RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 CFAP74Q9C0B2 1584 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 RAPGEF3O95398 923 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 USP4Q13107 963 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 ARID5BQ14865 1188 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 OXLD1Q5BKU9 147 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 KCTD15Q96SI1 283 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-220ENST00000541963 PODXL2Q9NZ53 605 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 FANCAO15360 1455 aa8.37□□□□□ -1.07
CPSF7-220ENST00000541963 PCF11O94913 1555 aaKnown RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 FAM196BA6NMK8 535 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 MYCP01106 439 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 RAB15P59190 212 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 ELOAQ14241 798 aaKnown RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 RC3H1Q5TC82 1133 aaKnown RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 B4GALNT3Q6L9W6 998 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 NOVA2Q9UNW9 492 aaKnown RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 DENND4BO75064 1496 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-220ENST00000541963 KIF14Q15058 1648 aa8.36□□□□□ -1.07
CPSF7-220ENST00000541963 SLC19A1P41440 591 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 SKOR1P84550 965 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 MMRN1Q13201 1228 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 FAM200AQ8TCP9 573 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 MAP4K5Q9Y4K4 846 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 MTUS2Q5JR59 1369 aa8.35□□□□□ -1.07
CPSF7-220ENST00000541963 ESPNB1AK53 854 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L15C9J2P7 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L10C9JJH3 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L13C9JLJ4 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L12C9JPN9 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L11C9JVI0 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L21D6R901 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L18D6R9N7 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L22D6RA61 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L17D6RBQ6 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L19D6RCP7 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L20D6RJB6 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 USP17L24Q0WX57 530 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 IFFO2Q5TF58 517 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 OGFOD1Q8N543 542 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 CCDC85AQ96PX6 553 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-220ENST00000541963 CDCA7Q9BWT1 371 aaPredicted RBP8.34□□□□□ -1.07
CPSF7-220ENST00000541963 DNAAF2Q9NVR5 837 aaKnown RBP8.34□□□□□ -1.07
CPSF7-220ENST00000541963 TTC37Q6PGP7 1564 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 MYO5CQ9NQX4 1742 aa8.34□□□□□ -1.07
CPSF7-220ENST00000541963 BRD1O95696 1058 aa8.33□□□□□ -1.08
CPSF7-220ENST00000541963 PSME1Q06323 249 aa8.33□□□□□ -1.08
CPSF7-220ENST00000541963 DHX9Q08211 1270 aaKnown RBP8.33□□□□□ -1.08
CPSF7-220ENST00000541963 TSGA10IPQ3SY00 556 aa8.33□□□□□ -1.08
CPSF7-220ENST00000541963 LRRIQ1Q96JM4 1722 aa8.33□□□□□ -1.08
CPSF7-220ENST00000541963 SCAPERQ9BY12 1400 aa8.33□□□□□ -1.08
CPSF7-220ENST00000541963 ADGRL1O94910 1474 aa8.32□□□□□ -1.08
CPSF7-220ENST00000541963 GTF2IP78347 998 aa8.32□□□□□ -1.08
CPSF7-220ENST00000541963 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
CPSF7-220ENST00000541963 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
CPSF7-220ENST00000541963 ARHGAP5Q13017 1502 aa8.32□□□□□ -1.08
CPSF7-220ENST00000541963 ARID4BQ4LE39 1312 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-220ENST00000541963 PTK7Q13308 1070 aa8.31□□□□□ -1.08
CPSF7-220ENST00000541963 CRTC2Q53ET0 693 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-220ENST00000541963 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
CPSF7-220ENST00000541963 ZNF594Q96JF6 807 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-220ENST00000541963 CFDP1Q9UEE9 299 aaPredicted RBP8.31□□□□□ -1.08
CPSF7-220ENST00000541963 CCNB3Q8WWL7 1395 aa8.31□□□□□ -1.08
CPSF7-220ENST00000541963 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
CPSF7-220ENST00000541963 KCNA1Q09470 495 aa8.3□□□□□ -1.08
CPSF7-220ENST00000541963 MPNDQ8N594 471 aa8.3□□□□□ -1.08
CPSF7-220ENST00000541963 CDK15Q96Q40 435 aa8.3□□□□□ -1.08
CPSF7-220ENST00000541963 MAGI2Q86UL8 1455 aa8.3□□□□□ -1.08
CPSF7-220ENST00000541963 ERVH48-1M5A8F1 160 aa8.29□□□□□ -1.08
CPSF7-220ENST00000541963 WNT7AO00755 349 aa8.29□□□□□ -1.08
CPSF7-220ENST00000541963 DPYDQ12882 1025 aa8.29□□□□□ -1.08
CPSF7-220ENST00000541963 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
CPSF7-220ENST00000541963 TMEM164Q5U3C3 297 aa8.29□□□□□ -1.08
CPSF7-220ENST00000541963 PLA2G2EQ9NZK7 142 aa8.29□□□□□ -1.08
CPSF7-220ENST00000541963 TMEM88BA6NKF7 163 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 FSHRP23945 695 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 SEC13P55735 322 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 NR5A1Q13285 461 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 CCDC102BQ68D86 513 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 AFAP1Q8N556 730 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 STK32AQ8WU08 396 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 RICTORQ6R327 1708 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 POGZQ7Z3K3 1410 aa8.28□□□□□ -1.08
CPSF7-220ENST00000541963 ZNF518AQ6AHZ1 1483 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 CDC42BPBQ9Y5S2 1711 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 ADH1CP00326 375 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 CLDN10P78369 228 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 CC2D2BQ6DHV5 1058 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 TPCN2Q8NHX9 752 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 ZMIZ1Q9ULJ6 1067 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 PREX2Q70Z35 1606 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 EHBP1L1Q8N3D4 1523 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 GPATCH8Q9UKJ3 1502 aaKnown RBP8.27□□□□□ -1.09
CPSF7-220ENST00000541963 FRMPD1Q5SYB0 1578 aa8.27□□□□□ -1.09
CPSF7-220ENST00000541963 PLEKHH2Q8IVE3 1493 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 ZMYM4Q5VZL5 1548 aa8.26□□□□□ -1.09
CPSF7-220ENST00000541963 ZFYVE16Q7Z3T8 1539 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms