16.68■□□□□ 0.26
COPS7A-213ENST00000542150 BCS1LQ9Y276 419 aa16.68■□□□□ 0.26
COPS7A-213ENST00000542150 PTCD1O75127 700 aaKnown RBP16.67■□□□□ 0.26
COPS7A-213ENST00000542150 CRKLP46109 303 aaKnown RBP16.67■□□□□ 0.26
COPS7A-213ENST00000542150 SULT6B1Q6IMI4 303 aa16.67■□□□□ 0.26
COPS7A-213ENST00000542150 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
COPS7A-213ENST00000542150 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
COPS7A-213ENST00000542150 INTS5Q6P9B9 1019 aaKnown RBP16.66■□□□□ 0.26
COPS7A-213ENST00000542150 PARP3Q9Y6F1 533 aa16.66■□□□□ 0.26
COPS7A-213ENST00000542150 FKBP8Q14318 412 aa16.65■□□□□ 0.26
COPS7A-213ENST00000542150 C1orf141Q5JVX7 400 aa16.65■□□□□ 0.26
COPS7A-213ENST00000542150 PCGF6Q9BYE7 350 aa16.65■□□□□ 0.26
COPS7A-213ENST00000542150 SRP68Q9UHB9 627 aaKnown RBP16.65■□□□□ 0.26
COPS7A-213ENST00000542150 C4AP0C0L4 1744 aa16.65■□□□□ 0.26
COPS7A-213ENST00000542150 MYH14Q7Z406 1995 aaKnown RBP16.64■□□□□ 0.25
COPS7A-213ENST00000542150 FCHSD2O94868 740 aa16.64■□□□□ 0.25
COPS7A-213ENST00000542150 DDR1Q08345 913 aa16.64■□□□□ 0.25
COPS7A-213ENST00000542150 AMER1Q5JTC6 1135 aaPredicted RBP16.64■□□□□ 0.25
COPS7A-213ENST00000542150 USP42Q9H9J4 1324 aaKnown RBP16.64■□□□□ 0.25
COPS7A-213ENST00000542150 TM4SF1P30408 202 aa16.63■□□□□ 0.25
COPS7A-213ENST00000542150 ARHGAP27Q6ZUM4 889 aa16.63■□□□□ 0.25
COPS7A-213ENST00000542150 AKAP4Q5JQC9 854 aa16.62■□□□□ 0.25
COPS7A-213ENST00000542150 N4BP2Q86UW6 1770 aaPredicted RBP16.61■□□□□ 0.25
COPS7A-213ENST00000542150 TOMM70O94826 608 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 DNAJC5GQ8N7S2 189 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 SLC52A2Q9HAB3 445 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 KNSTRNQ9Y448 316 aa16.61■□□□□ 0.25
COPS7A-213ENST00000542150 POLRMTO00411 1230 aaKnown RBP16.6■□□□□ 0.25
COPS7A-213ENST00000542150 NMRK2Q9NPI5 230 aa16.6■□□□□ 0.25
COPS7A-213ENST00000542150 ADAMTS7Q9UKP4 1686 aa16.59■□□□□ 0.25
COPS7A-213ENST00000542150 CYP19A1P11511 503 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-213ENST00000542150 C9orf131Q5VYM1 1079 aa16.59■□□□□ 0.25
COPS7A-213ENST00000542150 DNAJC10Q8IXB1 793 aa16.59■□□□□ 0.25
COPS7A-213ENST00000542150 SOS1Q07889 1333 aaPredicted RBP16.59■□□□□ 0.25
COPS7A-213ENST00000542150 TJP1Q07157 1748 aa16.59■□□□□ 0.25
COPS7A-213ENST00000542150 PER1O15534 1290 aaPredicted RBP16.58■□□□□ 0.24
COPS7A-213ENST00000542150 RNMTO43148 476 aaKnown RBP16.58■□□□□ 0.24
COPS7A-213ENST00000542150 APLP1P51693 650 aa16.58■□□□□ 0.24
COPS7A-213ENST00000542150 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
COPS7A-213ENST00000542150 BRCA1P38398 1863 aaKnown RBP16.58■□□□□ 0.24
COPS7A-213ENST00000542150 MRC1P22897 1456 aa16.57■□□□□ 0.24
COPS7A-213ENST00000542150 CHRNA5P30532 468 aa16.57■□□□□ 0.24
COPS7A-213ENST00000542150 SLC39A6Q13433 755 aa16.56■□□□□ 0.24
COPS7A-213ENST00000542150 USPL1Q5W0Q7 1092 aa16.56■□□□□ 0.24
COPS7A-213ENST00000542150 BCL2L12Q9HB09 334 aa16.56■□□□□ 0.24
COPS7A-213ENST00000542150 MTHFSDQ2M296 383 aaKnown RBP16.55■□□□□ 0.24
COPS7A-213ENST00000542150 RBM46Q8TBY0 533 aaKnown RBP16.55■□□□□ 0.24
COPS7A-213ENST00000542150 NARFQ9UHQ1 456 aa16.55■□□□□ 0.24
COPS7A-213ENST00000542150 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
COPS7A-213ENST00000542150 KIF7Q2M1P5 1343 aa16.54■□□□□ 0.24
COPS7A-213ENST00000542150 HMOX1P09601 288 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms