RNA–Protein interactions for RNA: ENST00000541968.1

RAP1B-226, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 3

Gene RAP1B, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-226ENST00000541968 GNASQ5JWF2 1037 aa9.66□□□□□ -0.86
RAP1B-226ENST00000541968 RNFT1Q5M7Z0 435 aa9.66□□□□□ -0.86
RAP1B-226ENST00000541968 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
RAP1B-226ENST00000541968 DBN1Q16643 649 aa9.65□□□□□ -0.86
RAP1B-226ENST00000541968 TRIM22Q8IYM9 498 aa9.65□□□□□ -0.86
RAP1B-226ENST00000541968 FNBP4Q8N3X1 1017 aaPredicted RBP9.65□□□□□ -0.86
RAP1B-226ENST00000541968 ZNF837Q96EG3 531 aaPredicted RBP9.65□□□□□ -0.86
RAP1B-226ENST00000541968 USP17L5A8MUK1 530 aa9.64□□□□□ -0.87
RAP1B-226ENST00000541968 LZTS3O60299 673 aaPredicted RBP9.64□□□□□ -0.87
RAP1B-226ENST00000541968 C4orf17Q53FE4 359 aa9.64□□□□□ -0.87
RAP1B-226ENST00000541968 SERTAD1Q9UHV2 236 aa9.64□□□□□ -0.87
RAP1B-226ENST00000541968 PCDHGA11Q9Y5H2 935 aa9.64□□□□□ -0.87
RAP1B-226ENST00000541968 FAM181BA6NEQ2 426 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 TMEM229AB2RXF0 380 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 F11P03951 625 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 GTF2IP78347 998 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 TBC1D9Q6ZT07 1266 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 UCN2Q96RP3 112 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 GPAMQ9HCL2 828 aa9.63□□□□□ -0.87
RAP1B-226ENST00000541968 H7C1W4 665 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 GPR25O00155 361 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 PSME1Q06323 249 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 PPARGC1BQ86YN6 1023 aaKnown RBP9.62□□□□□ -0.87
RAP1B-226ENST00000541968 RHBDD1Q8TEB9 315 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 GLMNQ92990 594 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 GMCL1Q96IK5 515 aa9.62□□□□□ -0.87
RAP1B-226ENST00000541968 A6NJR5 290 aa9.61□□□□□ -0.87
RAP1B-226ENST00000541968 SMTNP53814 917 aa9.61□□□□□ -0.87
RAP1B-226ENST00000541968 GTPBP3Q969Y2 492 aaKnown RBP9.61□□□□□ -0.87
RAP1B-226ENST00000541968 A0A1B0GTH6 734 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 USP17L3A6NCW0 530 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 USP17L4A6NCW7 530 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 ATP9BO43861 1147 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 FOXR1Q6PIV2 292 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 USP17L2Q6R6M4 530 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 USP17L1Q7RTZ2 530 aa9.6□□□□□ -0.87
RAP1B-226ENST00000541968 NUCKS1Q9H1E3 243 aaKnown RBP9.6□□□□□ -0.87
RAP1B-226ENST00000541968 PLA2G4AP47712 749 aa9.59□□□□□ -0.87
RAP1B-226ENST00000541968 GAS6Q14393 721 aa9.59□□□□□ -0.87
RAP1B-226ENST00000541968 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.59□□□□□ -0.87
RAP1B-226ENST00000541968 MSX1P28360 303 aa9.58□□□□□ -0.88
RAP1B-226ENST00000541968 PLEKHM2Q8IWE5 1019 aa9.58□□□□□ -0.88
RAP1B-226ENST00000541968 SLC4A9Q96Q91 983 aa9.58□□□□□ -0.88
RAP1B-226ENST00000541968 RUBCNLQ9H714 662 aa9.58□□□□□ -0.88
RAP1B-226ENST00000541968 A6NJY4 79 aa9.57□□□□□ -0.88
RAP1B-226ENST00000541968 TRIM50Q86XT4 487 aa9.57□□□□□ -0.88
RAP1B-226ENST00000541968 TRERF1Q96PN7 1200 aa9.57□□□□□ -0.88
RAP1B-226ENST00000541968 NIFKQ9BYG3 293 aaKnown RBP9.57□□□□□ -0.88
RAP1B-226ENST00000541968 ZNF358Q9NW07 568 aa9.57□□□□□ -0.88
RAP1B-226ENST00000541968 BACH1O14867 736 aa9.56□□□□□ -0.88
RAP1B-226ENST00000541968 CSB-PGBD3P0DP91 1061 aa9.56□□□□□ -0.88
RAP1B-226ENST00000541968 PGBD3Q8N328 593 aa9.56□□□□□ -0.88
RAP1B-226ENST00000541968 AIDAQ96BJ3 306 aa9.56□□□□□ -0.88
RAP1B-226ENST00000541968 CALR3Q96L12 384 aaKnown RBP9.56□□□□□ -0.88
RAP1B-226ENST00000541968 TFIP11Q9UBB9 837 aaKnown RBP9.56□□□□□ -0.88
RAP1B-226ENST00000541968 MKRN1Q9UHC7 482 aaKnown RBP9.56□□□□□ -0.88
RAP1B-226ENST00000541968 USP3Q9Y6I4 520 aa9.56□□□□□ -0.88
RAP1B-226ENST00000541968 ADAMTS2O95450 1211 aa9.55□□□□□ -0.88
RAP1B-226ENST00000541968 THBS1P07996 1170 aa9.55□□□□□ -0.88
RAP1B-226ENST00000541968 SLURP2P0DP57 97 aa9.55□□□□□ -0.88
RAP1B-226ENST00000541968 MTFR1Q15390 333 aa9.55□□□□□ -0.88
RAP1B-226ENST00000541968 TPCN2Q8NHX9 752 aa9.55□□□□□ -0.88
RAP1B-226ENST00000541968 CDK2AP1O14519 115 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 ZBTB7BO15156 539 aaPredicted RBP9.54□□□□□ -0.88
RAP1B-226ENST00000541968 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 CLDN10P78369 228 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 SRSF11Q05519 484 aaKnown RBP9.54□□□□□ -0.88
RAP1B-226ENST00000541968 CCDC102BQ68D86 513 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 DNAAF2Q9NVR5 837 aaKnown RBP9.54□□□□□ -0.88
RAP1B-226ENST00000541968 CABP1Q9NZU7 370 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 IQSEC3Q9UPP2 1182 aaPredicted RBP9.54□□□□□ -0.88
RAP1B-226ENST00000541968 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
RAP1B-226ENST00000541968 ZNF385CQ66K41 422 aaPredicted RBP9.53□□□□□ -0.88
RAP1B-226ENST00000541968 SVOPQ8N4V2 548 aa9.53□□□□□ -0.88
RAP1B-226ENST00000541968 OGFOD1Q8N543 542 aa9.53□□□□□ -0.88
RAP1B-226ENST00000541968 MBIPQ9NS73 344 aa9.53□□□□□ -0.88
RAP1B-226ENST00000541968 PALM3A6NDB9 673 aaPredicted RBP9.52□□□□□ -0.89
RAP1B-226ENST00000541968 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
RAP1B-226ENST00000541968 TNS4Q8IZW8 715 aa9.52□□□□□ -0.89
RAP1B-226ENST00000541968 SCHIP1Q9P0W5 487 aaPredicted RBP9.52□□□□□ -0.89
RAP1B-226ENST00000541968 ZNF777Q9ULD5 760 aaPredicted RBP9.52□□□□□ -0.89
RAP1B-226ENST00000541968 PARP3Q9Y6F1 533 aa9.52□□□□□ -0.89
RAP1B-226ENST00000541968 ZNF295-AS1Q8N0V1 137 aa9.51□□□□□ -0.89
RAP1B-226ENST00000541968 ZNF594Q96JF6 807 aaPredicted RBP9.51□□□□□ -0.89
RAP1B-226ENST00000541968 MAFBQ9Y5Q3 323 aaPredicted RBP9.51□□□□□ -0.89
RAP1B-226ENST00000541968 IGF1RP08069 1367 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 MX2P20592 715 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
RAP1B-226ENST00000541968 NBPF1Q3BBV0 1214 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 TBCELQ5QJ74 424 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 LARGE2Q8N3Y3 721 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 PPP1R12CQ9BZL4 782 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 CRISPLD1Q9H336 500 aa9.5□□□□□ -0.89
RAP1B-226ENST00000541968 ATP4AP20648 1035 aa9.49□□□□□ -0.89
RAP1B-226ENST00000541968 RASA1P20936 1047 aa9.49□□□□□ -0.89
RAP1B-226ENST00000541968 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
RAP1B-226ENST00000541968 LYPD4Q6UWN0 246 aa9.49□□□□□ -0.89
RAP1B-226ENST00000541968 SLC9A9Q8IVB4 645 aa9.49□□□□□ -0.89
RAP1B-226ENST00000541968 TATP17735 454 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms